RNA–Protein interactions for RNA: ENST00000625927.2

ACAA1-219, Transcript of acetyl-CoA acyltransferase 1, humanhuman

TSL 5 BASIC

Gene ACAA1, Length 1,760 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACAA1-219ENST00000625927 NISCHQ9Y2I1 1504 aa51.77■■■■■ 5.88
ACAA1-219ENST00000625927 CCDC180Q9P1Z9 1646 aa45.21■■■■■ 4.83
ACAA1-219ENST00000625927 ZCCHC6Q5VYS8 1495 aaKnown RBP43.43■■■■■ 4.54
ACAA1-219ENST00000625927 ABCC9O60706 1549 aa43.14■■■■■ 4.5
ACAA1-219ENST00000625927 DCAF8L2P0C7V8 631 aa43.04■■■■■ 4.48
ACAA1-219ENST00000625927 DCAF1Q9Y4B6 1507 aa42.72■■■■■ 4.43
ACAA1-219ENST00000625927 MYO15BQ96JP2 1530 aa42.3■■■■■ 4.36
ACAA1-219ENST00000625927 SHROOM4Q9ULL8 1493 aa42.23■■■■■ 4.35
ACAA1-219ENST00000625927 NACADO15069 1562 aa42.19■■■■■ 4.34
ACAA1-219ENST00000625927 RB1CC1Q8TDY2 1594 aa41.93■■■■■ 4.3
ACAA1-219ENST00000625927 SCRIBQ14160 1630 aa41.67■■■■■ 4.26
ACAA1-219ENST00000625927 UNC13AQ9UPW8 1703 aa41.07■■■■■ 4.16
ACAA1-219ENST00000625927 PABPN1Q86U42 306 aaKnown RBP eCLIP40.68■■■■■ 4.11e-7■□□□□ 9.6
ACAA1-219ENST00000625927 BICRAQ9NZM4 1560 aa40.66■■■■■ 4.1
ACAA1-219ENST00000625927 SUPT5HO00267 1087 aaKnown RBP40.49■■■■■ 4.07
ACAA1-219ENST00000625927 CECR2Q9BXF3 1484 aa40.31■■■■■ 4.04
ACAA1-219ENST00000625927 RSF1Q96T23 1441 aaPredicted RBP40.09■■■■■ 4.01
ACAA1-219ENST00000625927 MROH2BQ7Z745 1585 aa40.02■■■■■ 4
ACAA1-219ENST00000625927 BAZ1AQ9NRL2 1556 aaPredicted RBP39.99■■■■□ 3.99
ACAA1-219ENST00000625927 SMARCA4P51532 1647 aa39.86■■■■□ 3.97
ACAA1-219ENST00000625927 WIZO95785 1651 aa39.7■■■■□ 3.95
ACAA1-219ENST00000625927 EIF4G1Q04637 1599 aaKnown RBP39.48■■■■□ 3.91
ACAA1-219ENST00000625927 PEG3Q9GZU2 1588 aa39.31■■■■□ 3.88
ACAA1-219ENST00000625927 ATAD2BQ9ULI0 1458 aa39.28■■■■□ 3.88
ACAA1-219ENST00000625927 TOP2AP11388 1531 aaKnown RBP39.24■■■■□ 3.87
ACAA1-219ENST00000625927 SMARCA2P51531 1590 aa39.22■■■■□ 3.87
ACAA1-219ENST00000625927 BAZ1BQ9UIG0 1483 aaKnown RBP39.07■■■■□ 3.84
ACAA1-219ENST00000625927 CC2D2AQ9P2K1 1620 aa38.98■■■■□ 3.83
ACAA1-219ENST00000625927 NCAPD3P42695 1498 aa38.95■■■■□ 3.83
ACAA1-219ENST00000625927 CCDC88BA6NC98 1476 aa38.86■■■■□ 3.81
ACAA1-219ENST00000625927 HMGXB3Q12766 1538 aa38.86■■■■□ 3.81
ACAA1-219ENST00000625927 CHIC1Q5VXU3 224 aa38.54■■■■□ 3.76
ACAA1-219ENST00000625927 DNAJC5BQ9UF47 199 aa38.29■■■■□ 3.72
ACAA1-219ENST00000625927 TRIM41Q8WV44 630 aa38.04■■■■□ 3.68
ACAA1-219ENST00000625927 CFTRP13569 1480 aa38.03■■■■□ 3.68
ACAA1-219ENST00000625927 ABCC8Q09428 1581 aa38■■■■□ 3.67
ACAA1-219ENST00000625927 CADPSQ9ULU8 1353 aa37.98■■■■□ 3.67
ACAA1-219ENST00000625927 NESP48681 1621 aa37.78■■■■□ 3.64
ACAA1-219ENST00000625927 PRDM2Q13029 1718 aa37.78■■■■□ 3.64
ACAA1-219ENST00000625927 WRNQ14191 1432 aaPredicted RBP eCLIP37.76■■■■□ 3.64
ACAA1-219ENST00000625927 LAMC3Q9Y6N6 1575 aa37.67■■■■□ 3.62
ACAA1-219ENST00000625927 SYNJ1O43426 1573 aa37.61■■■■□ 3.61
ACAA1-219ENST00000625927 FANCD2Q9BXW9 1451 aa37.58■■■■□ 3.61
ACAA1-219ENST00000625927 TOP2BQ02880 1626 aa37.44■■■■□ 3.58
ACAA1-219ENST00000625927 CUX1P39880 1505 aa37.43■■■■□ 3.58
ACAA1-219ENST00000625927 FAM9AQ8IZU1 332 aaPredicted RBP37.43■■■■□ 3.58
ACAA1-219ENST00000625927 PDS5BQ9NTI5 1447 aa37.42■■■■□ 3.58
ACAA1-219ENST00000625927 BIVM-ERCC5R4GMW8 1640 aa37.39■■■■□ 3.58
ACAA1-219ENST00000625927 CEP164Q9UPV0 1460 aa37.36■■■■□ 3.57
ACAA1-219ENST00000625927 KIF21AQ7Z4S6 1674 aa37.28■■■■□ 3.56
ACAA1-219ENST00000625927 SOGA1O94964 1423 aa37.23■■■■□ 3.55
ACAA1-219ENST00000625927 DNMBPQ6XZF7 1577 aa37.16■■■■□ 3.54
ACAA1-219ENST00000625927 TOPBP1Q92547 1522 aa37.13■■■■□ 3.53
ACAA1-219ENST00000625927 LOC105371045A0A1W2PR82 267 aa37.13■■■■□ 3.53
ACAA1-219ENST00000625927 RUSC2Q8N2Y8 1516 aa37.13■■■■□ 3.53
ACAA1-219ENST00000625927 URB2Q14146 1524 aaKnown RBP37.11■■■■□ 3.53
ACAA1-219ENST00000625927 FGD5Q6ZNL6 1462 aa37.08■■■■□ 3.53
ACAA1-219ENST00000625927 EEA1Q15075 1411 aa37.02■■■■□ 3.52
ACAA1-219ENST00000625927 ERCC6Q03468 1493 aa37.01■■■■□ 3.52
ACAA1-219ENST00000625927 EHMT2Q96KQ7 1210 aa36.98■■■■□ 3.51
ACAA1-219ENST00000625927 MRC2Q9UBG0 1479 aa36.96■■■■□ 3.51
ACAA1-219ENST00000625927 POLA1P09884 1462 aaPredicted RBP36.93■■■■□ 3.5
ACAA1-219ENST00000625927 CSRNP3Q8WYN3 585 aa36.93■■■■□ 3.5
ACAA1-219ENST00000625927 RAD54L2Q9Y4B4 1467 aa36.86■■■■□ 3.49
ACAA1-219ENST00000625927 KIF27Q86VH2 1401 aa36.82■■■■□ 3.48
ACAA1-219ENST00000625927 CUX2O14529 1486 aa36.81■■■■□ 3.48
ACAA1-219ENST00000625927 WDR62O43379 1518 aa36.75■■■■□ 3.47
ACAA1-219ENST00000625927 THOC2Q8NI27 1593 aaKnown RBP36.71■■■■□ 3.47
ACAA1-219ENST00000625927 ABCA10Q8WWZ4 1543 aa36.7■■■■□ 3.47
ACAA1-219ENST00000625927 WDR97A6NE52 1622 aa36.59■■■■□ 3.45
ACAA1-219ENST00000625927 KIF21BO75037 1637 aa36.57■■■■□ 3.44
ACAA1-219ENST00000625927 TARBP1Q13395 1621 aaKnown RBP36.56■■■■□ 3.44
ACAA1-219ENST00000625927 GOLGA3Q08378 1498 aa36.55■■■■□ 3.44
ACAA1-219ENST00000625927 TDRD9Q8NDG6 1382 aaKnown RBP36.53■■■■□ 3.44
ACAA1-219ENST00000625927 IGF1RP08069 1367 aa36.52■■■■□ 3.44
ACAA1-219ENST00000625927 UBTFP17480 764 aaKnown RBP36.5■■■■□ 3.43
ACAA1-219ENST00000625927 RAPGEF2Q9Y4G8 1499 aa36.48■■■■□ 3.43
ACAA1-219ENST00000625927 PRXQ9BXM0 1461 aa36.47■■■■□ 3.43
ACAA1-219ENST00000625927 IFT140Q96RY7 1462 aa36.46■■■■□ 3.43
ACAA1-219ENST00000625927 ABCA5Q8WWZ7 1642 aa36.43■■■■□ 3.42
ACAA1-219ENST00000625927 GAPVD1Q14C86 1478 aa36.4■■■■□ 3.42
ACAA1-219ENST00000625927 TNIKQ9UKE5 1360 aa36.37■■■■□ 3.41
ACAA1-219ENST00000625927 ERICH3Q5RHP9 1530 aa36.36■■■■□ 3.41
ACAA1-219ENST00000625927 CARMIL1Q5VZK9 1371 aa36.35■■■■□ 3.41
ACAA1-219ENST00000625927 AQRO60306 1485 aaKnown RBP eCLIP36.34■■■■□ 3.418e-7■■■■□ 26.1
ACAA1-219ENST00000625927 ZNF608Q9ULD9 1512 aaPredicted RBP36.32■■■■□ 3.41
ACAA1-219ENST00000625927 CUL7Q14999 1698 aa36.22■■■■□ 3.39
ACAA1-219ENST00000625927 PBRM1Q86U86 1689 aa36.2■■■■□ 3.39
ACAA1-219ENST00000625927 CEP162Q5TB80 1403 aa36.19■■■■□ 3.38
ACAA1-219ENST00000625927 EIF4G3O43432 1585 aaKnown RBP36.16■■■■□ 3.38
ACAA1-219ENST00000625927 GRIN2BQ13224 1484 aa36.15■■■■□ 3.38
ACAA1-219ENST00000625927 RANGAP1P46060 587 aaPredicted RBP36.08■■■■□ 3.37
ACAA1-219ENST00000625927 FHAD1B1AJZ9 1412 aa35.99■■■■□ 3.35
ACAA1-219ENST00000625927 ADAMTS12P58397 1594 aa35.99■■■■□ 3.35
ACAA1-219ENST00000625927 SNAPC4Q5SXM2 1469 aa35.98■■■■□ 3.35
ACAA1-219ENST00000625927 CLIP1P30622 1438 aa35.98■■■■□ 3.35
ACAA1-219ENST00000625927 MAGI1Q96QZ7 1491 aaPredicted RBP35.85■■■■□ 3.33
ACAA1-219ENST00000625927 CTTNBP2Q8WZ74 1663 aa35.8■■■■□ 3.32
ACAA1-219ENST00000625927 CHMP7Q8WUX9 453 aaPredicted RBP35.74■■■■□ 3.31
ACAA1-219ENST00000625927 SYNJ2O15056 1496 aa35.73■■■■□ 3.31
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms