RNA–Protein interactions for RNA: ENST00000526283.6

RELA-208, Transcript of RELA proto-oncogene, NF-kB subunit, humanhuman

TSL 5

Gene RELA, Length 2,004 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RELA-208ENST00000526283 NISCHQ9Y2I1 1504 aa30.9■■■□□ 2.54
RELA-208ENST00000526283 CCDC180Q9P1Z9 1646 aa26.76■■□□□ 1.87
RELA-208ENST00000526283 ZCCHC6Q5VYS8 1495 aaKnown RBP26■■□□□ 1.75
RELA-208ENST00000526283 DCAF8L2P0C7V8 631 aa25.58■■□□□ 1.69
RELA-208ENST00000526283 DCAF1Q9Y4B6 1507 aa25.5■■□□□ 1.67
RELA-208ENST00000526283 SHROOM4Q9ULL8 1493 aa25.5■■□□□ 1.67
RELA-208ENST00000526283 ABCC9O60706 1549 aa25.18■■□□□ 1.62
RELA-208ENST00000526283 MYO15BQ96JP2 1530 aa25.1■■□□□ 1.61
RELA-208ENST00000526283 NACADO15069 1562 aa24.9■■□□□ 1.58
RELA-208ENST00000526283 SCRIBQ14160 1630 aa24.73■■□□□ 1.55
RELA-208ENST00000526283 SUPT5HO00267 1087 aaKnown RBP24.68■■□□□ 1.54
RELA-208ENST00000526283 RB1CC1Q8TDY2 1594 aa24.64■■□□□ 1.53
RELA-208ENST00000526283 RSF1Q96T23 1441 aaPredicted RBP24.09■■□□□ 1.45
RELA-208ENST00000526283 UNC13AQ9UPW8 1703 aa24.08■■□□□ 1.45
RELA-208ENST00000526283 CECR2Q9BXF3 1484 aa24.01■■□□□ 1.43
RELA-208ENST00000526283 MROH2BQ7Z745 1585 aa23.89■■□□□ 1.42
RELA-208ENST00000526283 BICRAQ9NZM4 1560 aa23.86■■□□□ 1.41
RELA-208ENST00000526283 PABPN1Q86U42 306 aaKnown RBP eCLIP23.84■■□□□ 1.414e-10■□□□□ 10.7
RELA-208ENST00000526283 BAZ1AQ9NRL2 1556 aaPredicted RBP23.84■■□□□ 1.41
RELA-208ENST00000526283 CHIC1Q5VXU3 224 aa23.71■■□□□ 1.39
RELA-208ENST00000526283 WIZO95785 1651 aa23.7■■□□□ 1.38
RELA-208ENST00000526283 SMARCA4P51532 1647 aa23.68■■□□□ 1.38
RELA-208ENST00000526283 TOP2AP11388 1531 aaKnown RBP23.46■■□□□ 1.35
RELA-208ENST00000526283 PEG3Q9GZU2 1588 aa23.35■■□□□ 1.33
RELA-208ENST00000526283 ATAD2BQ9ULI0 1458 aa23.26■■□□□ 1.31
RELA-208ENST00000526283 CCDC88BA6NC98 1476 aa23.25■■□□□ 1.31
RELA-208ENST00000526283 SMARCA2P51531 1590 aa23.24■■□□□ 1.31
RELA-208ENST00000526283 TRIM41Q8WV44 630 aa23.17■■□□□ 1.3
RELA-208ENST00000526283 BAZ1BQ9UIG0 1483 aaKnown RBP23.16■■□□□ 1.3
RELA-208ENST00000526283 EIF4G1Q04637 1599 aaKnown RBP23.15■■□□□ 1.3
RELA-208ENST00000526283 NCAPD3P42695 1498 aa22.99■■□□□ 1.27
RELA-208ENST00000526283 HMGXB3Q12766 1538 aa22.97■■□□□ 1.27
RELA-208ENST00000526283 ABCC8Q09428 1581 aa22.86■■□□□ 1.25
RELA-208ENST00000526283 LOC105371045A0A1W2PR82 267 aa22.85■■□□□ 1.25
RELA-208ENST00000526283 HRCP23327 699 aa22.81■■□□□ 1.24
RELA-208ENST00000526283 FAM9AQ8IZU1 332 aaPredicted RBP22.79■■□□□ 1.24
RELA-208ENST00000526283 CC2D2AQ9P2K1 1620 aa22.74■■□□□ 1.23
RELA-208ENST00000526283 PELP1Q8IZL8 1130 aaKnown RBP22.72■■□□□ 1.23
RELA-208ENST00000526283 WRNQ14191 1432 aaPredicted RBP eCLIP22.69■■□□□ 1.22
RELA-208ENST00000526283 CFTRP13569 1480 aa22.57■■□□□ 1.2
RELA-208ENST00000526283 SYNJ1O43426 1573 aa22.55■■□□□ 1.2
RELA-208ENST00000526283 SOGA1O94964 1423 aa22.5■■□□□ 1.19
RELA-208ENST00000526283 EHMT2Q96KQ7 1210 aa22.49■■□□□ 1.19
RELA-208ENST00000526283 EEA1Q15075 1411 aa22.49■■□□□ 1.19
RELA-208ENST00000526283 CADPSQ9ULU8 1353 aa22.46■■□□□ 1.19
RELA-208ENST00000526283 TOP2BQ02880 1626 aa22.43■■□□□ 1.18
RELA-208ENST00000526283 PRDM2Q13029 1718 aa22.38■■□□□ 1.17
RELA-208ENST00000526283 RUSC2Q8N2Y8 1516 aa22.38■■□□□ 1.17
RELA-208ENST00000526283 CSRNP3Q8WYN3 585 aa22.38■■□□□ 1.17
RELA-208ENST00000526283 BIVM-ERCC5R4GMW8 1640 aa22.37■■□□□ 1.17
RELA-208ENST00000526283 CUX1P39880 1505 aa22.32■■□□□ 1.16
RELA-208ENST00000526283 FANCD2Q9BXW9 1451 aa22.21■■□□□ 1.15
RELA-208ENST00000526283 GOLGA3Q08378 1498 aa22.2■■□□□ 1.14
RELA-208ENST00000526283 TNIKQ9UKE5 1360 aa22.18■■□□□ 1.14
RELA-208ENST00000526283 CEP164Q9UPV0 1460 aa22.18■■□□□ 1.14
RELA-208ENST00000526283 NESP48681 1621 aa22.18■■□□□ 1.14
RELA-208ENST00000526283 UBTFP17480 764 aaKnown RBP22.16■■□□□ 1.14
RELA-208ENST00000526283 LAMC3Q9Y6N6 1575 aa22.16■■□□□ 1.14
RELA-208ENST00000526283 KIF21BO75037 1637 aa22.15■■□□□ 1.14
RELA-208ENST00000526283 DNAJC5BQ9UF47 199 aa22.14■■□□□ 1.13
RELA-208ENST00000526283 PCGF6Q9BYE7 350 aa22.11■■□□□ 1.13
RELA-208ENST00000526283 KIF27Q86VH2 1401 aa22.1■■□□□ 1.13
RELA-208ENST00000526283 CEP162Q5TB80 1403 aa22.09■■□□□ 1.13
RELA-208ENST00000526283 FGD5Q6ZNL6 1462 aa22.05■■□□□ 1.12
RELA-208ENST00000526283 MYT1Q01538 1121 aa22.05■■□□□ 1.12
RELA-208ENST00000526283 PDS5BQ9NTI5 1447 aa22.03■■□□□ 1.12
RELA-208ENST00000526283 DNMBPQ6XZF7 1577 aa22.03■■□□□ 1.12
RELA-208ENST00000526283 RAPGEF2Q9Y4G8 1499 aa22.02■■□□□ 1.12
RELA-208ENST00000526283 TRIM26Q12899 539 aaPredicted RBP22.01■■□□□ 1.11
RELA-208ENST00000526283 TOPBP1Q92547 1522 aa21.98■■□□□ 1.11
RELA-208ENST00000526283 CUX2O14529 1486 aa21.98■■□□□ 1.11
RELA-208ENST00000526283 PRXQ9BXM0 1461 aa21.98■■□□□ 1.11
RELA-208ENST00000526283 ERICH3Q5RHP9 1530 aa21.96■■□□□ 1.11
RELA-208ENST00000526283 PPARGC1BQ86YN6 1023 aaKnown RBP21.94■■□□□ 1.1
RELA-208ENST00000526283 POLA1P09884 1462 aaPredicted RBP21.91■■□□□ 1.1
RELA-208ENST00000526283 URB2Q14146 1524 aaKnown RBP21.9■■□□□ 1.1
RELA-208ENST00000526283 CLIP1P30622 1438 aa21.88■■□□□ 1.09
RELA-208ENST00000526283 IGF1RP08069 1367 aa21.86■■□□□ 1.09
RELA-208ENST00000526283 KIF21AQ7Z4S6 1674 aa21.85■■□□□ 1.09
RELA-208ENST00000526283 RAD54L2Q9Y4B4 1467 aa21.85■■□□□ 1.09
RELA-208ENST00000526283 ABCA10Q8WWZ4 1543 aa21.85■■□□□ 1.09
RELA-208ENST00000526283 CARMIL1Q5VZK9 1371 aa21.78■■□□□ 1.08
RELA-208ENST00000526283 RANGAP1P46060 587 aaPredicted RBP21.76■■□□□ 1.07
RELA-208ENST00000526283 MRC2Q9UBG0 1479 aa21.71■■□□□ 1.07
RELA-208ENST00000526283 VPS8Q8N3P4 1428 aa21.71■■□□□ 1.07
RELA-208ENST00000526283 WDR97A6NE52 1622 aa21.69■■□□□ 1.06
RELA-208ENST00000526283 TDRD9Q8NDG6 1382 aaKnown RBP21.64■■□□□ 1.06
RELA-208ENST00000526283 CUL7Q14999 1698 aa21.63■■□□□ 1.05
RELA-208ENST00000526283 ABCA5Q8WWZ7 1642 aa21.62■■□□□ 1.05
RELA-208ENST00000526283 GAPVD1Q14C86 1478 aa21.61■■□□□ 1.05
RELA-208ENST00000526283 TARBP1Q13395 1621 aaKnown RBP21.6■■□□□ 1.05
RELA-208ENST00000526283 ARAP1Q96P48 1450 aa21.59■■□□□ 1.05
RELA-208ENST00000526283 TTBK1Q5TCY1 1321 aaPredicted RBP21.59■■□□□ 1.05
RELA-208ENST00000526283 ERCC6Q03468 1493 aa21.59■■□□□ 1.05
RELA-208ENST00000526283 SCAF1Q9H7N4 1312 aaKnown RBP21.58■■□□□ 1.05
RELA-208ENST00000526283 APLP2Q06481 763 aa21.58■■□□□ 1.04
RELA-208ENST00000526283 WDR62O43379 1518 aa21.57■■□□□ 1.04
RELA-208ENST00000526283 ZEB1P37275 1124 aaPredicted RBP21.55■■□□□ 1.04
RELA-208ENST00000526283 ARHGAP35Q9NRY4 1499 aa21.55■■□□□ 1.04
RELA-208ENST00000526283 IFT140Q96RY7 1462 aa21.49■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms