RNA–Protein interactions for RNA: ENST00000626782.2

CHD2-207, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 2 BASIC

Gene CHD2, Length 2,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-207ENST00000626782 NISCHQ9Y2I1 1504 aa23.25■■□□□ 1.31
CHD2-207ENST00000626782 CCDC180Q9P1Z9 1646 aa20.19■□□□□ 0.82
CHD2-207ENST00000626782 ZCCHC6Q5VYS8 1495 aaKnown RBP19.57■□□□□ 0.72
CHD2-207ENST00000626782 ABCC9O60706 1549 aa19.33■□□□□ 0.68
CHD2-207ENST00000626782 DCAF8L2P0C7V8 631 aa19.23■□□□□ 0.67
CHD2-207ENST00000626782 DCAF1Q9Y4B6 1507 aa19.18■□□□□ 0.66
CHD2-207ENST00000626782 SHROOM4Q9ULL8 1493 aa19.11■□□□□ 0.65
CHD2-207ENST00000626782 MYO15BQ96JP2 1530 aa18.88■□□□□ 0.61
CHD2-207ENST00000626782 NACADO15069 1562 aa18.74■□□□□ 0.59
CHD2-207ENST00000626782 SCRIBQ14160 1630 aa18.65■□□□□ 0.58
CHD2-207ENST00000626782 RB1CC1Q8TDY2 1594 aa18.64■□□□□ 0.57
CHD2-207ENST00000626782 SUPT5HO00267 1087 aaKnown RBP18.39■□□□□ 0.53
CHD2-207ENST00000626782 UNC13AQ9UPW8 1703 aa18.35■□□□□ 0.53
CHD2-207ENST00000626782 PABPN1Q86U42 306 aaKnown RBP eCLIP18.25■□□□□ 0.51
CHD2-207ENST00000626782 BICRAQ9NZM4 1560 aa18.19■□□□□ 0.5
CHD2-207ENST00000626782 CECR2Q9BXF3 1484 aa18.12■□□□□ 0.49
CHD2-207ENST00000626782 RSF1Q96T23 1441 aaPredicted RBP18.1■□□□□ 0.49
CHD2-207ENST00000626782 MROH2BQ7Z745 1585 aa18.02■□□□□ 0.47
CHD2-207ENST00000626782 BAZ1AQ9NRL2 1556 aaPredicted RBP17.9■□□□□ 0.46
CHD2-207ENST00000626782 WIZO95785 1651 aa17.89■□□□□ 0.45
CHD2-207ENST00000626782 SMARCA4P51532 1647 aa17.87■□□□□ 0.45
CHD2-207ENST00000626782 CHIC1Q5VXU3 224 aa17.69■□□□□ 0.42
CHD2-207ENST00000626782 TOP2AP11388 1531 aaKnown RBP17.64■□□□□ 0.41
CHD2-207ENST00000626782 PEG3Q9GZU2 1588 aa17.63■□□□□ 0.41
CHD2-207ENST00000626782 EIF4G1Q04637 1599 aaKnown RBP17.61■□□□□ 0.41
CHD2-207ENST00000626782 ATAD2BQ9ULI0 1458 aa17.52■□□□□ 0.4
CHD2-207ENST00000626782 SMARCA2P51531 1590 aa17.52■□□□□ 0.4
CHD2-207ENST00000626782 CCDC88BA6NC98 1476 aa17.48■□□□□ 0.39
CHD2-207ENST00000626782 CC2D2AQ9P2K1 1620 aa17.43■□□□□ 0.38
CHD2-207ENST00000626782 BAZ1BQ9UIG0 1483 aaKnown RBP17.4■□□□□ 0.38
CHD2-207ENST00000626782 NCAPD3P42695 1498 aa17.33■□□□□ 0.37
CHD2-207ENST00000626782 HMGXB3Q12766 1538 aa17.31■□□□□ 0.36
CHD2-207ENST00000626782 DNAJC5BQ9UF47 199 aa17.31■□□□□ 0.36
CHD2-207ENST00000626782 TRIM41Q8WV44 630 aa17.23■□□□□ 0.35
CHD2-207ENST00000626782 ABCC8Q09428 1581 aa17.21■□□□□ 0.35
CHD2-207ENST00000626782 LOC105371045A0A1W2PR82 267 aa17.06■□□□□ 0.32
CHD2-207ENST00000626782 SYNJ1O43426 1573 aa17■□□□□ 0.31
CHD2-207ENST00000626782 WRNQ14191 1432 aaPredicted RBP eCLIP17■□□□□ 0.31
CHD2-207ENST00000626782 CFTRP13569 1480 aa16.99■□□□□ 0.31
CHD2-207ENST00000626782 FAM9AQ8IZU1 332 aaPredicted RBP16.98■□□□□ 0.31
CHD2-207ENST00000626782 NESP48681 1621 aa16.94■□□□□ 0.3
CHD2-207ENST00000626782 PRDM2Q13029 1718 aa16.93■□□□□ 0.3
CHD2-207ENST00000626782 CADPSQ9ULU8 1353 aa16.91■□□□□ 0.3
CHD2-207ENST00000626782 SOGA1O94964 1423 aa16.89■□□□□ 0.3
CHD2-207ENST00000626782 TOP2BQ02880 1626 aa16.87■□□□□ 0.29
CHD2-207ENST00000626782 BIVM-ERCC5R4GMW8 1640 aa16.86■□□□□ 0.29
CHD2-207ENST00000626782 RUSC2Q8N2Y8 1516 aa16.86■□□□□ 0.29
CHD2-207ENST00000626782 CUX1P39880 1505 aa16.83■□□□□ 0.28
CHD2-207ENST00000626782 EHMT2Q96KQ7 1210 aa16.78■□□□□ 0.28
CHD2-207ENST00000626782 EEA1Q15075 1411 aa16.74■□□□□ 0.27
CHD2-207ENST00000626782 LAMC3Q9Y6N6 1575 aa16.74■□□□□ 0.27
CHD2-207ENST00000626782 FANCD2Q9BXW9 1451 aa16.74■□□□□ 0.27
CHD2-207ENST00000626782 CSRNP3Q8WYN3 585 aa16.68■□□□□ 0.26
CHD2-207ENST00000626782 KIF21AQ7Z4S6 1674 aa16.66■□□□□ 0.26
CHD2-207ENST00000626782 PDS5BQ9NTI5 1447 aa16.64■□□□□ 0.25
CHD2-207ENST00000626782 CEP164Q9UPV0 1460 aa16.62■□□□□ 0.25
CHD2-207ENST00000626782 KIF21BO75037 1637 aa16.61■□□□□ 0.25
CHD2-207ENST00000626782 FGD5Q6ZNL6 1462 aa16.6■□□□□ 0.25
CHD2-207ENST00000626782 DNMBPQ6XZF7 1577 aa16.58■□□□□ 0.25
CHD2-207ENST00000626782 URB2Q14146 1524 aaKnown RBP16.58■□□□□ 0.24
CHD2-207ENST00000626782 GOLGA3Q08378 1498 aa16.57■□□□□ 0.24
CHD2-207ENST00000626782 TOPBP1Q92547 1522 aa16.56■□□□□ 0.24
CHD2-207ENST00000626782 TNIKQ9UKE5 1360 aa16.54■□□□□ 0.24
CHD2-207ENST00000626782 RAPGEF2Q9Y4G8 1499 aa16.53■□□□□ 0.24
CHD2-207ENST00000626782 ERCC6Q03468 1493 aa16.52■□□□□ 0.23
CHD2-207ENST00000626782 KIF27Q86VH2 1401 aa16.51■□□□□ 0.23
CHD2-207ENST00000626782 CEP162Q5TB80 1403 aa16.51■□□□□ 0.23
CHD2-207ENST00000626782 POLA1P09884 1462 aaPredicted RBP16.5■□□□□ 0.23
CHD2-207ENST00000626782 PRXQ9BXM0 1461 aa16.5■□□□□ 0.23
CHD2-207ENST00000626782 CUX2O14529 1486 aa16.49■□□□□ 0.23
CHD2-207ENST00000626782 RAD54L2Q9Y4B4 1467 aa16.47■□□□□ 0.23
CHD2-207ENST00000626782 UBTFP17480 764 aaKnown RBP16.46■□□□□ 0.23
CHD2-207ENST00000626782 MRC2Q9UBG0 1479 aa16.46■□□□□ 0.23
CHD2-207ENST00000626782 ERICH3Q5RHP9 1530 aa16.45■□□□□ 0.22
CHD2-207ENST00000626782 WDR97A6NE52 1622 aa16.43■□□□□ 0.22
CHD2-207ENST00000626782 ABCA10Q8WWZ4 1543 aa16.43■□□□□ 0.22
CHD2-207ENST00000626782 IGF1RP08069 1367 aa16.41■□□□□ 0.22
CHD2-207ENST00000626782 THOC2Q8NI27 1593 aaKnown RBP16.4■□□□□ 0.22
CHD2-207ENST00000626782 WDR62O43379 1518 aa16.38■□□□□ 0.21
CHD2-207ENST00000626782 PCGF6Q9BYE7 350 aa16.36■□□□□ 0.21
CHD2-207ENST00000626782 TARBP1Q13395 1621 aaKnown RBP16.35■□□□□ 0.21
CHD2-207ENST00000626782 ABCA5Q8WWZ7 1642 aa16.33■□□□□ 0.2
CHD2-207ENST00000626782 CLIP1P30622 1438 aa16.33■□□□□ 0.2
CHD2-207ENST00000626782 TDRD9Q8NDG6 1382 aaKnown RBP16.32■□□□□ 0.2
CHD2-207ENST00000626782 CARMIL1Q5VZK9 1371 aa16.3■□□□□ 0.2
CHD2-207ENST00000626782 TRIM26Q12899 539 aaPredicted RBP16.27■□□□□ 0.19
CHD2-207ENST00000626782 ZNF608Q9ULD9 1512 aaPredicted RBP16.26■□□□□ 0.19
CHD2-207ENST00000626782 PPARGC1BQ86YN6 1023 aaKnown RBP16.26■□□□□ 0.19
CHD2-207ENST00000626782 CUL7Q14999 1698 aa16.25■□□□□ 0.19
CHD2-207ENST00000626782 AQRO60306 1485 aaKnown RBP eCLIP16.24■□□□□ 0.191e-7■■■□□ 16.7
CHD2-207ENST00000626782 GAPVD1Q14C86 1478 aa16.23■□□□□ 0.19
CHD2-207ENST00000626782 RANGAP1P46060 587 aaPredicted RBP16.22■□□□□ 0.19
CHD2-207ENST00000626782 ARAP1Q96P48 1450 aa16.21■□□□□ 0.19
CHD2-207ENST00000626782 IFT140Q96RY7 1462 aa16.21■□□□□ 0.19
CHD2-207ENST00000626782 VPS8Q8N3P4 1428 aa16.2■□□□□ 0.18
CHD2-207ENST00000626782 PBRM1Q86U86 1689 aa16.19■□□□□ 0.18
CHD2-207ENST00000626782 ARHGAP35Q9NRY4 1499 aa16.18■□□□□ 0.18
CHD2-207ENST00000626782 CTTNBP2Q8WZ74 1663 aa16.13■□□□□ 0.17
CHD2-207ENST00000626782 EIF4G3O43432 1585 aaKnown RBP16.13■□□□□ 0.17
CHD2-207ENST00000626782 ADAMTS12P58397 1594 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms