RNA–Protein interactions for RNA: ENST00000532999.5

RELA-220, Transcript of RELA proto-oncogene, NF-kB subunit, humanhuman

TSL 5

Gene RELA, Length 1,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RELA-220ENST00000532999 NISCHQ9Y2I1 1504 aa34.7■■■■□ 3.15
RELA-220ENST00000532999 CCDC180Q9P1Z9 1646 aa30.79■■■□□ 2.52
RELA-220ENST00000532999 ABCC9O60706 1549 aa29.8■■■□□ 2.36
RELA-220ENST00000532999 ZCCHC6Q5VYS8 1495 aaKnown RBP28.99■■■□□ 2.23
RELA-220ENST00000532999 NACADO15069 1562 aa28.84■■■□□ 2.21
RELA-220ENST00000532999 RB1CC1Q8TDY2 1594 aa28.81■■■□□ 2.2
RELA-220ENST00000532999 DCAF8L2P0C7V8 631 aa28.77■■■□□ 2.2
RELA-220ENST00000532999 MYO15BQ96JP2 1530 aa28.76■■■□□ 2.19
RELA-220ENST00000532999 DCAF1Q9Y4B6 1507 aa28.75■■■□□ 2.19
RELA-220ENST00000532999 UNC13AQ9UPW8 1703 aa28.23■■■□□ 2.11
RELA-220ENST00000532999 SCRIBQ14160 1630 aa28.09■■■□□ 2.09
RELA-220ENST00000532999 BICRAQ9NZM4 1560 aa27.94■■■□□ 2.06
RELA-220ENST00000532999 PABPN1Q86U42 306 aaKnown RBP eCLIP27.85■■■□□ 2.055e-12■□□□□ 10.8
RELA-220ENST00000532999 SHROOM4Q9ULL8 1493 aa27.67■■■□□ 2.02
RELA-220ENST00000532999 EIF4G1Q04637 1599 aaKnown RBP27.18■■□□□ 1.94
RELA-220ENST00000532999 DNAJC5BQ9UF47 199 aa27.07■■□□□ 1.92
RELA-220ENST00000532999 CC2D2AQ9P2K1 1620 aa27■■□□□ 1.91
RELA-220ENST00000532999 CECR2Q9BXF3 1484 aa26.99■■□□□ 1.91
RELA-220ENST00000532999 SMARCA4P51532 1647 aa26.89■■□□□ 1.9
RELA-220ENST00000532999 BAZ1AQ9NRL2 1556 aaPredicted RBP26.89■■□□□ 1.9
RELA-220ENST00000532999 MROH2BQ7Z745 1585 aa26.74■■□□□ 1.87
RELA-220ENST00000532999 ATAD2BQ9ULI0 1458 aa26.65■■□□□ 1.86
RELA-220ENST00000532999 SMARCA2P51531 1590 aa26.65■■□□□ 1.86
RELA-220ENST00000532999 PEG3Q9GZU2 1588 aa26.64■■□□□ 1.86
RELA-220ENST00000532999 NCAPD3P42695 1498 aa26.58■■□□□ 1.85
RELA-220ENST00000532999 HMGXB3Q12766 1538 aa26.52■■□□□ 1.84
RELA-220ENST00000532999 RSF1Q96T23 1441 aaPredicted RBP26.52■■□□□ 1.84
RELA-220ENST00000532999 WIZO95785 1651 aa26.49■■□□□ 1.83
RELA-220ENST00000532999 BAZ1BQ9UIG0 1483 aaKnown RBP26.45■■□□□ 1.82
RELA-220ENST00000532999 TOP2AP11388 1531 aaKnown RBP26.24■■□□□ 1.79
RELA-220ENST00000532999 SUPT5HO00267 1087 aaKnown RBP25.99■■□□□ 1.75
RELA-220ENST00000532999 CCDC88BA6NC98 1476 aa25.89■■□□□ 1.73
RELA-220ENST00000532999 NESP48681 1621 aa25.87■■□□□ 1.73
RELA-220ENST00000532999 LAMC3Q9Y6N6 1575 aa25.87■■□□□ 1.73
RELA-220ENST00000532999 CADPSQ9ULU8 1353 aa25.81■■□□□ 1.72
RELA-220ENST00000532999 CFTRP13569 1480 aa25.74■■□□□ 1.71
RELA-220ENST00000532999 PRDM2Q13029 1718 aa25.66■■□□□ 1.7
RELA-220ENST00000532999 ERCC6Q03468 1493 aa25.66■■□□□ 1.7
RELA-220ENST00000532999 PDS5BQ9NTI5 1447 aa25.65■■□□□ 1.7
RELA-220ENST00000532999 KIF21AQ7Z4S6 1674 aa25.64■■□□□ 1.69
RELA-220ENST00000532999 FANCD2Q9BXW9 1451 aa25.54■■□□□ 1.68
RELA-220ENST00000532999 CEP164Q9UPV0 1460 aa25.49■■□□□ 1.67
RELA-220ENST00000532999 THOC2Q8NI27 1593 aaKnown RBP25.48■■□□□ 1.67
RELA-220ENST00000532999 MRC2Q9UBG0 1479 aa25.39■■□□□ 1.66
RELA-220ENST00000532999 WDR62O43379 1518 aa25.33■■□□□ 1.64
RELA-220ENST00000532999 CUX2O14529 1486 aa25.31■■□□□ 1.64
RELA-220ENST00000532999 URB2Q14146 1524 aaKnown RBP25.28■■□□□ 1.64
RELA-220ENST00000532999 DNMBPQ6XZF7 1577 aa25.18■■□□□ 1.62
RELA-220ENST00000532999 TOPBP1Q92547 1522 aa25.17■■□□□ 1.62
RELA-220ENST00000532999 ABCC8Q09428 1581 aa25.16■■□□□ 1.62
RELA-220ENST00000532999 CUX1P39880 1505 aa25.08■■□□□ 1.6
RELA-220ENST00000532999 WRNQ14191 1432 aaPredicted RBP eCLIP25■■□□□ 1.59
RELA-220ENST00000532999 POLA1P09884 1462 aaPredicted RBP24.97■■□□□ 1.59
RELA-220ENST00000532999 BIVM-ERCC5R4GMW8 1640 aa24.97■■□□□ 1.59
RELA-220ENST00000532999 SYNJ1O43426 1573 aa24.96■■□□□ 1.59
RELA-220ENST00000532999 FGD5Q6ZNL6 1462 aa24.95■■□□□ 1.59
RELA-220ENST00000532999 TOP2BQ02880 1626 aa24.95■■□□□ 1.59
RELA-220ENST00000532999 IFT140Q96RY7 1462 aa24.94■■□□□ 1.58
RELA-220ENST00000532999 TARBP1Q13395 1621 aaKnown RBP24.89■■□□□ 1.58
RELA-220ENST00000532999 RAD54L2Q9Y4B4 1467 aa24.85■■□□□ 1.57
RELA-220ENST00000532999 SOGA1O94964 1423 aa24.84■■□□□ 1.57
RELA-220ENST00000532999 ZNF608Q9ULD9 1512 aaPredicted RBP24.8■■□□□ 1.56
RELA-220ENST00000532999 WDR97A6NE52 1622 aa24.79■■□□□ 1.56
RELA-220ENST00000532999 EIF4G3O43432 1585 aaKnown RBP24.76■■□□□ 1.55
RELA-220ENST00000532999 ABCA10Q8WWZ4 1543 aa24.73■■□□□ 1.55
RELA-220ENST00000532999 AQRO60306 1485 aaKnown RBP eCLIP24.67■■□□□ 1.545e-7■■■■■ 31.2
RELA-220ENST00000532999 TDRD9Q8NDG6 1382 aaKnown RBP24.66■■□□□ 1.54
RELA-220ENST00000532999 ABCA5Q8WWZ7 1642 aa24.64■■□□□ 1.53
RELA-220ENST00000532999 PBRM1Q86U86 1689 aa24.58■■□□□ 1.53
RELA-220ENST00000532999 GAPVD1Q14C86 1478 aa24.57■■□□□ 1.52
RELA-220ENST00000532999 GRIN2BQ13224 1484 aa24.54■■□□□ 1.52
RELA-220ENST00000532999 TRIM41Q8WV44 630 aa24.54■■□□□ 1.52
RELA-220ENST00000532999 SNAPC4Q5SXM2 1469 aa24.48■■□□□ 1.51
RELA-220ENST00000532999 MAGI1Q96QZ7 1491 aaPredicted RBP24.46■■□□□ 1.51
RELA-220ENST00000532999 KIF27Q86VH2 1401 aa24.45■■□□□ 1.5
RELA-220ENST00000532999 ERICH3Q5RHP9 1530 aa24.44■■□□□ 1.5
RELA-220ENST00000532999 CHIC1Q5VXU3 224 aa24.43■■□□□ 1.5
RELA-220ENST00000532999 CHD1O14646 1710 aa24.41■■□□□ 1.5
RELA-220ENST00000532999 ADAMTS12P58397 1594 aa24.38■■□□□ 1.49
RELA-220ENST00000532999 SYNJ2O15056 1496 aa24.35■■□□□ 1.49
RELA-220ENST00000532999 RUSC2Q8N2Y8 1516 aa24.31■■□□□ 1.48
RELA-220ENST00000532999 IGF1RP08069 1367 aa24.3■■□□□ 1.48
RELA-220ENST00000532999 FHAD1B1AJZ9 1412 aa24.3■■□□□ 1.48
RELA-220ENST00000532999 CUL7Q14999 1698 aa24.3■■□□□ 1.48
RELA-220ENST00000532999 FBLN2P98095 1184 aa24.28■■□□□ 1.48
RELA-220ENST00000532999 CHMP7Q8WUX9 453 aaPredicted RBP24.27■■□□□ 1.48
RELA-220ENST00000532999 OSCARQ8IYS5 282 aa24.24■■□□□ 1.47
RELA-220ENST00000532999 GRIN2AQ12879 1464 aa24.24■■□□□ 1.47
RELA-220ENST00000532999 EEA1Q15075 1411 aa24.17■■□□□ 1.46
RELA-220ENST00000532999 CARMIL1Q5VZK9 1371 aa24.16■■□□□ 1.46
RELA-220ENST00000532999 DNAJC5Q9H3Z4 198 aa24.16■■□□□ 1.46
RELA-220ENST00000532999 CLASP1Q7Z460 1538 aa24.13■■□□□ 1.45
RELA-220ENST00000532999 CEP170Q5SW79 1584 aa24.12■■□□□ 1.45
RELA-220ENST00000532999 NUP160Q12769 1436 aa24.12■■□□□ 1.45
RELA-220ENST00000532999 RAPGEF2Q9Y4G8 1499 aa24.07■■□□□ 1.44
RELA-220ENST00000532999 PRXQ9BXM0 1461 aa24.06■■□□□ 1.44
RELA-220ENST00000532999 CSRNP3Q8WYN3 585 aa24.05■■□□□ 1.44
RELA-220ENST00000532999 FAM9AQ8IZU1 332 aaPredicted RBP24.02■■□□□ 1.44
RELA-220ENST00000532999 KIF21BO75037 1637 aa23.94■■□□□ 1.42
RELA-220ENST00000532999 SHROOM2Q13796 1616 aa23.94■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms