Protein–RNA interactions for Protein: Q8NCL8

TMEM116, Transmembrane protein 116, humanhuman

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116Q8NCL8 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TMEM116Q8NCL8 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
TMEM116Q8NCL8 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC19.95■□□□□ 0.78
TMEM116Q8NCL8 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC19.95■□□□□ 0.78
TMEM116Q8NCL8 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
TMEM116Q8NCL8 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TMEM116Q8NCL8 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC19.94■□□□□ 0.78
TMEM116Q8NCL8 AP002414.2-202ENST00000590929 1450 ntBASIC19.93■□□□□ 0.78
TMEM116Q8NCL8 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TMEM116Q8NCL8 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC19.93■□□□□ 0.78
TMEM116Q8NCL8 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC19.93■□□□□ 0.78
TMEM116Q8NCL8 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC19.93■□□□□ 0.78
TMEM116Q8NCL8 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
TMEM116Q8NCL8 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
TMEM116Q8NCL8 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
TMEM116Q8NCL8 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC19.92■□□□□ 0.78
TMEM116Q8NCL8 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TMEM116Q8NCL8 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC19.92■□□□□ 0.78
TMEM116Q8NCL8 DUX4L28-201ENST00000623687 678 ntBASIC19.92■□□□□ 0.78
TMEM116Q8NCL8 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC19.92■□□□□ 0.78
TMEM116Q8NCL8 MEST-211ENST00000437945 1455 ntTSL 5 BASIC19.92■□□□□ 0.78
TMEM116Q8NCL8 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
TMEM116Q8NCL8 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC19.91■□□□□ 0.78
TMEM116Q8NCL8 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TMEM116Q8NCL8 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
TMEM116Q8NCL8 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TMEM116Q8NCL8 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
TMEM116Q8NCL8 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TMEM116Q8NCL8 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC19.91■□□□□ 0.78
TMEM116Q8NCL8 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
TMEM116Q8NCL8 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TMEM116Q8NCL8 AC108673.1-201ENST00000510422 1159 ntBASIC19.9■□□□□ 0.78
TMEM116Q8NCL8 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC19.9■□□□□ 0.78
TMEM116Q8NCL8 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
TMEM116Q8NCL8 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TMEM116Q8NCL8 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
TMEM116Q8NCL8 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TMEM116Q8NCL8 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
TMEM116Q8NCL8 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC19.89■□□□□ 0.77
TMEM116Q8NCL8 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
TMEM116Q8NCL8 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TMEM116Q8NCL8 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC19.88■□□□□ 0.77
TMEM116Q8NCL8 AC135983.2-203ENST00000454486 1613 ntBASIC19.88■□□□□ 0.77
TMEM116Q8NCL8 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
TMEM116Q8NCL8 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TMEM116Q8NCL8 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TMEM116Q8NCL8 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
TMEM116Q8NCL8 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
TMEM116Q8NCL8 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
TMEM116Q8NCL8 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TMEM116Q8NCL8 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TMEM116Q8NCL8 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC19.87■□□□□ 0.77
TMEM116Q8NCL8 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC19.87■□□□□ 0.77
TMEM116Q8NCL8 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TMEM116Q8NCL8 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TMEM116Q8NCL8 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC19.86■□□□□ 0.77
TMEM116Q8NCL8 CREM-210ENST00000374721 2020 ntTSL 5 BASIC19.86■□□□□ 0.77
TMEM116Q8NCL8 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
TMEM116Q8NCL8 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
TMEM116Q8NCL8 EI24-212ENST00000615917 1407 ntTSL 2 BASIC19.85■□□□□ 0.77
TMEM116Q8NCL8 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
TMEM116Q8NCL8 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TMEM116Q8NCL8 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC19.85■□□□□ 0.77
TMEM116Q8NCL8 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
TMEM116Q8NCL8 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
TMEM116Q8NCL8 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
TMEM116Q8NCL8 AL162393.1-201ENST00000437852 946 ntBASIC19.83■□□□□ 0.77
TMEM116Q8NCL8 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
TMEM116Q8NCL8 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
TMEM116Q8NCL8 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
TMEM116Q8NCL8 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC19.82■□□□□ 0.76
TMEM116Q8NCL8 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
TMEM116Q8NCL8 NRG1-221ENST00000614767 762 ntTSL 5 BASIC19.82■□□□□ 0.76
TMEM116Q8NCL8 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
TMEM116Q8NCL8 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TMEM116Q8NCL8 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TMEM116Q8NCL8 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
TMEM116Q8NCL8 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
TMEM116Q8NCL8 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
TMEM116Q8NCL8 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TMEM116Q8NCL8 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
TMEM116Q8NCL8 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
TMEM116Q8NCL8 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TMEM116Q8NCL8 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
TMEM116Q8NCL8 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
TMEM116Q8NCL8 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TMEM116Q8NCL8 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
TMEM116Q8NCL8 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
TMEM116Q8NCL8 LINC00273-201ENST00000539813 1452 ntBASIC19.79■□□□□ 0.76
TMEM116Q8NCL8 AC087741.3-201ENST00000624270 1347 ntBASIC19.79■□□□□ 0.76
TMEM116Q8NCL8 AC018358.1-201ENST00000631079 1402 ntBASIC19.79■□□□□ 0.76
TMEM116Q8NCL8 MIR6090-201ENST00000622481 60 ntBASIC19.79■□□□□ 0.76
TMEM116Q8NCL8 WHAMMP2-203ENST00000563942 1603 ntBASIC19.79■□□□□ 0.76
TMEM116Q8NCL8 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC19.79■□□□□ 0.76
TMEM116Q8NCL8 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC19.78■□□□□ 0.76
TMEM116Q8NCL8 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC19.78■□□□□ 0.76
TMEM116Q8NCL8 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC19.78■□□□□ 0.76
TMEM116Q8NCL8 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC19.77■□□□□ 0.76
TMEM116Q8NCL8 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC19.77■□□□□ 0.76
TMEM116Q8NCL8 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms