RNA–Protein interactions for RNA: ENST00000383703.3

LRIG1-202, Transcript of leucine rich repeats and immunoglobulin like domains 1, humanhuman

TSL 1 (best) BASIC

Gene LRIG1, Length 5,283 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIG1-202ENST00000383703 DCAF8L2P0C7V8 631 aa39.41■■■■□ 3.9
LRIG1-202ENST00000383703 NISCHQ9Y2I1 1504 aa39.1■■■■□ 3.85
LRIG1-202ENST00000383703 SUPT5HO00267 1087 aaKnown RBP37.77■■■■□ 3.64
LRIG1-202ENST00000383703 SHROOM4Q9ULL8 1493 aa37.32■■■■□ 3.57
LRIG1-202ENST00000383703 EHMT2Q96KQ7 1210 aa36.2■■■■□ 3.39
LRIG1-202ENST00000383703 FAM9AQ8IZU1 332 aaPredicted RBP35.52■■■■□ 3.28
LRIG1-202ENST00000383703 APLP2Q06481 763 aa35.39■■■■□ 3.26
LRIG1-202ENST00000383703 PCGF6Q9BYE7 350 aa35.23■■■■□ 3.23
LRIG1-202ENST00000383703 TRIM41Q8WV44 630 aa35.02■■■■□ 3.2
LRIG1-202ENST00000383703 TTBK1Q5TCY1 1321 aaPredicted RBP34.99■■■■□ 3.19
LRIG1-202ENST00000383703 PELP1Q8IZL8 1130 aaKnown RBP34.75■■■■□ 3.15
LRIG1-202ENST00000383703 RANGAP1P46060 587 aaPredicted RBP34.62■■■■□ 3.13
LRIG1-202ENST00000383703 ZEB1P37275 1124 aaPredicted RBP34.53■■■■□ 3.12
LRIG1-202ENST00000383703 CCER1Q8TC90 406 aaPredicted RBP34.42■■■■□ 3.1
LRIG1-202ENST00000383703 UBTFP17480 764 aaKnown RBP34.42■■■■□ 3.1
LRIG1-202ENST00000383703 ATP1B4Q9UN42 357 aaPredicted RBP34.18■■■■□ 3.06
LRIG1-202ENST00000383703 CENPBP07199 599 aaPredicted RBP34.1■■■■□ 3.05
LRIG1-202ENST00000383703 PPARGC1BQ86YN6 1023 aaKnown RBP33.96■■■■□ 3.03
LRIG1-202ENST00000383703 CHIC1Q5VXU3 224 aa33.96■■■■□ 3.03
LRIG1-202ENST00000383703 TRIM26Q12899 539 aaPredicted RBP33.9■■■■□ 3.02
LRIG1-202ENST00000383703 LOC105371045A0A1W2PR82 267 aa33.79■■■■□ 3
LRIG1-202ENST00000383703 HRCP23327 699 aa33.6■■■□□ 2.97
LRIG1-202ENST00000383703 YTHDC1Q96MU7 727 aaKnown RBP33.48■■■□□ 2.95
LRIG1-202ENST00000383703 ABCC9O60706 1549 aa33.25■■■□□ 2.91
LRIG1-202ENST00000383703 ERICH6Q7L0X2 663 aa33.24■■■□□ 2.91
LRIG1-202ENST00000383703 ITGAEP38570 1179 aa33.24■■■□□ 2.91
LRIG1-202ENST00000383703 NEFLP07196 543 aa33.22■■■□□ 2.91
LRIG1-202ENST00000383703 HNRNPUL2Q1KMD3 747 aaKnown RBP33.17■■■□□ 2.9
LRIG1-202ENST00000383703 PABPN1Q86U42 306 aaKnown RBP eCLIP33■■■□□ 2.87
LRIG1-202ENST00000383703 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP32.98■■■□□ 2.87
LRIG1-202ENST00000383703 POLR3GLQ9BT43 218 aa32.64■■■□□ 2.82
LRIG1-202ENST00000383703 MYT1LQ9UL68 1186 aa32.61■■■□□ 2.81
LRIG1-202ENST00000383703 DIEXFQ68CQ4 756 aaKnown RBP32.54■■■□□ 2.8
LRIG1-202ENST00000383703 FAM50AQ14320 339 aaKnown RBP32.49■■■□□ 2.79
LRIG1-202ENST00000383703 ZCCHC6Q5VYS8 1495 aaKnown RBP32.45■■■□□ 2.79
LRIG1-202ENST00000383703 CNGB1Q14028 1251 aaPredicted RBP32.35■■■□□ 2.77
LRIG1-202ENST00000383703 MYT1Q01538 1121 aa32.31■■■□□ 2.76
LRIG1-202ENST00000383703 CSRNP3Q8WYN3 585 aa32.22■■■□□ 2.75
LRIG1-202ENST00000383703 SCRIBQ14160 1630 aa32.21■■■□□ 2.75
LRIG1-202ENST00000383703 TRIM52Q96A61 297 aa32.18■■■□□ 2.74
LRIG1-202ENST00000383703 NEUROD1Q13562 356 aa32.17■■■□□ 2.74
LRIG1-202ENST00000383703 CCDC180Q9P1Z9 1646 aa32.03■■■□□ 2.72
LRIG1-202ENST00000383703 DAXXQ9UER7 740 aaPredicted RBP31.98■■■□□ 2.71
LRIG1-202ENST00000383703 ZNF316A6NFI3 1004 aaPredicted RBP31.91■■■□□ 2.7
LRIG1-202ENST00000383703 P3H3Q8IVL6 736 aa31.89■■■□□ 2.7
LRIG1-202ENST00000383703 SLC4A1APQ9BWU0 796 aaKnown RBP31.87■■■□□ 2.69
LRIG1-202ENST00000383703 FBLN2P98095 1184 aa31.84■■■□□ 2.69
LRIG1-202ENST00000383703 DCAF1Q9Y4B6 1507 aa31.8■■■□□ 2.68
LRIG1-202ENST00000383703 ANP32CO43423 234 aa31.77■■■□□ 2.68
LRIG1-202ENST00000383703 GTF3C3Q9Y5Q9 886 aa31.77■■■□□ 2.68
LRIG1-202ENST00000383703 ZNF326Q5BKZ1 582 aaKnown RBP31.74■■■□□ 2.67
LRIG1-202ENST00000383703 ARID3CA6NKF2 412 aa31.65■■■□□ 2.66
LRIG1-202ENST00000383703 BCANQ96GW7 911 aa31.59■■■□□ 2.65
LRIG1-202ENST00000383703 CLSPNQ9HAW4 1339 aa31.48■■■□□ 2.63
LRIG1-202ENST00000383703 ACIN1Q9UKV3 1341 aaKnown RBP31.45■■■□□ 2.63
LRIG1-202ENST00000383703 ZNF777Q9ULD5 760 aaPredicted RBP31.4■■■□□ 2.62
LRIG1-202ENST00000383703 CDK11AQ9UQ88 783 aaPredicted RBP31.39■■■□□ 2.62
LRIG1-202ENST00000383703 RSF1Q96T23 1441 aaPredicted RBP31.38■■■□□ 2.61
LRIG1-202ENST00000383703 RTL5Q5HYW3 569 aaPredicted RBP31.33■■■□□ 2.61
LRIG1-202ENST00000383703 MYO15BQ96JP2 1530 aa31.32■■■□□ 2.6
LRIG1-202ENST00000383703 RB1CC1Q8TDY2 1594 aa31.28■■■□□ 2.6
LRIG1-202ENST00000383703 TONSLQ96HA7 1378 aa31.23■■■□□ 2.59
LRIG1-202ENST00000383703 CLIP1P30622 1438 aa31.15■■■□□ 2.58
LRIG1-202ENST00000383703 NACADO15069 1562 aa31.08■■■□□ 2.57
LRIG1-202ENST00000383703 EEA1Q15075 1411 aa31.05■■■□□ 2.56
LRIG1-202ENST00000383703 DDX10Q13206 875 aaKnown RBP31.02■■■□□ 2.56
LRIG1-202ENST00000383703 CHIC2Q9UKJ5 165 aa31.01■■■□□ 2.55
LRIG1-202ENST00000383703 GOLGA3Q08378 1498 aa30.99■■■□□ 2.55
LRIG1-202ENST00000383703 CEP162Q5TB80 1403 aa30.99■■■□□ 2.55
LRIG1-202ENST00000383703 CANXP27824 592 aaKnown RBP30.95■■■□□ 2.54
LRIG1-202ENST00000383703 MTUS2Q5JR59 1369 aa30.94■■■□□ 2.54
LRIG1-202ENST00000383703 WRNQ14191 1432 aaPredicted RBP eCLIP30.93■■■□□ 2.54
LRIG1-202ENST00000383703 FKBP8Q14318 412 aa30.86■■■□□ 2.53
LRIG1-202ENST00000383703 HNRNPUQ00839 825 aaKnown RBP eCLIP30.85■■■□□ 2.53
LRIG1-202ENST00000383703 ZBTB47Q9UFB7 747 aaPredicted RBP30.84■■■□□ 2.53
LRIG1-202ENST00000383703 BAZ1BQ9UIG0 1483 aaKnown RBP30.83■■■□□ 2.53
LRIG1-202ENST00000383703 NEFMP07197 916 aa30.82■■■□□ 2.52
LRIG1-202ENST00000383703 TNIKQ9UKE5 1360 aa30.77■■■□□ 2.52
LRIG1-202ENST00000383703 FAM9BQ8IZU0 186 aa30.77■■■□□ 2.52
LRIG1-202ENST00000383703 CHGAP10645 457 aaKnown RBP30.73■■■□□ 2.51
LRIG1-202ENST00000383703 MIER1Q8N108 512 aa30.72■■■□□ 2.51
LRIG1-202ENST00000383703 BAZ1AQ9NRL2 1556 aaPredicted RBP30.71■■■□□ 2.51
LRIG1-202ENST00000383703 TSPY4P0CV99 314 aa30.71■■■□□ 2.51
LRIG1-202ENST00000383703 TSPY10P0CW01 314 aa30.71■■■□□ 2.51
LRIG1-202ENST00000383703 CHMP7Q8WUX9 453 aaPredicted RBP30.71■■■□□ 2.51
LRIG1-202ENST00000383703 CECR2Q9BXF3 1484 aa30.69■■■□□ 2.5
LRIG1-202ENST00000383703 GRWD1Q9BQ67 446 aaKnown RBP eCLIP30.69■■■□□ 2.5
LRIG1-202ENST00000383703 CEP164Q9UPV0 1460 aa30.69■■■□□ 2.5
LRIG1-202ENST00000383703 ANP32AP39687 249 aaKnown RBP30.67■■■□□ 2.5
LRIG1-202ENST00000383703 KIF27Q86VH2 1401 aa30.66■■■□□ 2.5
LRIG1-202ENST00000383703 NPM1P06748 294 aaKnown RBP eCLIP30.64■■■□□ 2.5
LRIG1-202ENST00000383703 SLC24A1O60721 1099 aa30.64■■■□□ 2.5
LRIG1-202ENST00000383703 BCL11AQ9H165 835 aa30.63■■■□□ 2.49
LRIG1-202ENST00000383703 RRP7BPQ9NSQ0 103 aa30.61■■■□□ 2.49
LRIG1-202ENST00000383703 HIRIP3Q9BW71 556 aaPredicted RBP30.6■■■□□ 2.49
LRIG1-202ENST00000383703 TMC1Q8TDI8 760 aa30.57■■■□□ 2.48
LRIG1-202ENST00000383703 KDM2AQ9Y2K7 1162 aa30.57■■■□□ 2.48
LRIG1-202ENST00000383703 ESF1Q9H501 851 aaKnown RBP30.56■■■□□ 2.48
LRIG1-202ENST00000383703 NPM2Q86SE8 214 aaKnown RBP30.53■■■□□ 2.48
LRIG1-202ENST00000383703 MRS2Q9HD23 443 aa30.53■■■□□ 2.48
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms