RNA–Protein interactions for RNA: ENST00000534305.1

RELA-224, Transcript of RELA proto-oncogene, NF-kB subunit, humanhuman

TSL 3

Gene RELA, Length 666 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RELA-224ENST00000534305 NISCHQ9Y2I1 1504 aa42.73■■■■■ 4.43
RELA-224ENST00000534305 ABCC9O60706 1549 aa38.91■■■■□ 3.82
RELA-224ENST00000534305 CCDC180Q9P1Z9 1646 aa38.77■■■■□ 3.8
RELA-224ENST00000534305 RB1CC1Q8TDY2 1594 aa37.04■■■■□ 3.52
RELA-224ENST00000534305 NACADO15069 1562 aa36.66■■■■□ 3.46
RELA-224ENST00000534305 DNAJC5BQ9UF47 199 aa36.65■■■■□ 3.46
RELA-224ENST00000534305 UNC13AQ9UPW8 1703 aa36.21■■■■□ 3.39
RELA-224ENST00000534305 DCAF8L2P0C7V8 631 aa36.05■■■■□ 3.36
RELA-224ENST00000534305 MYO15BQ96JP2 1530 aa36.04■■■■□ 3.36
RELA-224ENST00000534305 PABPN1Q86U42 306 aaKnown RBP eCLIP36■■■■□ 3.35
RELA-224ENST00000534305 BICRAQ9NZM4 1560 aa35.83■■■■□ 3.33
RELA-224ENST00000534305 SHROOM4Q9ULL8 1493 aa35.57■■■■□ 3.28
RELA-224ENST00000534305 DCAF1Q9Y4B6 1507 aa35.39■■■■□ 3.26
RELA-224ENST00000534305 ZCCHC6Q5VYS8 1495 aaKnown RBP35.36■■■■□ 3.25
RELA-224ENST00000534305 CC2D2AQ9P2K1 1620 aa35.22■■■■□ 3.23
RELA-224ENST00000534305 CECR2Q9BXF3 1484 aa35.16■■■■□ 3.22
RELA-224ENST00000534305 SCRIBQ14160 1630 aa35.11■■■■□ 3.21
RELA-224ENST00000534305 EIF4G1Q04637 1599 aaKnown RBP35.06■■■■□ 3.2
RELA-224ENST00000534305 DNAJC5Q9H3Z4 198 aa34.16■■■■□ 3.06
RELA-224ENST00000534305 CUX2O14529 1486 aa33.9■■■■□ 3.02
RELA-224ENST00000534305 ERCC6Q03468 1493 aa33.76■■■□□ 2.99
RELA-224ENST00000534305 NCAPD3P42695 1498 aa33.74■■■□□ 2.99
RELA-224ENST00000534305 SMARCA2P51531 1590 aa33.59■■■□□ 2.97
RELA-224ENST00000534305 HMGXB3Q12766 1538 aa33.58■■■□□ 2.97
RELA-224ENST00000534305 ATAD2BQ9ULI0 1458 aa33.55■■■□□ 2.96
RELA-224ENST00000534305 SMARCA4P51532 1647 aa33.5■■■□□ 2.95
RELA-224ENST00000534305 BAZ1AQ9NRL2 1556 aaPredicted RBP33.3■■■□□ 2.92
RELA-224ENST00000534305 BAZ1BQ9UIG0 1483 aaKnown RBP33.28■■■□□ 2.92
RELA-224ENST00000534305 NESP48681 1621 aa33.25■■■□□ 2.91
RELA-224ENST00000534305 PEG3Q9GZU2 1588 aa33.21■■■□□ 2.91
RELA-224ENST00000534305 THOC2Q8NI27 1593 aaKnown RBP33.2■■■□□ 2.91
RELA-224ENST00000534305 LAMC3Q9Y6N6 1575 aa33.19■■■□□ 2.9
RELA-224ENST00000534305 KIF21AQ7Z4S6 1674 aa33.01■■■□□ 2.87
RELA-224ENST00000534305 PDS5BQ9NTI5 1447 aa32.94■■■□□ 2.86
RELA-224ENST00000534305 MROH2BQ7Z745 1585 aa32.85■■■□□ 2.85
RELA-224ENST00000534305 MRC2Q9UBG0 1479 aa32.67■■■□□ 2.82
RELA-224ENST00000534305 CADPSQ9ULU8 1353 aa32.66■■■□□ 2.82
RELA-224ENST00000534305 WDR62O43379 1518 aa32.63■■■□□ 2.81
RELA-224ENST00000534305 WIZO95785 1651 aa32.49■■■□□ 2.79
RELA-224ENST00000534305 CEP164Q9UPV0 1460 aa32.48■■■□□ 2.79
RELA-224ENST00000534305 TRIM41Q8WV44 630 aa32.45■■■□□ 2.79
RELA-224ENST00000534305 FANCD2Q9BXW9 1451 aa32.34■■■□□ 2.77
RELA-224ENST00000534305 CFTRP13569 1480 aa32.23■■■□□ 2.75
RELA-224ENST00000534305 PRDM2Q13029 1718 aa32.16■■■□□ 2.74
RELA-224ENST00000534305 TOP2AP11388 1531 aaKnown RBP32.14■■■□□ 2.74
RELA-224ENST00000534305 OSCARQ8IYS5 282 aa32.1■■■□□ 2.73
RELA-224ENST00000534305 URB2Q14146 1524 aaKnown RBP32.05■■■□□ 2.72
RELA-224ENST00000534305 RSF1Q96T23 1441 aaPredicted RBP31.99■■■□□ 2.71
RELA-224ENST00000534305 RIMBP3CA6NJZ7 1639 aa31.85■■■□□ 2.69
RELA-224ENST00000534305 RIMBP3BA6NNM3 1639 aa31.85■■■□□ 2.69
RELA-224ENST00000534305 RIMBP3Q9UFD9 1639 aa31.85■■■□□ 2.69
RELA-224ENST00000534305 IFT140Q96RY7 1462 aa31.84■■■□□ 2.69
RELA-224ENST00000534305 ABCC8Q09428 1581 aa31.7■■■□□ 2.67
RELA-224ENST00000534305 ARHGEF11O15085 1522 aa31.68■■■□□ 2.66
RELA-224ENST00000534305 TOPBP1Q92547 1522 aa31.68■■■□□ 2.66
RELA-224ENST00000534305 ZNF608Q9ULD9 1512 aaPredicted RBP31.68■■■□□ 2.66
RELA-224ENST00000534305 EIF4G3O43432 1585 aaKnown RBP31.66■■■□□ 2.66
RELA-224ENST00000534305 CCDC88BA6NC98 1476 aa31.63■■■□□ 2.65
RELA-224ENST00000534305 DNMBPQ6XZF7 1577 aa31.6■■■□□ 2.65
RELA-224ENST00000534305 CHD1O14646 1710 aa31.54■■■□□ 2.64
RELA-224ENST00000534305 TARBP1Q13395 1621 aaKnown RBP31.46■■■□□ 2.63
RELA-224ENST00000534305 AQRO60306 1485 aaKnown RBP eCLIP31.32■■■□□ 2.61e-9■■■■■ 34.9
RELA-224ENST00000534305 CYB5RLQ6IPT4 315 aa31.31■■■□□ 2.6
RELA-224ENST00000534305 POLA1P09884 1462 aaPredicted RBP31.31■■■□□ 2.6
RELA-224ENST00000534305 WDR97A6NE52 1622 aa31.31■■■□□ 2.6
RELA-224ENST00000534305 ARAP1Q96P48 1450 aa31.3■■■□□ 2.6
RELA-224ENST00000534305 FBLN2P98095 1184 aa31.2■■■□□ 2.59
RELA-224ENST00000534305 TRHP20396 242 aaPredicted RBP31.16■■■□□ 2.58
RELA-224ENST00000534305 SYNJ1O43426 1573 aa31.13■■■□□ 2.57
RELA-224ENST00000534305 SOGA1O94964 1423 aa31.11■■■□□ 2.57
RELA-224ENST00000534305 CLASP1Q7Z460 1538 aa31.1■■■□□ 2.57
RELA-224ENST00000534305 SNAPC4Q5SXM2 1469 aa31.1■■■□□ 2.57
RELA-224ENST00000534305 RAD54L2Q9Y4B4 1467 aa31.1■■■□□ 2.57
RELA-224ENST00000534305 MAGI1Q96QZ7 1491 aaPredicted RBP31.09■■■□□ 2.57
RELA-224ENST00000534305 FGD5Q6ZNL6 1462 aa31.05■■■□□ 2.56
RELA-224ENST00000534305 TDRD9Q8NDG6 1382 aaKnown RBP31.04■■■□□ 2.56
RELA-224ENST00000534305 GRIN2BQ13224 1484 aa30.99■■■□□ 2.55
RELA-224ENST00000534305 PBRM1Q86U86 1689 aa30.95■■■□□ 2.55
RELA-224ENST00000534305 CHMP7Q8WUX9 453 aaPredicted RBP30.95■■■□□ 2.55
RELA-224ENST00000534305 SYNJ2O15056 1496 aa30.95■■■□□ 2.54
RELA-224ENST00000534305 CUX1P39880 1505 aa30.93■■■□□ 2.54
RELA-224ENST00000534305 GAPVD1Q14C86 1478 aa30.78■■■□□ 2.52
RELA-224ENST00000534305 ABCA5Q8WWZ7 1642 aa30.76■■■□□ 2.51
RELA-224ENST00000534305 ABCA10Q8WWZ4 1543 aa30.72■■■□□ 2.51
RELA-224ENST00000534305 AEBP2Q6ZN18 517 aaPredicted RBP30.67■■■□□ 2.5
RELA-224ENST00000534305 GRIN2AQ12879 1464 aa30.58■■■□□ 2.49
RELA-224ENST00000534305 ADAMTS12P58397 1594 aa30.57■■■□□ 2.48
RELA-224ENST00000534305 WRNQ14191 1432 aaPredicted RBP eCLIP30.48■■■□□ 2.47
RELA-224ENST00000534305 CEP170Q5SW79 1584 aa30.48■■■□□ 2.47
RELA-224ENST00000534305 NUP160Q12769 1436 aa30.47■■■□□ 2.47
RELA-224ENST00000534305 SHROOM2Q13796 1616 aa30.47■■■□□ 2.47
RELA-224ENST00000534305 BIVM-ERCC5R4GMW8 1640 aa30.46■■■□□ 2.47
RELA-224ENST00000534305 ERCC6L2Q5T890 1561 aa30.45■■■□□ 2.46
RELA-224ENST00000534305 TOP2BQ02880 1626 aa30.41■■■□□ 2.46
RELA-224ENST00000534305 FHAD1B1AJZ9 1412 aa30.39■■■□□ 2.46
RELA-224ENST00000534305 ERICH3Q5RHP9 1530 aa30.37■■■□□ 2.45
RELA-224ENST00000534305 KIF13AQ9H1H9 1805 aa30.33■■■□□ 2.45
RELA-224ENST00000534305 PRG4Q92954 1404 aaPredicted RBP30.16■■■□□ 2.42
RELA-224ENST00000534305 RUSC2Q8N2Y8 1516 aa30.16■■■□□ 2.42
RELA-224ENST00000534305 SUPT5HO00267 1087 aaKnown RBP30.12■■■□□ 2.41
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms