RNA–Protein interactions for RNA: ENST00000470408.5

UBE3C-205, Transcript of ubiquitin protein ligase E3C, humanhuman

TSL 2

Gene UBE3C, Length 5,197 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3C-205ENST00000470408 NISCHQ9Y2I1 1504 aa16.91■□□□□ 0.3
UBE3C-205ENST00000470408 DCAF8L2P0C7V8 631 aa16.81■□□□□ 0.28
UBE3C-205ENST00000470408 SUPT5HO00267 1087 aaKnown RBP15.68■□□□□ 0.1
UBE3C-205ENST00000470408 SHROOM4Q9ULL8 1493 aa15.5■□□□□ 0.07
UBE3C-205ENST00000470408 FAM9AQ8IZU1 332 aaPredicted RBP15.24■□□□□ 0.03
UBE3C-205ENST00000470408 APLP2Q06481 763 aa15.07■□□□□ 0
UBE3C-205ENST00000470408 PELP1Q8IZL8 1130 aaKnown RBP14.79□□□□□ -0.04
UBE3C-205ENST00000470408 EHMT2Q96KQ7 1210 aa14.77□□□□□ -0.04
UBE3C-205ENST00000470408 TRIM41Q8WV44 630 aa14.75□□□□□ -0.05
UBE3C-205ENST00000470408 ABCC9O60706 1549 aa14.55□□□□□ -0.08
UBE3C-205ENST00000470408 UBTFP17480 764 aaKnown RBP14.53□□□□□ -0.08
UBE3C-205ENST00000470408 MYT1Q01538 1121 aa14.47□□□□□ -0.09
UBE3C-205ENST00000470408 ATP1B4Q9UN42 357 aaPredicted RBP14.44□□□□□ -0.1
UBE3C-205ENST00000470408 RANGAP1P46060 587 aaPredicted RBP14.39□□□□□ -0.11
UBE3C-205ENST00000470408 ZEB1P37275 1124 aaPredicted RBP14.33□□□□□ -0.12
UBE3C-205ENST00000470408 CENPBP07199 599 aaPredicted RBP14.28□□□□□ -0.12
UBE3C-205ENST00000470408 PABPN1Q86U42 306 aaKnown RBP eCLIP14.26□□□□□ -0.13
UBE3C-205ENST00000470408 TTBK1Q5TCY1 1321 aaPredicted RBP14.25□□□□□ -0.13
UBE3C-205ENST00000470408 PCGF6Q9BYE7 350 aa14.23□□□□□ -0.13
UBE3C-205ENST00000470408 CCER1Q8TC90 406 aaPredicted RBP14.15□□□□□ -0.14
UBE3C-205ENST00000470408 CCDC180Q9P1Z9 1646 aa14.15□□□□□ -0.14
UBE3C-205ENST00000470408 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.12□□□□□ -0.15
UBE3C-205ENST00000470408 HNRNPUL2Q1KMD3 747 aaKnown RBP14.12□□□□□ -0.15
UBE3C-205ENST00000470408 ERICH6Q7L0X2 663 aa14.07□□□□□ -0.16
UBE3C-205ENST00000470408 CHIC1Q5VXU3 224 aa14.05□□□□□ -0.16
UBE3C-205ENST00000470408 MYT1LQ9UL68 1186 aa14.04□□□□□ -0.16
UBE3C-205ENST00000470408 ZCCHC6Q5VYS8 1495 aaKnown RBP13.98□□□□□ -0.17
UBE3C-205ENST00000470408 TRIM26Q12899 539 aaPredicted RBP13.95□□□□□ -0.18
UBE3C-205ENST00000470408 SCRIBQ14160 1630 aa13.9□□□□□ -0.18
UBE3C-205ENST00000470408 RB1CC1Q8TDY2 1594 aa13.89□□□□□ -0.19
UBE3C-205ENST00000470408 HRCP23327 699 aa13.84□□□□□ -0.19
UBE3C-205ENST00000470408 NACADO15069 1562 aa13.79□□□□□ -0.2
UBE3C-205ENST00000470408 ITGAEP38570 1179 aa13.79□□□□□ -0.2
UBE3C-205ENST00000470408 NEFLP07196 543 aa13.79□□□□□ -0.2
UBE3C-205ENST00000470408 FBLN2P98095 1184 aa13.77□□□□□ -0.21
UBE3C-205ENST00000470408 LOC105371045A0A1W2PR82 267 aa13.76□□□□□ -0.21
UBE3C-205ENST00000470408 PPARGC1BQ86YN6 1023 aaKnown RBP13.75□□□□□ -0.21
UBE3C-205ENST00000470408 CSRNP3Q8WYN3 585 aa13.7□□□□□ -0.22
UBE3C-205ENST00000470408 CDK11AQ9UQ88 783 aaPredicted RBP13.69□□□□□ -0.22
UBE3C-205ENST00000470408 YTHDC1Q96MU7 727 aaKnown RBP13.67□□□□□ -0.22
UBE3C-205ENST00000470408 FAM50AQ14320 339 aaKnown RBP13.66□□□□□ -0.22
UBE3C-205ENST00000470408 DCAF1Q9Y4B6 1507 aa13.58□□□□□ -0.24
UBE3C-205ENST00000470408 TRIM52Q96A61 297 aa13.58□□□□□ -0.24
UBE3C-205ENST00000470408 NPM1P06748 294 aaKnown RBP eCLIP13.57□□□□□ -0.24
UBE3C-205ENST00000470408 POLR3GLQ9BT43 218 aa13.54□□□□□ -0.24
UBE3C-205ENST00000470408 BAZ1BQ9UIG0 1483 aaKnown RBP13.44□□□□□ -0.26
UBE3C-205ENST00000470408 SLC4A1APQ9BWU0 796 aaKnown RBP13.43□□□□□ -0.26
UBE3C-205ENST00000470408 P3H3Q8IVL6 736 aa13.42□□□□□ -0.26
UBE3C-205ENST00000470408 ESF1Q9H501 851 aaKnown RBP13.42□□□□□ -0.26
UBE3C-205ENST00000470408 CHMP7Q8WUX9 453 aaPredicted RBP13.42□□□□□ -0.26
UBE3C-205ENST00000470408 EEA1Q15075 1411 aa13.41□□□□□ -0.26
UBE3C-205ENST00000470408 BAZ1AQ9NRL2 1556 aaPredicted RBP13.38□□□□□ -0.27
UBE3C-205ENST00000470408 RSF1Q96T23 1441 aaPredicted RBP13.38□□□□□ -0.27
UBE3C-205ENST00000470408 ZNF777Q9ULD5 760 aaPredicted RBP13.34□□□□□ -0.27
UBE3C-205ENST00000470408 DAXXQ9UER7 740 aaPredicted RBP13.34□□□□□ -0.27
UBE3C-205ENST00000470408 ACIN1Q9UKV3 1341 aaKnown RBP13.33□□□□□ -0.27
UBE3C-205ENST00000470408 MYO15BQ96JP2 1530 aa13.32□□□□□ -0.28
UBE3C-205ENST00000470408 NEUROD1Q13562 356 aa13.31□□□□□ -0.28
UBE3C-205ENST00000470408 DIEXFQ68CQ4 756 aaKnown RBP13.3□□□□□ -0.28
UBE3C-205ENST00000470408 ARID3CA6NKF2 412 aa13.29□□□□□ -0.28
UBE3C-205ENST00000470408 BCANQ96GW7 911 aa13.27□□□□□ -0.28
UBE3C-205ENST00000470408 WRNQ14191 1432 aaPredicted RBP eCLIP13.26□□□□□ -0.29
UBE3C-205ENST00000470408 ERCC6Q03468 1493 aa13.26□□□□□ -0.29
UBE3C-205ENST00000470408 KIF27Q86VH2 1401 aa13.25□□□□□ -0.29
UBE3C-205ENST00000470408 TSPY4P0CV99 314 aa13.25□□□□□ -0.29
UBE3C-205ENST00000470408 TSPY10P0CW01 314 aa13.25□□□□□ -0.29
UBE3C-205ENST00000470408 ZNF326Q5BKZ1 582 aaKnown RBP13.25□□□□□ -0.29
UBE3C-205ENST00000470408 RTL5Q5HYW3 569 aaPredicted RBP13.24□□□□□ -0.29
UBE3C-205ENST00000470408 MTUS2Q5JR59 1369 aa13.22□□□□□ -0.29
UBE3C-205ENST00000470408 NEFMP07197 916 aa13.22□□□□□ -0.29
UBE3C-205ENST00000470408 STAG3Q9UJ98 1225 aa13.21□□□□□ -0.29
UBE3C-205ENST00000470408 ANP32CO43423 234 aa13.2□□□□□ -0.3
UBE3C-205ENST00000470408 SMARCA2P51531 1590 aa13.2□□□□□ -0.3
UBE3C-205ENST00000470408 PLEKHD1A6NEE1 506 aa13.19□□□□□ -0.3
UBE3C-205ENST00000470408 CNGB1Q14028 1251 aaPredicted RBP13.19□□□□□ -0.3
UBE3C-205ENST00000470408 GTF3C3Q9Y5Q9 886 aa13.18□□□□□ -0.3
UBE3C-205ENST00000470408 GOLGA3Q08378 1498 aa13.18□□□□□ -0.3
UBE3C-205ENST00000470408 CLIP1P30622 1438 aa13.17□□□□□ -0.3
UBE3C-205ENST00000470408 PDS5BQ9NTI5 1447 aa13.15□□□□□ -0.3
UBE3C-205ENST00000470408 TONSLQ96HA7 1378 aa13.12□□□□□ -0.31
UBE3C-205ENST00000470408 CEP164Q9UPV0 1460 aa13.11□□□□□ -0.31
UBE3C-205ENST00000470408 CHGAP10645 457 aaKnown RBP13.09□□□□□ -0.31
UBE3C-205ENST00000470408 CECR2Q9BXF3 1484 aa13.08□□□□□ -0.32
UBE3C-205ENST00000470408 ZNF316A6NFI3 1004 aaPredicted RBP13.07□□□□□ -0.32
UBE3C-205ENST00000470408 ZBTB47Q9UFB7 747 aaPredicted RBP13.07□□□□□ -0.32
UBE3C-205ENST00000470408 TNIKQ9UKE5 1360 aa13.05□□□□□ -0.32
UBE3C-205ENST00000470408 CLSPNQ9HAW4 1339 aa13.04□□□□□ -0.32
UBE3C-205ENST00000470408 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.01□□□□□ -0.33
UBE3C-205ENST00000470408 FHAD1B1AJZ9 1412 aa13□□□□□ -0.33
UBE3C-205ENST00000470408 KCNH8Q96L42 1107 aa13□□□□□ -0.33
UBE3C-205ENST00000470408 CHIC2Q9UKJ5 165 aa13□□□□□ -0.33
UBE3C-205ENST00000470408 CARMIL1Q5VZK9 1371 aa12.99□□□□□ -0.33
UBE3C-205ENST00000470408 CFDP1Q9UEE9 299 aaPredicted RBP12.99□□□□□ -0.33
UBE3C-205ENST00000470408 CEP162Q5TB80 1403 aa12.98□□□□□ -0.33
UBE3C-205ENST00000470408 CUX2O14529 1486 aa12.97□□□□□ -0.33
UBE3C-205ENST00000470408 CARMIL2Q6F5E8 1435 aa12.95□□□□□ -0.34
UBE3C-205ENST00000470408 CADPSQ9ULU8 1353 aa12.95□□□□□ -0.34
UBE3C-205ENST00000470408 MROH2BQ7Z745 1585 aa12.95□□□□□ -0.34
UBE3C-205ENST00000470408 CANXP27824 592 aaKnown RBP12.93□□□□□ -0.34
UBE3C-205ENST00000470408 CCDC88BA6NC98 1476 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms