RNA–Protein interactions for RNA: ENST00000533187.5

RELA-221, Transcript of RELA proto-oncogene, NF-kB subunit, humanhuman

TSL 3

Gene RELA, Length 456 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RELA-221ENST00000533187 NISCHQ9Y2I1 1504 aa46.74■■■■■ 5.07
RELA-221ENST00000533187 ABCC9O60706 1549 aa43.1■■■■■ 4.49
RELA-221ENST00000533187 CCDC180Q9P1Z9 1646 aa42.19■■■■■ 4.34
RELA-221ENST00000533187 DNAJC5BQ9UF47 199 aa41.29■■■■■ 4.2
RELA-221ENST00000533187 RB1CC1Q8TDY2 1594 aa40.59■■■■■ 4.09
RELA-221ENST00000533187 NACADO15069 1562 aa40.14■■■■■ 4.02
RELA-221ENST00000533187 PABPN1Q86U42 306 aaKnown RBP eCLIP40.05■■■■■ 4
RELA-221ENST00000533187 DCAF8L2P0C7V8 631 aa39.78■■■■□ 3.96
RELA-221ENST00000533187 UNC13AQ9UPW8 1703 aa39.62■■■■□ 3.93
RELA-221ENST00000533187 BICRAQ9NZM4 1560 aa39.53■■■■□ 3.92
RELA-221ENST00000533187 MYO15BQ96JP2 1530 aa39.35■■■■□ 3.89
RELA-221ENST00000533187 CECR2Q9BXF3 1484 aa38.91■■■■□ 3.82
RELA-221ENST00000533187 CC2D2AQ9P2K1 1620 aa38.85■■■■□ 3.81
RELA-221ENST00000533187 SHROOM4Q9ULL8 1493 aa38.85■■■■□ 3.81
RELA-221ENST00000533187 EIF4G1Q04637 1599 aaKnown RBP38.58■■■■□ 3.77
RELA-221ENST00000533187 ZCCHC6Q5VYS8 1495 aaKnown RBP38.56■■■■□ 3.76
RELA-221ENST00000533187 DCAF1Q9Y4B6 1507 aa38.53■■■■□ 3.76
RELA-221ENST00000533187 DNAJC5Q9H3Z4 198 aa38.45■■■■□ 3.75
RELA-221ENST00000533187 SCRIBQ14160 1630 aa38.45■■■■□ 3.75
RELA-221ENST00000533187 CUX2O14529 1486 aa37.45■■■■□ 3.59
RELA-221ENST00000533187 ERCC6Q03468 1493 aa37.22■■■■□ 3.55
RELA-221ENST00000533187 NCAPD3P42695 1498 aa37.13■■■■□ 3.53
RELA-221ENST00000533187 ATAD2BQ9ULI0 1458 aa36.9■■■■□ 3.5
RELA-221ENST00000533187 NESP48681 1621 aa36.82■■■■□ 3.49
RELA-221ENST00000533187 HMGXB3Q12766 1538 aa36.72■■■■□ 3.47
RELA-221ENST00000533187 SMARCA2P51531 1590 aa36.68■■■■□ 3.46
RELA-221ENST00000533187 SMARCA4P51532 1647 aa36.59■■■■□ 3.45
RELA-221ENST00000533187 THOC2Q8NI27 1593 aaKnown RBP36.56■■■■□ 3.44
RELA-221ENST00000533187 BAZ1BQ9UIG0 1483 aaKnown RBP36.44■■■■□ 3.42
RELA-221ENST00000533187 TRIM41Q8WV44 630 aa36.37■■■■□ 3.41
RELA-221ENST00000533187 LAMC3Q9Y6N6 1575 aa36.34■■■■□ 3.41
RELA-221ENST00000533187 BAZ1AQ9NRL2 1556 aaPredicted RBP36.28■■■■□ 3.4
RELA-221ENST00000533187 PEG3Q9GZU2 1588 aa36.27■■■■□ 3.4
RELA-221ENST00000533187 KIF21AQ7Z4S6 1674 aa36.2■■■■□ 3.39
RELA-221ENST00000533187 PDS5BQ9NTI5 1447 aa36.19■■■■□ 3.38
RELA-221ENST00000533187 MROH2BQ7Z745 1585 aa36.03■■■■□ 3.36
RELA-221ENST00000533187 CADPSQ9ULU8 1353 aa35.96■■■■□ 3.35
RELA-221ENST00000533187 MRC2Q9UBG0 1479 aa35.94■■■■□ 3.34
RELA-221ENST00000533187 WDR62O43379 1518 aa35.88■■■■□ 3.33
RELA-221ENST00000533187 OSCARQ8IYS5 282 aa35.63■■■■□ 3.29
RELA-221ENST00000533187 CEP164Q9UPV0 1460 aa35.61■■■■□ 3.29
RELA-221ENST00000533187 FANCD2Q9BXW9 1451 aa35.54■■■■□ 3.28
RELA-221ENST00000533187 WIZO95785 1651 aa35.49■■■■□ 3.27
RELA-221ENST00000533187 CFTRP13569 1480 aa35.38■■■■□ 3.25
RELA-221ENST00000533187 URB2Q14146 1524 aaKnown RBP35.32■■■■□ 3.25
RELA-221ENST00000533187 RIMBP3CA6NJZ7 1639 aa35.23■■■■□ 3.23
RELA-221ENST00000533187 RIMBP3BA6NNM3 1639 aa35.23■■■■□ 3.23
RELA-221ENST00000533187 RIMBP3Q9UFD9 1639 aa35.23■■■■□ 3.23
RELA-221ENST00000533187 ARHGEF11O15085 1522 aa35.06■■■■□ 3.2
RELA-221ENST00000533187 ZNF608Q9ULD9 1512 aaPredicted RBP35.04■■■■□ 3.2
RELA-221ENST00000533187 RSF1Q96T23 1441 aaPredicted RBP35■■■■□ 3.19
RELA-221ENST00000533187 TOP2AP11388 1531 aaKnown RBP35■■■■□ 3.19
RELA-221ENST00000533187 IFT140Q96RY7 1462 aa34.95■■■■□ 3.19
RELA-221ENST00000533187 CYB5RLQ6IPT4 315 aa34.88■■■■□ 3.17
RELA-221ENST00000533187 TOPBP1Q92547 1522 aa34.77■■■■□ 3.16
RELA-221ENST00000533187 PRDM2Q13029 1718 aa34.76■■■■□ 3.16
RELA-221ENST00000533187 EIF4G3O43432 1585 aaKnown RBP34.71■■■■□ 3.15
RELA-221ENST00000533187 TRHP20396 242 aaPredicted RBP34.71■■■■□ 3.15
RELA-221ENST00000533187 ARAP1Q96P48 1450 aa34.69■■■■□ 3.14
RELA-221ENST00000533187 CCDC88BA6NC98 1476 aa34.66■■■■□ 3.14
RELA-221ENST00000533187 AQRO60306 1485 aaKnown RBP eCLIP34.6■■■■□ 3.131e-9■■■■■ 37.3
RELA-221ENST00000533187 ABCC8Q09428 1581 aa34.57■■■■□ 3.13
RELA-221ENST00000533187 CHD1O14646 1710 aa34.56■■■■□ 3.12
RELA-221ENST00000533187 DNMBPQ6XZF7 1577 aa34.53■■■■□ 3.12
RELA-221ENST00000533187 TARBP1Q13395 1621 aaKnown RBP34.51■■■■□ 3.11
RELA-221ENST00000533187 FBLN2P98095 1184 aa34.49■■■■□ 3.11
RELA-221ENST00000533187 POLA1P09884 1462 aaPredicted RBP34.37■■■■□ 3.09
RELA-221ENST00000533187 RAD54L2Q9Y4B4 1467 aa34.28■■■■□ 3.08
RELA-221ENST00000533187 TDRD9Q8NDG6 1382 aaKnown RBP34.27■■■■□ 3.08
RELA-221ENST00000533187 AEBP2Q6ZN18 517 aaPredicted RBP34.26■■■■□ 3.08
RELA-221ENST00000533187 CLASP1Q7Z460 1538 aa34.24■■■■□ 3.07
RELA-221ENST00000533187 SOGA1O94964 1423 aa34.2■■■■□ 3.06
RELA-221ENST00000533187 SNAPC4Q5SXM2 1469 aa34.2■■■■□ 3.06
RELA-221ENST00000533187 CHMP7Q8WUX9 453 aaPredicted RBP34.11■■■■□ 3.05
RELA-221ENST00000533187 SYNJ1O43426 1573 aa34.07■■■■□ 3.05
RELA-221ENST00000533187 MAGI1Q96QZ7 1491 aaPredicted RBP34.05■■■■□ 3.04
RELA-221ENST00000533187 WDR97A6NE52 1622 aa34.03■■■■□ 3.04
RELA-221ENST00000533187 FGD5Q6ZNL6 1462 aa34.02■■■■□ 3.04
RELA-221ENST00000533187 GRIN2BQ13224 1484 aa33.97■■■■□ 3.03
RELA-221ENST00000533187 SYNJ2O15056 1496 aa33.96■■■■□ 3.03
RELA-221ENST00000533187 GAPVD1Q14C86 1478 aa33.93■■■■□ 3.02
RELA-221ENST00000533187 CUX1P39880 1505 aa33.89■■■■□ 3.02
RELA-221ENST00000533187 PBRM1Q86U86 1689 aa33.69■■■□□ 2.98
RELA-221ENST00000533187 ERCC6L2Q5T890 1561 aa33.68■■■□□ 2.98
RELA-221ENST00000533187 ABCA10Q8WWZ4 1543 aa33.6■■■□□ 2.97
RELA-221ENST00000533187 ABCA5Q8WWZ7 1642 aa33.59■■■□□ 2.97
RELA-221ENST00000533187 GRIN2AQ12879 1464 aa33.54■■■□□ 2.96
RELA-221ENST00000533187 CEP170Q5SW79 1584 aa33.51■■■□□ 2.96
RELA-221ENST00000533187 NUP160Q12769 1436 aa33.5■■■□□ 2.95
RELA-221ENST00000533187 ADAMTS12P58397 1594 aa33.39■■■□□ 2.94
RELA-221ENST00000533187 SHROOM2Q13796 1616 aa33.39■■■□□ 2.93
RELA-221ENST00000533187 KIF13AQ9H1H9 1805 aa33.34■■■□□ 2.93
RELA-221ENST00000533187 FHAD1B1AJZ9 1412 aa33.29■■■□□ 2.92
RELA-221ENST00000533187 WRNQ14191 1432 aaPredicted RBP eCLIP33.28■■■□□ 2.92
RELA-221ENST00000533187 PRG4Q92954 1404 aaPredicted RBP33.22■■■□□ 2.91
RELA-221ENST00000533187 FAM69CQ0P6D2 419 aa33.17■■■□□ 2.9
RELA-221ENST00000533187 ABCC10Q5T3U5 1492 aa33.16■■■□□ 2.9
RELA-221ENST00000533187 JPH4Q96JJ6 628 aa33.15■■■□□ 2.9
RELA-221ENST00000533187 ERICH3Q5RHP9 1530 aa33.12■■■□□ 2.89
RELA-221ENST00000533187 KDM4FA0A1W2PPD8 638 aa33.1■■■□□ 2.89
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms