RNA–Protein interactions for RNA: ENST00000529389.5

RELA-215, Transcript of RELA proto-oncogene, NF-kB subunit, humanhuman

TSL 3

Gene RELA, Length 992 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RELA-215ENST00000529389 NISCHQ9Y2I1 1504 aa42.74■■■■■ 4.43
RELA-215ENST00000529389 CCDC180Q9P1Z9 1646 aa38.04■■■■□ 3.68
RELA-215ENST00000529389 ABCC9O60706 1549 aa37.56■■■■□ 3.6
RELA-215ENST00000529389 DCAF8L2P0C7V8 631 aa36.01■■■■□ 3.36
RELA-215ENST00000529389 RB1CC1Q8TDY2 1594 aa36.01■■■■□ 3.35
RELA-215ENST00000529389 NACADO15069 1562 aa35.9■■■■□ 3.34
RELA-215ENST00000529389 MYO15BQ96JP2 1530 aa35.6■■■■□ 3.29
RELA-215ENST00000529389 ZCCHC6Q5VYS8 1495 aaKnown RBP35.53■■■■□ 3.28
RELA-215ENST00000529389 DCAF1Q9Y4B6 1507 aa35.34■■■■□ 3.25
RELA-215ENST00000529389 PABPN1Q86U42 306 aaKnown RBP eCLIP35.12■■■■□ 3.21
RELA-215ENST00000529389 UNC13AQ9UPW8 1703 aa35.03■■■■□ 3.2
RELA-215ENST00000529389 BICRAQ9NZM4 1560 aa34.84■■■■□ 3.17
RELA-215ENST00000529389 SCRIBQ14160 1630 aa34.73■■■■□ 3.15
RELA-215ENST00000529389 DNAJC5BQ9UF47 199 aa34.71■■■■□ 3.15
RELA-215ENST00000529389 SHROOM4Q9ULL8 1493 aa34.52■■■■□ 3.12
RELA-215ENST00000529389 EIF4G1Q04637 1599 aaKnown RBP33.99■■■■□ 3.03
RELA-215ENST00000529389 CC2D2AQ9P2K1 1620 aa33.92■■■■□ 3.02
RELA-215ENST00000529389 CECR2Q9BXF3 1484 aa33.79■■■■□ 3
RELA-215ENST00000529389 SMARCA4P51532 1647 aa33.18■■■□□ 2.9
RELA-215ENST00000529389 BAZ1AQ9NRL2 1556 aaPredicted RBP33.16■■■□□ 2.9
RELA-215ENST00000529389 NCAPD3P42695 1498 aa33.15■■■□□ 2.9
RELA-215ENST00000529389 ATAD2BQ9ULI0 1458 aa33.12■■■□□ 2.89
RELA-215ENST00000529389 SMARCA2P51531 1590 aa33.07■■■□□ 2.88
RELA-215ENST00000529389 HMGXB3Q12766 1538 aa32.92■■■□□ 2.86
RELA-215ENST00000529389 MROH2BQ7Z745 1585 aa32.92■■■□□ 2.86
RELA-215ENST00000529389 PEG3Q9GZU2 1588 aa32.86■■■□□ 2.85
RELA-215ENST00000529389 BAZ1BQ9UIG0 1483 aaKnown RBP32.86■■■□□ 2.85
RELA-215ENST00000529389 WIZO95785 1651 aa32.53■■■□□ 2.8
RELA-215ENST00000529389 RSF1Q96T23 1441 aaPredicted RBP32.49■■■□□ 2.79
RELA-215ENST00000529389 ERCC6Q03468 1493 aa32.45■■■□□ 2.79
RELA-215ENST00000529389 NESP48681 1621 aa32.39■■■□□ 2.78
RELA-215ENST00000529389 LAMC3Q9Y6N6 1575 aa32.29■■■□□ 2.76
RELA-215ENST00000529389 CADPSQ9ULU8 1353 aa32.21■■■□□ 2.75
RELA-215ENST00000529389 TOP2AP11388 1531 aaKnown RBP32.2■■■□□ 2.74
RELA-215ENST00000529389 PDS5BQ9NTI5 1447 aa32.17■■■□□ 2.74
RELA-215ENST00000529389 CUX2O14529 1486 aa32.15■■■□□ 2.74
RELA-215ENST00000529389 KIF21AQ7Z4S6 1674 aa31.93■■■□□ 2.7
RELA-215ENST00000529389 CFTRP13569 1480 aa31.92■■■□□ 2.7
RELA-215ENST00000529389 THOC2Q8NI27 1593 aaKnown RBP31.9■■■□□ 2.7
RELA-215ENST00000529389 CCDC88BA6NC98 1476 aa31.85■■■□□ 2.69
RELA-215ENST00000529389 FANCD2Q9BXW9 1451 aa31.81■■■□□ 2.68
RELA-215ENST00000529389 CEP164Q9UPV0 1460 aa31.79■■■□□ 2.68
RELA-215ENST00000529389 MRC2Q9UBG0 1479 aa31.78■■■□□ 2.68
RELA-215ENST00000529389 WDR62O43379 1518 aa31.65■■■□□ 2.66
RELA-215ENST00000529389 SUPT5HO00267 1087 aaKnown RBP31.61■■■□□ 2.65
RELA-215ENST00000529389 PRDM2Q13029 1718 aa31.52■■■□□ 2.64
RELA-215ENST00000529389 DNAJC5Q9H3Z4 198 aa31.51■■■□□ 2.63
RELA-215ENST00000529389 URB2Q14146 1524 aaKnown RBP31.46■■■□□ 2.63
RELA-215ENST00000529389 ABCC8Q09428 1581 aa31.3■■■□□ 2.6
