Protein–RNA interactions for Protein: Q07955

SRSF1, Serine/arginine-rich splicing factor 1, humanhuman

Known RBP eCLIP

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1Q07955 MAT2A-201ENST00000306434 2819 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.182e-14■■□□□ 12.4
SRSF1Q07955 MCM4-210ENST00000520934 621 ntTSL 321.29■■□□□ 14e-10■■□□□ 12.3
SRSF1Q07955 MCM4-211ENST00000520994 522 ntTSL 319.13■□□□□ 0.654e-10■■□□□ 12.3
SRSF1Q07955 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC14.38□□□□□ -0.111e-7■■□□□ 12.3
SRSF1Q07955 RNF31-209ENST00000559071 1943 ntTSL 213.56□□□□□ -0.241e-9■■□□□ 12.3
SRSF1Q07955 MCM4-216ENST00000524086 547 ntTSL 512.28□□□□□ -0.444e-10■■□□□ 12.3
SRSF1Q07955 MCM4-207ENST00000519170 734 ntTSL 311.28□□□□□ -0.64e-10■■□□□ 12.3
SRSF1Q07955 MCM4-203ENST00000518221 572 ntTSL 410.27□□□□□ -0.774e-10■■□□□ 12.3
SRSF1Q07955 RNF31-224ENST00000560787 2834 ntTSL 210.08□□□□□ -0.81e-9■■□□□ 12.3
SRSF1Q07955 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.261e-7■■□□□ 12.3
SRSF1Q07955 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC12.61□□□□□ -0.391e-7■■□□□ 12.3
SRSF1Q07955 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.411e-7■■□□□ 12.3
SRSF1Q07955 UBR5-203ENST00000518145 598 ntTSL 46.03□□□□□ -1.441e-7■■□□□ 12.3
SRSF1Q07955 ASPSCR1-213ENST00000582355 1246 ntTSL 522.02■■□□□ 1.121e-16■■□□□ 12.3
SRSF1Q07955 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC18.59■□□□□ 0.571e-16■■□□□ 12.3
SRSF1Q07955 ASPSCR1-219ENST00000584454 1919 ntTSL 1 (best)18.42■□□□□ 0.541e-16■■□□□ 12.3
SRSF1Q07955 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.431e-16■■□□□ 12.3
SRSF1Q07955 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.361e-16■■□□□ 12.3
SRSF1Q07955 ASPSCR1-210ENST00000581608 2387 ntTSL 215.47■□□□□ 0.071e-16■■□□□ 12.3
SRSF1Q07955 ASPSCR1-204ENST00000577733 5503 ntTSL 213.91□□□□□ -0.181e-16■■□□□ 12.3
SRSF1Q07955 ASPSCR1-205ENST00000578236 3277 ntTSL 210.3□□□□□ -0.761e-16■■□□□ 12.3
SRSF1Q07955 ANO9-207ENST00000532094 5487 ntTSL 214.08□□□□□ -0.168e-10■■□□□ 12.3
SRSF1Q07955 ANO9-208ENST00000534161 2158 ntTSL 213.54□□□□□ -0.248e-10■■□□□ 12.3
SRSF1Q07955 ANO9-206ENST00000528927 2639 ntTSL 1 (best)13.12□□□□□ -0.318e-10■■□□□ 12.3
SRSF1Q07955 ANO9-205ENST00000526142 2868 ntTSL 212.44□□□□□ -0.428e-10■■□□□ 12.3
SRSF1Q07955 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.648e-10■■□□□ 12.3
SRSF1Q07955 CPNE7-209ENST00000568977 682 ntTSL 517.8■□□□□ 0.443e-7■■□□□ 12.3
SRSF1Q07955 CPNE7-205ENST00000529800 519 ntTSL 511.32□□□□□ -0.63e-7■■□□□ 12.3
SRSF1Q07955 UBE3C-205ENST00000470408 5197 ntTSL 27.68□□□□□ -1.183e-11■■□□□ 12.3
SRSF1Q07955 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC18.68■□□□□ 0.581e-9■■□□□ 12.3
SRSF1Q07955 AL390728.4-204ENST00000606454 660 ntTSL 313.97□□□□□ -0.171e-9■■□□□ 12.3
SRSF1Q07955 AL390728.4-203ENST00000606212 637 ntTSL 312.66□□□□□ -0.381e-9■■□□□ 12.3
SRSF1Q07955 HERC2P2-204ENST00000618651 535 ntTSL 59.07□□□□□ -0.961e-9■■□□□ 12.3
SRSF1Q07955 HERC2P2-201ENST00000613386 5181 ntBASIC8.91□□□□□ -0.981e-9■■□□□ 12.3
SRSF1Q07955 HERC2P2-205ENST00000619021 5746 ntTSL 1 (best) BASIC8.34□□□□□ -1.071e-9■■□□□ 12.3
SRSF1Q07955 HSP90AA1-201ENST00000216281 3379 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.682e-43■■□□□ 12.3
SRSF1Q07955 HSP90AA1-202ENST00000334701 3510 ntTSL 1 (best) BASIC9.83□□□□□ -0.842e-43■■□□□ 12.3
SRSF1Q07955 HSP90AA1-204ENST00000554401 1710 ntTSL 1 (best)7.8□□□□□ -1.162e-43■■□□□ 12.3
SRSF1Q07955 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.315e-8■■□□□ 12.3
SRSF1Q07955 IP6K2-227ENST00000479914 1077 ntTSL 1 (best)15.61■□□□□ 0.099e-9■■□□□ 12.3
SRSF1Q07955 IP6K2-223ENST00000453202 571 ntTSL 4 BASIC12.52□□□□□ -0.419e-9■■□□□ 12.3
SRSF1Q07955 IP6K2-225ENST00000455545 539 ntTSL 311.61□□□□□ -0.559e-9■■□□□ 12.3
SRSF1Q07955 IP6K2-222ENST00000450045 689 ntTSL 3 BASIC10.62□□□□□ -0.719e-9■■□□□ 12.3
SRSF1Q07955 LUC7L3-214ENST00000508482 1597 ntTSL 213.17□□□□□ -0.36e-8■■□□□ 12.3
SRSF1Q07955 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.346e-8■■□□□ 12.3
SRSF1Q07955 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC12.53□□□□□ -0.46e-8■■□□□ 12.3
SRSF1Q07955 LUC7L3-208ENST00000505658 7040 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.136e-8■■□□□ 12.3
SRSF1Q07955 SREBF1-216ENST00000490796 698 ntTSL 219.06■□□□□ 0.646e-7■■□□□ 12.3
SRSF1Q07955 SREBF1-220ENST00000581707 695 ntTSL 218.31■□□□□ 0.526e-7■■□□□ 12.3
SRSF1Q07955 SREBF1-207ENST00000447641 644 ntTSL 313.52□□□□□ -0.256e-7■■□□□ 12.3
SRSF1Q07955 SCARB1-209ENST00000545305 851 ntTSL 211.64□□□□□ -0.552e-6■■□□□ 12.3
SRSF1Q07955 CHD2-207ENST00000626782 2131 ntTSL 2 BASIC8.49□□□□□ -1.051e-8■■□□□ 12.3
SRSF1Q07955 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC5.41□□□□□ -1.541e-8■■□□□ 12.3
SRSF1Q07955 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC4.8□□□□□ -1.641e-8■■□□□ 12.3
SRSF1Q07955 PLEC-202ENST00000345136 14803 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.761e-6■■□□□ 12.3
SRSF1Q07955 PLEC-208ENST00000436759 14787 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.761e-6■■□□□ 12.3
SRSF1Q07955 PLEC-210ENST00000527096 13713 ntAPPRIS ALT2 TSL 5 BASIC9.76□□□□□ -0.851e-6■■□□□ 12.3
SRSF1Q07955 PLEC-201ENST00000322810 15249 ntAPPRIS P4 TSL 1 (best) BASIC9.68□□□□□ -0.861e-6■■□□□ 12.3
SRSF1Q07955 PLEC-204ENST00000354958 14751 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.91e-6■■□□□ 12.3
SRSF1Q07955 PLEC-203ENST00000354589 14736 ntAPPRIS ALT2 TSL 1 (best) BASIC9.25□□□□□ -0.931e-6■■□□□ 12.3
SRSF1Q07955 PLEC-206ENST00000357649 14689 ntAPPRIS ALT2 TSL 1 (best) BASIC9.24□□□□□ -0.931e-6■■□□□ 12.3
SRSF1Q07955 PLEC-205ENST00000356346 14683 ntTSL 1 (best) BASIC9.21□□□□□ -0.931e-6■■□□□ 12.3
SRSF1Q07955 PLEC-207ENST00000398774 14646 ntAPPRIS ALT2 TSL 1 (best) BASIC8.61□□□□□ -1.031e-6■■□□□ 12.3
SRSF1Q07955 ZKSCAN8-203ENST00000536028 1052 ntTSL 26.67□□□□□ -1.344e-8■■□□□ 12.3
SRSF1Q07955 ZKSCAN8-202ENST00000457389 2071 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.364e-8■■□□□ 12.3
SRSF1Q07955 ZKSCAN8-204ENST00000606198 2057 ntTSL 1 (best)6.56□□□□□ -1.364e-8■■□□□ 12.3
SRSF1Q07955 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.764e-8■■□□□ 12.3
SRSF1Q07955 SRSF5-210ENST00000555412 572 ntTSL 212.25□□□□□ -0.451e-10■■□□□ 12.3
SRSF1Q07955 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.452e-12■■□□□ 12.3
SRSF1Q07955 SRSF5-214ENST00000556436 611 ntTSL 211.86□□□□□ -0.511e-10■■□□□ 12.3
SRSF1Q07955 SRSF5-201ENST00000394366 1638 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.552e-12■■□□□ 12.3
SRSF1Q07955 SRSF5-215ENST00000556587 1863 ntTSL 1 (best)11.38□□□□□ -0.592e-12■■□□□ 12.3
SRSF1Q07955 SRSF5-205ENST00000553635 1412 ntTSL 2 BASIC10.37□□□□□ -0.752e-12■■□□□ 12.3
SRSF1Q07955 SRSF5-217ENST00000557154 1500 ntAPPRIS P1 TSL 2 BASIC9.92□□□□□ -0.822e-12■■□□□ 12.3
SRSF1Q07955 SRSF5-202ENST00000553369 613 ntTSL 28.82□□□□□ -11e-10■■□□□ 12.3
SRSF1Q07955 SRSF5-204ENST00000553548 526 ntTSL 4 BASIC8.82□□□□□ -11e-10■■□□□ 12.3
SRSF1Q07955 SRSF5-211ENST00000555547 2057 ntTSL 58.62□□□□□ -1.032e-12■■□□□ 12.3
SRSF1Q07955 SRSF5-218ENST00000557435 622 ntTSL 28.55□□□□□ -1.041e-10■■□□□ 12.3
SRSF1Q07955 SRSF5-212ENST00000556184 2443 ntTSL 1 (best)8.43□□□□□ -1.062e-12■■□□□ 12.3
SRSF1Q07955 SRSF5-206ENST00000554021 567 ntTSL 4 BASIC7.29□□□□□ -1.241e-10■■□□□ 12.3
SRSF1Q07955 SRSF5-207ENST00000554465 3044 ntTSL 1 (best)6.99□□□□□ -1.292e-12■■□□□ 12.3
SRSF1Q07955 SRSF5-209ENST00000555349 565 ntTSL 4 BASIC6.82□□□□□ -1.321e-10■■□□□ 12.3
SRSF1Q07955 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC13.73□□□□□ -0.212e-6■■□□□ 12.3
SRSF1Q07955 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.422e-6■■□□□ 12.3
SRSF1Q07955 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.472e-6■■□□□ 12.3
SRSF1Q07955 KMT2E-203ENST00000334884 6840 ntTSL 512□□□□□ -0.492e-6■■□□□ 12.3
SRSF1Q07955 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC19.86■□□□□ 0.778e-7■■□□□ 12.3
SRSF1Q07955 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC18.95■□□□□ 0.628e-7■■□□□ 12.3
SRSF1Q07955 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC17.84■□□□□ 0.458e-7■■□□□ 12.3
SRSF1Q07955 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.398e-7■■□□□ 12.3
SRSF1Q07955 ACAA1-203ENST00000411549 1944 ntTSL 1 (best)16.78■□□□□ 0.288e-7■■□□□ 12.3
SRSF1Q07955 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC16.6■□□□□ 0.258e-7■■□□□ 12.3
SRSF1Q07955 MVD-210ENST00000565610 507 ntTSL 318.69■□□□□ 0.581e-11■■□□□ 12.3
SRSF1Q07955 SLC26A6-211ENST00000431739 588 ntTSL 314.13□□□□□ -0.154e-8■■□□□ 12.3
SRSF1Q07955 SLC26A6-209ENST00000426599 555 ntTSL 413.48□□□□□ -0.254e-8■■□□□ 12.3
SRSF1Q07955 SLC26A6-213ENST00000455886 2460 ntTSL 2 BASIC10.6□□□□□ -0.714e-8■■□□□ 12.3
SRSF1Q07955 SLC26A6-202ENST00000337000 2317 ntTSL 2 BASIC10.53□□□□□ -0.724e-8■■□□□ 12.3
SRSF1Q07955 SLC26A6-207ENST00000420764 2630 ntAPPRIS ALT1 TSL 1 (best) BASIC10.32□□□□□ -0.764e-8■■□□□ 12.3
SRSF1Q07955 SLC26A6-205ENST00000395550 2589 ntAPPRIS P3 TSL 1 (best) BASIC10.14□□□□□ -0.794e-8■■□□□ 12.3
SRSF1Q07955 SLC26A6-204ENST00000383733 2545 ntTSL 1 (best) BASIC10.07□□□□□ -0.84e-8■■□□□ 12.3
Retrieved 100 of 14,836 protein–RNA pairs in 64.5 ms