RNA–Protein interactions for RNA: ENST00000606198.5

ZKSCAN8-204, Transcript of zinc finger with KRAB and SCAN domains 8, humanhuman

TSL 1 (best)

Gene ZKSCAN8, Length 2,057 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZKSCAN8-204ENST00000606198 NISCHQ9Y2I1 1504 aa18.6■□□□□ 0.57
ZKSCAN8-204ENST00000606198 CCDC180Q9P1Z9 1646 aa15.99■□□□□ 0.15
ZKSCAN8-204ENST00000606198 ZCCHC6Q5VYS8 1495 aaKnown RBP15.73■□□□□ 0.11
ZKSCAN8-204ENST00000606198 SHROOM4Q9ULL8 1493 aa15.64■□□□□ 0.09
ZKSCAN8-204ENST00000606198 DCAF1Q9Y4B6 1507 aa15.28■□□□□ 0.04
ZKSCAN8-204ENST00000606198 DCAF8L2P0C7V8 631 aa15.28■□□□□ 0.04
ZKSCAN8-204ENST00000606198 SUPT5HO00267 1087 aaKnown RBP15.18■□□□□ 0.02
ZKSCAN8-204ENST00000606198 SCRIBQ14160 1630 aa14.91□□□□□ -0.02
ZKSCAN8-204ENST00000606198 MYO15BQ96JP2 1530 aa14.9□□□□□ -0.02
ZKSCAN8-204ENST00000606198 ABCC9O60706 1549 aa14.86□□□□□ -0.03
ZKSCAN8-204ENST00000606198 NACADO15069 1562 aa14.75□□□□□ -0.05
ZKSCAN8-204ENST00000606198 CHIC1Q5VXU3 224 aa14.72□□□□□ -0.05
ZKSCAN8-204ENST00000606198 RSF1Q96T23 1441 aaPredicted RBP14.62□□□□□ -0.07
ZKSCAN8-204ENST00000606198 RB1CC1Q8TDY2 1594 aa14.55□□□□□ -0.08
ZKSCAN8-204ENST00000606198 CECR2Q9BXF3 1484 aa14.53□□□□□ -0.08
ZKSCAN8-204ENST00000606198 UNC13AQ9UPW8 1703 aa14.48□□□□□ -0.09
ZKSCAN8-204ENST00000606198 MROH2BQ7Z745 1585 aa14.47□□□□□ -0.09
ZKSCAN8-204ENST00000606198 WIZO95785 1651 aa14.42□□□□□ -0.1
ZKSCAN8-204ENST00000606198 BAZ1AQ9NRL2 1556 aaPredicted RBP14.31□□□□□ -0.12
ZKSCAN8-204ENST00000606198 LOC105371045A0A1W2PR82 267 aa14.26□□□□□ -0.13
ZKSCAN8-204ENST00000606198 SMARCA4P51532 1647 aa14.25□□□□□ -0.13
ZKSCAN8-204ENST00000606198 BICRAQ9NZM4 1560 aa14.23□□□□□ -0.13
ZKSCAN8-204ENST00000606198 EIF4G1Q04637 1599 aaKnown RBP14.21□□□□□ -0.14
ZKSCAN8-204ENST00000606198 TOP2AP11388 1531 aaKnown RBP14.16□□□□□ -0.14
ZKSCAN8-204ENST00000606198 TRIM41Q8WV44 630 aa14.14□□□□□ -0.15
ZKSCAN8-204ENST00000606198 PABPN1Q86U42 306 aaKnown RBP eCLIP14.11□□□□□ -0.15
ZKSCAN8-204ENST00000606198 SMARCA2P51531 1590 aa14.09□□□□□ -0.15
ZKSCAN8-204ENST00000606198 CCDC88BA6NC98 1476 aa14.05□□□□□ -0.16
ZKSCAN8-204ENST00000606198 FAM9AQ8IZU1 332 aaPredicted RBP14.03□□□□□ -0.16
ZKSCAN8-204ENST00000606198 PCGF6Q9BYE7 350 aa14.02□□□□□ -0.17
ZKSCAN8-204ENST00000606198 ABCC8Q09428 1581 aa14□□□□□ -0.17
ZKSCAN8-204ENST00000606198 PEG3Q9GZU2 1588 aa13.99□□□□□ -0.17
ZKSCAN8-204ENST00000606198 HRCP23327 699 aa13.92□□□□□ -0.18
ZKSCAN8-204ENST00000606198 EHMT2Q96KQ7 1210 aa13.91□□□□□ -0.18
ZKSCAN8-204ENST00000606198 ATAD2BQ9ULI0 1458 aa13.87□□□□□ -0.19
ZKSCAN8-204ENST00000606198 BAZ1BQ9UIG0 1483 aaKnown RBP13.81□□□□□ -0.2
ZKSCAN8-204ENST00000606198 TRIM26Q12899 539 aaPredicted RBP13.79□□□□□ -0.2
ZKSCAN8-204ENST00000606198 SOGA1O94964 1423 aa13.78□□□□□ -0.2
ZKSCAN8-204ENST00000606198 SYNJ1O43426 1573 aa13.75□□□□□ -0.21
ZKSCAN8-204ENST00000606198 RUSC2Q8N2Y8 1516 aa13.75□□□□□ -0.21
ZKSCAN8-204ENST00000606198 WRNQ14191 1432 aaPredicted RBP eCLIP13.72□□□□□ -0.21
ZKSCAN8-204ENST00000606198 PPARGC1BQ86YN6 1023 aaKnown RBP13.69□□□□□ -0.22
ZKSCAN8-204ENST00000606198 HMGXB3Q12766 1538 aa13.66□□□□□ -0.22
ZKSCAN8-204ENST00000606198 EEA1Q15075 1411 aa13.63□□□□□ -0.23
ZKSCAN8-204ENST00000606198 NCAPD3P42695 1498 aa13.62□□□□□ -0.23
ZKSCAN8-204ENST00000606198 CEP162Q5TB80 1403 aa13.61□□□□□ -0.23
ZKSCAN8-204ENST00000606198 CSRNP3Q8WYN3 585 aa13.59□□□□□ -0.23
ZKSCAN8-204ENST00000606198 TOP2BQ02880 1626 aa13.58□□□□□ -0.24
ZKSCAN8-204ENST00000606198 TNIKQ9UKE5 1360 aa13.58□□□□□ -0.24
ZKSCAN8-204ENST00000606198 BIVM-ERCC5R4GMW8 1640 aa13.57□□□□□ -0.24
ZKSCAN8-204ENST00000606198 GOLGA3Q08378 1498 aa13.56□□□□□ -0.24
ZKSCAN8-204ENST00000606198 KIF21BO75037 1637 aa13.56□□□□□ -0.24
ZKSCAN8-204ENST00000606198 PRDM2Q13029 1718 aa13.5□□□□□ -0.25
ZKSCAN8-204ENST00000606198 CEP164Q9UPV0 1460 aa13.5□□□□□ -0.25
ZKSCAN8-204ENST00000606198 CUX1P39880 1505 aa13.49□□□□□ -0.25
ZKSCAN8-204ENST00000606198 UBTFP17480 764 aaKnown RBP13.49□□□□□ -0.25
ZKSCAN8-204ENST00000606198 CFTRP13569 1480 aa13.48□□□□□ -0.25
ZKSCAN8-204ENST00000606198 RAPGEF2Q9Y4G8 1499 aa13.46□□□□□ -0.25
ZKSCAN8-204ENST00000606198 CC2D2AQ9P2K1 1620 aa13.44□□□□□ -0.26
ZKSCAN8-204ENST00000606198 TTBK1Q5TCY1 1321 aaPredicted RBP13.42□□□□□ -0.26
ZKSCAN8-204ENST00000606198 CLIP1P30622 1438 aa13.38□□□□□ -0.27
ZKSCAN8-204ENST00000606198 PRXQ9BXM0 1461 aa13.36□□□□□ -0.27
ZKSCAN8-204ENST00000606198 ERICH3Q5RHP9 1530 aa13.35□□□□□ -0.27
ZKSCAN8-204ENST00000606198 ZEB1P37275 1124 aaPredicted RBP13.35□□□□□ -0.27
ZKSCAN8-204ENST00000606198 VPS8Q8N3P4 1428 aa13.32□□□□□ -0.28
ZKSCAN8-204ENST00000606198 CADPSQ9ULU8 1353 aa13.32□□□□□ -0.28
ZKSCAN8-204ENST00000606198 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.3□□□□□ -0.28
ZKSCAN8-204ENST00000606198 KIF27Q86VH2 1401 aa13.28□□□□□ -0.28
ZKSCAN8-204ENST00000606198 RANGAP1P46060 587 aaPredicted RBP13.28□□□□□ -0.28
ZKSCAN8-204ENST00000606198 ARAP1Q96P48 1450 aa13.26□□□□□ -0.29
ZKSCAN8-204ENST00000606198 FGD5Q6ZNL6 1462 aa13.25□□□□□ -0.29
ZKSCAN8-204ENST00000606198 CUX2O14529 1486 aa13.23□□□□□ -0.29
ZKSCAN8-204ENST00000606198 NESP48681 1621 aa13.22□□□□□ -0.29
ZKSCAN8-204ENST00000606198 FANCD2Q9BXW9 1451 aa13.22□□□□□ -0.29
ZKSCAN8-204ENST00000606198 CCER1Q8TC90 406 aaPredicted RBP13.21□□□□□ -0.29
ZKSCAN8-204ENST00000606198 DNMBPQ6XZF7 1577 aa13.17□□□□□ -0.3
ZKSCAN8-204ENST00000606198 IGF1RP08069 1367 aa13.17□□□□□ -0.3
ZKSCAN8-204ENST00000606198 ARHGAP35Q9NRY4 1499 aa13.16□□□□□ -0.3
ZKSCAN8-204ENST00000606198 TOPBP1Q92547 1522 aa13.14□□□□□ -0.31
ZKSCAN8-204ENST00000606198 RAD54L2Q9Y4B4 1467 aa13.13□□□□□ -0.31
ZKSCAN8-204ENST00000606198 POLA1P09884 1462 aaPredicted RBP13.12□□□□□ -0.31
ZKSCAN8-204ENST00000606198 DNAJC5BQ9UF47 199 aa13.11□□□□□ -0.31
ZKSCAN8-204ENST00000606198 WDR97A6NE52 1622 aa13.1□□□□□ -0.31
ZKSCAN8-204ENST00000606198 LAMC3Q9Y6N6 1575 aa13.1□□□□□ -0.31
ZKSCAN8-204ENST00000606198 HNRNPUL2Q1KMD3 747 aaKnown RBP13.09□□□□□ -0.31
ZKSCAN8-204ENST00000606198 CARMIL1Q5VZK9 1371 aa13.09□□□□□ -0.31
ZKSCAN8-204ENST00000606198 ABCA10Q8WWZ4 1543 aa13.09□□□□□ -0.31
ZKSCAN8-204ENST00000606198 APLP2Q06481 763 aa13.09□□□□□ -0.31
ZKSCAN8-204ENST00000606198 URB2Q14146 1524 aaKnown RBP13.08□□□□□ -0.31
ZKSCAN8-204ENST00000606198 KANK4Q5T7N3 995 aaPredicted RBP13.08□□□□□ -0.32
ZKSCAN8-204ENST00000606198 KIF21AQ7Z4S6 1674 aa13.07□□□□□ -0.32
ZKSCAN8-204ENST00000606198 CUL7Q14999 1698 aa13.02□□□□□ -0.32
ZKSCAN8-204ENST00000606198 CTTNBP2Q8WZ74 1663 aa13.02□□□□□ -0.33
ZKSCAN8-204ENST00000606198 ABCA5Q8WWZ7 1642 aa13.01□□□□□ -0.33
ZKSCAN8-204ENST00000606198 TIAM1Q13009 1591 aa13□□□□□ -0.33
ZKSCAN8-204ENST00000606198 PCF11O94913 1555 aaKnown RBP12.99□□□□□ -0.33
ZKSCAN8-204ENST00000606198 RRBP1Q9P2E9 1410 aaKnown RBP12.99□□□□□ -0.33
ZKSCAN8-204ENST00000606198 CFAP43Q8NDM7 1665 aa12.97□□□□□ -0.33
ZKSCAN8-204ENST00000606198 PDS5BQ9NTI5 1447 aa12.94□□□□□ -0.34
ZKSCAN8-204ENST00000606198 MAP3K1Q13233 1512 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms