Protein–RNA interactions for Protein: Q9GZV3

SLC5A7, High affinity choline transporter 1, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC5A7Q9GZV3 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
SLC5A7Q9GZV3 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC21.22■□□□□ 0.99
SLC5A7Q9GZV3 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
SLC5A7Q9GZV3 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SLC5A7Q9GZV3 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SLC5A7Q9GZV3 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC21.21■□□□□ 0.99
SLC5A7Q9GZV3 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC21.21■□□□□ 0.99
SLC5A7Q9GZV3 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
SLC5A7Q9GZV3 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC21.2■□□□□ 0.99
SLC5A7Q9GZV3 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.99
SLC5A7Q9GZV3 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
SLC5A7Q9GZV3 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
SLC5A7Q9GZV3 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SLC5A7Q9GZV3 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC21.2■□□□□ 0.98
SLC5A7Q9GZV3 DENR-202ENST00000455982 1052 ntTSL 5 BASIC21.2■□□□□ 0.98
SLC5A7Q9GZV3 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
SLC5A7Q9GZV3 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SLC5A7Q9GZV3 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC21.19■□□□□ 0.98
SLC5A7Q9GZV3 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC21.19■□□□□ 0.98
SLC5A7Q9GZV3 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
SLC5A7Q9GZV3 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
SLC5A7Q9GZV3 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SLC5A7Q9GZV3 SHF-208ENST00000560734 1731 ntTSL 3 BASIC21.18■□□□□ 0.98
SLC5A7Q9GZV3 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
SLC5A7Q9GZV3 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SLC5A7Q9GZV3 EBPL-202ENST00000378268 680 ntTSL 3 BASIC21.17■□□□□ 0.98
SLC5A7Q9GZV3 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SLC5A7Q9GZV3 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
SLC5A7Q9GZV3 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
SLC5A7Q9GZV3 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC21.17■□□□□ 0.98
SLC5A7Q9GZV3 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SLC5A7Q9GZV3 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SLC5A7Q9GZV3 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SLC5A7Q9GZV3 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
SLC5A7Q9GZV3 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC21.16■□□□□ 0.98
SLC5A7Q9GZV3 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
SLC5A7Q9GZV3 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SLC5A7Q9GZV3 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SLC5A7Q9GZV3 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SLC5A7Q9GZV3 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC21.15■□□□□ 0.98
SLC5A7Q9GZV3 LINC01003-201ENST00000564834 1764 ntBASIC21.15■□□□□ 0.98
SLC5A7Q9GZV3 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SLC5A7Q9GZV3 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
SLC5A7Q9GZV3 AL449106.1-201ENST00000608517 1980 ntBASIC21.14■□□□□ 0.98
SLC5A7Q9GZV3 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC21.14■□□□□ 0.97
SLC5A7Q9GZV3 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC21.14■□□□□ 0.97
SLC5A7Q9GZV3 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
SLC5A7Q9GZV3 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SLC5A7Q9GZV3 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
SLC5A7Q9GZV3 AL391121.1-201ENST00000607967 1349 ntBASIC21.13■□□□□ 0.97
SLC5A7Q9GZV3 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
SLC5A7Q9GZV3 PKM-204ENST00000449901 2526 ntTSL 2 BASIC21.13■□□□□ 0.97
SLC5A7Q9GZV3 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
SLC5A7Q9GZV3 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
SLC5A7Q9GZV3 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SLC5A7Q9GZV3 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SLC5A7Q9GZV3 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SLC5A7Q9GZV3 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
SLC5A7Q9GZV3 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
SLC5A7Q9GZV3 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC21.1■□□□□ 0.97
SLC5A7Q9GZV3 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC21.1■□□□□ 0.97
SLC5A7Q9GZV3 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
SLC5A7Q9GZV3 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SLC5A7Q9GZV3 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC21.1■□□□□ 0.97
SLC5A7Q9GZV3 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SLC5A7Q9GZV3 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
SLC5A7Q9GZV3 AC100797.4-201ENST00000631653 1827 ntBASIC21.09■□□□□ 0.97
SLC5A7Q9GZV3 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SLC5A7Q9GZV3 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
SLC5A7Q9GZV3 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SLC5A7Q9GZV3 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC21.08■□□□□ 0.97
SLC5A7Q9GZV3 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC21.08■□□□□ 0.97
SLC5A7Q9GZV3 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
SLC5A7Q9GZV3 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC21.08■□□□□ 0.97
SLC5A7Q9GZV3 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
SLC5A7Q9GZV3 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC21.08■□□□□ 0.97
SLC5A7Q9GZV3 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SLC5A7Q9GZV3 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC21.07■□□□□ 0.96
SLC5A7Q9GZV3 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SLC5A7Q9GZV3 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
SLC5A7Q9GZV3 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SLC5A7Q9GZV3 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SLC5A7Q9GZV3 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SLC5A7Q9GZV3 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SLC5A7Q9GZV3 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SLC5A7Q9GZV3 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
SLC5A7Q9GZV3 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SLC5A7Q9GZV3 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
SLC5A7Q9GZV3 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
SLC5A7Q9GZV3 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
SLC5A7Q9GZV3 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
SLC5A7Q9GZV3 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SLC5A7Q9GZV3 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SLC5A7Q9GZV3 CAHM-201ENST00000604200 896 ntBASIC21.04■□□□□ 0.96
SLC5A7Q9GZV3 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
SLC5A7Q9GZV3 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
SLC5A7Q9GZV3 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SLC5A7Q9GZV3 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC21.03■□□□□ 0.96
SLC5A7Q9GZV3 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SLC5A7Q9GZV3 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 10 ms