RELA-215ENST00000529389 TOPBP1Q92547 1522 aa31.25■■■□□ 2.59
RELA-215ENST00000529389 DNMBPQ6XZF7 1577 aa31.17■■■□□ 2.58
RELA-215ENST00000529389 IFT140Q96RY7 1462 aa31.15■■■□□ 2.58
RELA-215ENST00000529389 ZNF608Q9ULD9 1512 aaPredicted RBP30.98■■■□□ 2.55
RELA-215ENST00000529389 POLA1P09884 1462 aaPredicted RBP30.96■■■□□ 2.55
RELA-215ENST00000529389 SOGA1O94964 1423 aa30.9■■■□□ 2.54
RELA-215ENST00000529389 CUX1P39880 1505 aa30.89■■■□□ 2.54
RELA-215ENST00000529389 OSCARQ8IYS5 282 aa30.88■■■□□ 2.53
RELA-215ENST00000529389 TARBP1Q13395 1621 aaKnown RBP30.87■■■□□ 2.53
RELA-215ENST00000529389 FGD5Q6ZNL6 1462 aa30.86■■■□□ 2.53
RELA-215ENST00000529389 RAD54L2Q9Y4B4 1467 aa30.85■■■□□ 2.53
RELA-215ENST00000529389 AQRO60306 1485 aaKnown RBP eCLIP30.82■■■□□ 2.533e-8■■■■■ 30.1
RELA-215ENST00000529389 EIF4G3O43432 1585 aaKnown RBP30.81■■■□□ 2.52
RELA-215ENST00000529389 TDRD9Q8NDG6 1382 aaKnown RBP30.76■■■□□ 2.51
RELA-215ENST00000529389 WRNQ14191 1432 aaPredicted RBP eCLIP30.68■■■□□ 2.5
RELA-215ENST00000529389 WDR97A6NE52 1622 aa30.65■■■□□ 2.5
RELA-215ENST00000529389 FBLN2P98095 1184 aa30.62■■■□□ 2.49
RELA-215ENST00000529389 TOP2BQ02880 1626 aa30.56■■■□□ 2.48
RELA-215ENST00000529389 ABCA10Q8WWZ4 1543 aa30.55■■■□□ 2.48
RELA-215ENST00000529389 GRIN2BQ13224 1484 aa30.55■■■□□ 2.48
RELA-215ENST00000529389 BIVM-ERCC5R4GMW8 1640 aa30.53■■■□□ 2.48
RELA-215ENST00000529389 SYNJ1O43426 1573 aa30.52■■■□□ 2.48
RELA-215ENST00000529389 GAPVD1Q14C86 1478 aa30.51■■■□□ 2.48
RELA-215ENST00000529389 SNAPC4Q5SXM2 1469 aa30.5■■■□□ 2.47
RELA-215ENST00000529389 CHMP7Q8WUX9 453 aaPredicted RBP30.49■■■□□ 2.47
RELA-215ENST00000529389 MAGI1Q96QZ7 1491 aaPredicted RBP30.48■■■□□ 2.47
RELA-215ENST00000529389 CHD1O14646 1710 aa30.44■■■□□ 2.46
RELA-215ENST00000529389 TRIM41Q8WV44 630 aa30.42■■■□□ 2.46
RELA-215ENST00000529389 ABCA5Q8WWZ7 1642 aa30.39■■■□□ 2.46
RELA-215ENST00000529389 SYNJ2O15056 1496 aa30.36■■■□□ 2.45
RELA-215ENST00000529389 PBRM1Q86U86 1689 aa30.35■■■□□ 2.45
RELA-215ENST00000529389 ARHGEF11O15085 1522 aa30.25■■■□□ 2.43
RELA-215ENST00000529389 RIMBP3CA6NJZ7 1639 aa30.25■■■□□ 2.43
RELA-215ENST00000529389 RIMBP3BA6NNM3 1639 aa30.25■■■□□ 2.43
RELA-215ENST00000529389 RIMBP3Q9UFD9 1639 aa30.25■■■□□ 2.43
RELA-215ENST00000529389 ERICH3Q5RHP9 1530 aa30.18■■■□□ 2.42
RELA-215ENST00000529389 FHAD1B1AJZ9 1412 aa30.17■■■□□ 2.42
RELA-215ENST00000529389 CLASP1Q7Z460 1538 aa30.14■■■□□ 2.42
RELA-215ENST00000529389 ADAMTS12P58397 1594 aa30.13■■■□□ 2.41
RELA-215ENST00000529389 GRIN2AQ12879 1464 aa30.12■■■□□ 2.41
RELA-215ENST00000529389 CYB5RLQ6IPT4 315 aa30.11■■■□□ 2.41
RELA-215ENST00000529389 KIF27Q86VH2 1401 aa30.09■■■□□ 2.41
RELA-215ENST00000529389 NUP160Q12769 1436 aa29.99■■■□□ 2.39
RELA-215ENST00000529389 IGF1RP08069 1367 aa29.98■■■□□ 2.39
RELA-215ENST00000529389 ARAP1Q96P48 1450 aa29.98■■■□□ 2.39
RELA-215ENST00000529389 CEP170Q5SW79 1584 aa29.94■■■□□ 2.38
RELA-215ENST00000529389 CUL7Q14999 1698 aa29.83■■■□□ 2.37
RELA-215ENST00000529389 CARMIL1Q5VZK9 1371 aa29.82■■■□□ 2.36
RELA-215ENST00000529389 JPH4Q96JJ6 628 aa29.79■■■□□ 2.36
RELA-215ENST00000529389 SHROOM2Q13796 1616 aa29.73■■■□□ 2.35
RELA-215ENST00000529389 PRG4Q92954 1404 aaPredicted RBP29.71■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms