RNA–Protein interactions for RNA: ENST00000333167.12

ACAA1-202, Transcript of acetyl-CoA acyltransferase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ACAA1, Length 1,785 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACAA1-202ENST00000333167 NISCHQ9Y2I1 1504 aa48.4■■■■■ 5.34
ACAA1-202ENST00000333167 CCDC180Q9P1Z9 1646 aa42.1■■■■■ 4.33
ACAA1-202ENST00000333167 ZCCHC6Q5VYS8 1495 aaKnown RBP40.68■■■■■ 4.1
ACAA1-202ENST00000333167 DCAF1Q9Y4B6 1507 aa39.98■■■■□ 3.99
ACAA1-202ENST00000333167 DCAF8L2P0C7V8 631 aa39.92■■■■□ 3.98
ACAA1-202ENST00000333167 ABCC9O60706 1549 aa39.82■■■■□ 3.96
ACAA1-202ENST00000333167 SHROOM4Q9ULL8 1493 aa39.59■■■■□ 3.93
ACAA1-202ENST00000333167 MYO15BQ96JP2 1530 aa39.46■■■■□ 3.91
ACAA1-202ENST00000333167 NACADO15069 1562 aa39.2■■■■□ 3.87
ACAA1-202ENST00000333167 RB1CC1Q8TDY2 1594 aa38.84■■■■□ 3.81
ACAA1-202ENST00000333167 SCRIBQ14160 1630 aa38.8■■■■□ 3.8
ACAA1-202ENST00000333167 SUPT5HO00267 1087 aaKnown RBP38.09■■■■□ 3.69
ACAA1-202ENST00000333167 UNC13AQ9UPW8 1703 aa38.09■■■■□ 3.69
ACAA1-202ENST00000333167 BICRAQ9NZM4 1560 aa37.76■■■■□ 3.63
ACAA1-202ENST00000333167 CECR2Q9BXF3 1484 aa37.66■■■■□ 3.62
ACAA1-202ENST00000333167 RSF1Q96T23 1441 aaPredicted RBP37.61■■■■□ 3.61
ACAA1-202ENST00000333167 PABPN1Q86U42 306 aaKnown RBP eCLIP37.6■■■■□ 3.611e-7■□□□□ 9.6
ACAA1-202ENST00000333167 MROH2BQ7Z745 1585 aa37.44■■■■□ 3.58
ACAA1-202ENST00000333167 BAZ1AQ9NRL2 1556 aaPredicted RBP37.33■■■■□ 3.57
ACAA1-202ENST00000333167 SMARCA4P51532 1647 aa37.17■■■■□ 3.54
ACAA1-202ENST00000333167 WIZO95785 1651 aa37.11■■■■□ 3.53
ACAA1-202ENST00000333167 TOP2AP11388 1531 aaKnown RBP36.71■■■■□ 3.47
ACAA1-202ENST00000333167 PEG3Q9GZU2 1588 aa36.71■■■■□ 3.47
ACAA1-202ENST00000333167 ATAD2BQ9ULI0 1458 aa36.57■■■■□ 3.44
ACAA1-202ENST00000333167 EIF4G1Q04637 1599 aaKnown RBP36.56■■■■□ 3.44
ACAA1-202ENST00000333167 CHIC1Q5VXU3 224 aa36.54■■■■□ 3.44
ACAA1-202ENST00000333167 SMARCA2P51531 1590 aa36.49■■■■□ 3.43
ACAA1-202ENST00000333167 CCDC88BA6NC98 1476 aa36.37■■■■□ 3.41
ACAA1-202ENST00000333167 BAZ1BQ9UIG0 1483 aaKnown RBP36.33■■■■□ 3.41
ACAA1-202ENST00000333167 NCAPD3P42695 1498 aa36.22■■■■□ 3.39
ACAA1-202ENST00000333167 HMGXB3Q12766 1538 aa36.15■■■■□ 3.38
ACAA1-202ENST00000333167 CC2D2AQ9P2K1 1620 aa36.01■■■■□ 3.36
ACAA1-202ENST00000333167 TRIM41Q8WV44 630 aa35.77■■■■□ 3.32
ACAA1-202ENST00000333167 ABCC8Q09428 1581 aa35.63■■■■□ 3.29
ACAA1-202ENST00000333167 CFTRP13569 1480 aa35.44■■■■□ 3.26
ACAA1-202ENST00000333167 WRNQ14191 1432 aaPredicted RBP eCLIP35.36■■■■□ 3.25
ACAA1-202ENST00000333167 CADPSQ9ULU8 1353 aa35.3■■■■□ 3.24
ACAA1-202ENST00000333167 SYNJ1O43426 1573 aa35.24■■■■□ 3.23
ACAA1-202ENST00000333167 DNAJC5BQ9UF47 199 aa35.2■■■■□ 3.23
ACAA1-202ENST00000333167 PRDM2Q13029 1718 aa35.19■■■■□ 3.22
ACAA1-202ENST00000333167 FAM9AQ8IZU1 332 aaPredicted RBP35.18■■■■□ 3.22
ACAA1-202ENST00000333167 LOC105371045A0A1W2PR82 267 aa35.17■■■■□ 3.22
ACAA1-202ENST00000333167 TOP2BQ02880 1626 aa35.06■■■■□ 3.2
ACAA1-202ENST00000333167 BIVM-ERCC5R4GMW8 1640 aa35.02■■■■□ 3.2
ACAA1-202ENST00000333167 NESP48681 1621 aa35.01■■■■□ 3.2
ACAA1-202ENST00000333167 SOGA1O94964 1423 aa34.99■■■■□ 3.19
ACAA1-202ENST00000333167 CUX1P39880 1505 aa34.99■■■■□ 3.19
ACAA1-202ENST00000333167 LAMC3Q9Y6N6 1575 aa34.93■■■■□ 3.18
ACAA1-202ENST00000333167 FANCD2Q9BXW9 1451 aa34.91■■■■□ 3.18
ACAA1-202ENST00000333167 RUSC2Q8N2Y8 1516 aa34.89■■■■□ 3.18
ACAA1-202ENST00000333167 EEA1Q15075 1411 aa34.85■■■■□ 3.17
ACAA1-202ENST00000333167 CSRNP3Q8WYN3 585 aa34.7■■■■□ 3.15
ACAA1-202ENST00000333167 EHMT2Q96KQ7 1210 aa34.69■■■■□ 3.14
ACAA1-202ENST00000333167 PDS5BQ9NTI5 1447 aa34.66■■■■□ 3.14
ACAA1-202ENST00000333167 CEP164Q9UPV0 1460 aa34.66■■■■□ 3.14
ACAA1-202ENST00000333167 DNMBPQ6XZF7 1577 aa34.6■■■■□ 3.13
ACAA1-202ENST00000333167 FGD5Q6ZNL6 1462 aa34.57■■■■□ 3.13
ACAA1-202ENST00000333167 TOPBP1Q92547 1522 aa34.56■■■■□ 3.12
ACAA1-202ENST00000333167 KIF21AQ7Z4S6 1674 aa34.53■■■■□ 3.12
ACAA1-202ENST00000333167 URB2Q14146 1524 aaKnown RBP34.51■■■■□ 3.12
ACAA1-202ENST00000333167 KIF27Q86VH2 1401 aa34.44■■■■□ 3.1
ACAA1-202ENST00000333167 KIF21BO75037 1637 aa34.43■■■■□ 3.1
ACAA1-202ENST00000333167 GOLGA3Q08378 1498 aa34.41■■■■□ 3.1
ACAA1-202ENST00000333167 POLA1P09884 1462 aaPredicted RBP34.39■■■■□ 3.1
ACAA1-202ENST00000333167 CUX2O14529 1486 aa34.36■■■■□ 3.09
ACAA1-202ENST00000333167 TNIKQ9UKE5 1360 aa34.34■■■■□ 3.09
ACAA1-202ENST00000333167 RAD54L2Q9Y4B4 1467 aa34.32■■■■□ 3.08
ACAA1-202ENST00000333167 PRXQ9BXM0 1461 aa34.27■■■■□ 3.08
ACAA1-202ENST00000333167 RAPGEF2Q9Y4G8 1499 aa34.26■■■■□ 3.08
ACAA1-202ENST00000333167 ABCA10Q8WWZ4 1543 aa34.26■■■■□ 3.07
ACAA1-202ENST00000333167 MRC2Q9UBG0 1479 aa34.25■■■■□ 3.07
ACAA1-202ENST00000333167 UBTFP17480 764 aaKnown RBP34.23■■■■□ 3.07
ACAA1-202ENST00000333167 IGF1RP08069 1367 aa34.18■■■■□ 3.06
ACAA1-202ENST00000333167 ERICH3Q5RHP9 1530 aa34.17■■■■□ 3.06
ACAA1-202ENST00000333167 CEP162Q5TB80 1403 aa34.17■■■■□ 3.06
ACAA1-202ENST00000333167 WDR97A6NE52 1622 aa34.14■■■■□ 3.06
ACAA1-202ENST00000333167 ERCC6Q03468 1493 aa34.07■■■■□ 3.04
ACAA1-202ENST00000333167 WDR62O43379 1518 aa34.06■■■■□ 3.04
ACAA1-202ENST00000333167 TARBP1Q13395 1621 aaKnown RBP34.04■■■■□ 3.04
ACAA1-202ENST00000333167 ABCA5Q8WWZ7 1642 aa33.98■■■■□ 3.03
ACAA1-202ENST00000333167 CARMIL1Q5VZK9 1371 aa33.98■■■■□ 3.03
ACAA1-202ENST00000333167 THOC2Q8NI27 1593 aaKnown RBP33.96■■■■□ 3.03
ACAA1-202ENST00000333167 TDRD9Q8NDG6 1382 aaKnown RBP33.96■■■■□ 3.03
ACAA1-202ENST00000333167 GAPVD1Q14C86 1478 aa33.89■■■■□ 3.02
ACAA1-202ENST00000333167 CLIP1P30622 1438 aa33.88■■■■□ 3.01
ACAA1-202ENST00000333167 CUL7Q14999 1698 aa33.83■■■■□ 3.01
ACAA1-202ENST00000333167 IFT140Q96RY7 1462 aa33.83■■■■□ 3.01
ACAA1-202ENST00000333167 AQRO60306 1485 aaKnown RBP eCLIP33.73■■■□□ 2.998e-7■■■■□ 26.1
ACAA1-202ENST00000333167 ZNF608Q9ULD9 1512 aaPredicted RBP33.7■■■□□ 2.99
ACAA1-202ENST00000333167 RANGAP1P46060 587 aaPredicted RBP33.7■■■□□ 2.98
ACAA1-202ENST00000333167 PBRM1Q86U86 1689 aa33.67■■■□□ 2.98
ACAA1-202ENST00000333167 GRIN2BQ13224 1484 aa33.61■■■□□ 2.97
ACAA1-202ENST00000333167 VPS8Q8N3P4 1428 aa33.58■■■□□ 2.97
ACAA1-202ENST00000333167 ARAP1Q96P48 1450 aa33.58■■■□□ 2.97
ACAA1-202ENST00000333167 PCGF6Q9BYE7 350 aa33.57■■■□□ 2.97
ACAA1-202ENST00000333167 EIF4G3O43432 1585 aaKnown RBP33.54■■■□□ 2.96
ACAA1-202ENST00000333167 TRIM26Q12899 539 aaPredicted RBP33.54■■■□□ 2.96
ACAA1-202ENST00000333167 ARHGAP35Q9NRY4 1499 aa33.54■■■□□ 2.96
ACAA1-202ENST00000333167 ADAMTS12P58397 1594 aa33.53■■■□□ 2.96
ACAA1-202ENST00000333167 FHAD1B1AJZ9 1412 aa33.52■■■□□ 2.96
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms