RNA–Protein interactions for RNA: ENST00000428687.1

AL390728.5-201, humanhuman

TSL 3 BASIC

Gene AL390728.5, Length 706 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL390728.5-201ENST00000428687 NISCHQ9Y2I1 1504 aa48.42■■■■■ 5.34
AL390728.5-201ENST00000428687 CCDC180Q9P1Z9 1646 aa43.32■■■■■ 4.53
AL390728.5-201ENST00000428687 ABCC9O60706 1549 aa43.1■■■■■ 4.49
AL390728.5-201ENST00000428687 RB1CC1Q8TDY2 1594 aa41.11■■■■■ 4.17
AL390728.5-201ENST00000428687 NACADO15069 1562 aa40.89■■■■■ 4.14
AL390728.5-201ENST00000428687 DCAF8L2P0C7V8 631 aa40.74■■■■■ 4.11
AL390728.5-201ENST00000428687 MYO15BQ96JP2 1530 aa40.41■■■■■ 4.06
AL390728.5-201ENST00000428687 ZCCHC6Q5VYS8 1495 aaKnown RBP40.22■■■■■ 4.03
AL390728.5-201ENST00000428687 PABPN1Q86U42 306 aaKnown RBP eCLIP40.16■■■■■ 4.02
AL390728.5-201ENST00000428687 UNC13AQ9UPW8 1703 aa40.14■■■■■ 4.02
AL390728.5-201ENST00000428687 DNAJC5BQ9UF47 199 aa40.14■■■■■ 4.02
AL390728.5-201ENST00000428687 DCAF1Q9Y4B6 1507 aa40.01■■■■□ 3.99
AL390728.5-201ENST00000428687 BICRAQ9NZM4 1560 aa39.92■■■■□ 3.98
AL390728.5-201ENST00000428687 SCRIBQ14160 1630 aa39.54■■■■□ 3.92
AL390728.5-201ENST00000428687 SHROOM4Q9ULL8 1493 aa39.4■■■■□ 3.9
AL390728.5-201ENST00000428687 CC2D2AQ9P2K1 1620 aa38.92■■■■□ 3.82
AL390728.5-201ENST00000428687 EIF4G1Q04637 1599 aaKnown RBP38.91■■■■□ 3.82
AL390728.5-201ENST00000428687 CECR2Q9BXF3 1484 aa38.78■■■■□ 3.8
AL390728.5-201ENST00000428687 NCAPD3P42695 1498 aa37.75■■■■□ 3.63
AL390728.5-201ENST00000428687 SMARCA4P51532 1647 aa37.72■■■■□ 3.63
AL390728.5-201ENST00000428687 ATAD2BQ9ULI0 1458 aa37.69■■■■□ 3.62
AL390728.5-201ENST00000428687 SMARCA2P51531 1590 aa37.59■■■■□ 3.61
AL390728.5-201ENST00000428687 BAZ1AQ9NRL2 1556 aaPredicted RBP37.57■■■■□ 3.6
AL390728.5-201ENST00000428687 HMGXB3Q12766 1538 aa37.51■■■■□ 3.6
AL390728.5-201ENST00000428687 BAZ1BQ9UIG0 1483 aaKnown RBP37.35■■■■□ 3.57
AL390728.5-201ENST00000428687 MROH2BQ7Z745 1585 aa37.34■■■■□ 3.57
AL390728.5-201ENST00000428687 PEG3Q9GZU2 1588 aa37.34■■■■□ 3.57
AL390728.5-201ENST00000428687 ERCC6Q03468 1493 aa37.19■■■■□ 3.54
AL390728.5-201ENST00000428687 NESP48681 1621 aa37.1■■■■□ 3.53
AL390728.5-201ENST00000428687 CUX2O14529 1486 aa37.01■■■■□ 3.51
AL390728.5-201ENST00000428687 WIZO95785 1651 aa36.88■■■■□ 3.49
AL390728.5-201ENST00000428687 LAMC3Q9Y6N6 1575 aa36.85■■■■□ 3.49
AL390728.5-201ENST00000428687 THOC2Q8NI27 1593 aaKnown RBP36.66■■■■□ 3.46
AL390728.5-201ENST00000428687 RSF1Q96T23 1441 aaPredicted RBP36.66■■■■□ 3.46
AL390728.5-201ENST00000428687 DNAJC5Q9H3Z4 198 aa36.64■■■■□ 3.46
AL390728.5-201ENST00000428687 PDS5BQ9NTI5 1447 aa36.64■■■■□ 3.46
AL390728.5-201ENST00000428687 CADPSQ9ULU8 1353 aa36.62■■■■□ 3.45
AL390728.5-201ENST00000428687 KIF21AQ7Z4S6 1674 aa36.6■■■■□ 3.45
AL390728.5-201ENST00000428687 TOP2AP11388 1531 aaKnown RBP36.46■■■■□ 3.43
AL390728.5-201ENST00000428687 MRC2Q9UBG0 1479 aa36.33■■■■□ 3.41
AL390728.5-201ENST00000428687 CFTRP13569 1480 aa36.27■■■■□ 3.4
AL390728.5-201ENST00000428687 CEP164Q9UPV0 1460 aa36.25■■■■□ 3.39
AL390728.5-201ENST00000428687 FANCD2Q9BXW9 1451 aa36.23■■■■□ 3.39
AL390728.5-201ENST00000428687 WDR62O43379 1518 aa36.22■■■■□ 3.39
AL390728.5-201ENST00000428687 CCDC88BA6NC98 1476 aa36.03■■■■□ 3.36
AL390728.5-201ENST00000428687 URB2Q14146 1524 aaKnown RBP35.92■■■■□ 3.34
AL390728.5-201ENST00000428687 PRDM2Q13029 1718 aa35.88■■■■□ 3.34
AL390728.5-201ENST00000428687 TOPBP1Q92547 1522 aa35.57■■■■□ 3.28
AL390728.5-201ENST00000428687 IFT140Q96RY7 1462 aa35.5■■■■□ 3.27
AL390728.5-201ENST00000428687 ABCC8Q09428 1581 aa35.47■■■■□ 3.27
AL390728.5-201ENST00000428687 DNMBPQ6XZF7 1577 aa35.47■■■■□ 3.27
AL390728.5-201ENST00000428687 ZNF608Q9ULD9 1512 aaPredicted RBP35.43■■■■□ 3.26
AL390728.5-201ENST00000428687 OSCARQ8IYS5 282 aa35.33■■■■□ 3.25
AL390728.5-201ENST00000428687 SUPT5HO00267 1087 aaKnown RBP35.25■■■■□ 3.23
AL390728.5-201ENST00000428687 EIF4G3O43432 1585 aaKnown RBP35.25■■■■□ 3.23
AL390728.5-201ENST00000428687 POLA1P09884 1462 aaPredicted RBP35.23■■■■□ 3.23
AL390728.5-201ENST00000428687 TARBP1Q13395 1621 aaKnown RBP35.22■■■■□ 3.23
AL390728.5-201ENST00000428687 TRIM41Q8WV44 630 aa35.2■■■■□ 3.23
AL390728.5-201ENST00000428687 AQRO60306 1485 aaKnown RBP eCLIP35.13■■■■□ 3.21
AL390728.5-201ENST00000428687 RAD54L2Q9Y4B4 1467 aa35.09■■■■□ 3.21
AL390728.5-201ENST00000428687 CUX1P39880 1505 aa35.07■■■■□ 3.21
AL390728.5-201ENST00000428687 SOGA1O94964 1423 aa35.06■■■■□ 3.2
AL390728.5-201ENST00000428687 FGD5Q6ZNL6 1462 aa35.05■■■■□ 3.2
AL390728.5-201ENST00000428687 TDRD9Q8NDG6 1382 aaKnown RBP34.97■■■■□ 3.19
AL390728.5-201ENST00000428687 CHD1O14646 1710 aa34.9■■■■□ 3.18
AL390728.5-201ENST00000428687 RIMBP3CA6NJZ7 1639 aa34.88■■■■□ 3.17
AL390728.5-201ENST00000428687 RIMBP3BA6NNM3 1639 aa34.88■■■■□ 3.17
AL390728.5-201ENST00000428687 RIMBP3Q9UFD9 1639 aa34.88■■■■□ 3.17
AL390728.5-201ENST00000428687 WDR97A6NE52 1622 aa34.87■■■■□ 3.17
AL390728.5-201ENST00000428687 FBLN2P98095 1184 aa34.84■■■■□ 3.17
AL390728.5-201ENST00000428687 ARHGEF11O15085 1522 aa34.81■■■■□ 3.16
AL390728.5-201ENST00000428687 SNAPC4Q5SXM2 1469 aa34.81■■■■□ 3.16
AL390728.5-201ENST00000428687 GRIN2BQ13224 1484 aa34.73■■■■□ 3.15
AL390728.5-201ENST00000428687 MAGI1Q96QZ7 1491 aaPredicted RBP34.71■■■■□ 3.15
AL390728.5-201ENST00000428687 ABCA10Q8WWZ4 1543 aa34.65■■■■□ 3.14
AL390728.5-201ENST00000428687 GAPVD1Q14C86 1478 aa34.65■■■■□ 3.14
AL390728.5-201ENST00000428687 CHMP7Q8WUX9 453 aaPredicted RBP34.62■■■■□ 3.13
AL390728.5-201ENST00000428687 PBRM1Q86U86 1689 aa34.6■■■■□ 3.13
AL390728.5-201ENST00000428687 ABCA5Q8WWZ7 1642 aa34.59■■■■□ 3.13
AL390728.5-201ENST00000428687 SYNJ2O15056 1496 aa34.58■■■■□ 3.13
AL390728.5-201ENST00000428687 WRNQ14191 1432 aaPredicted RBP eCLIP34.58■■■■□ 3.13
AL390728.5-201ENST00000428687 TOP2BQ02880 1626 aa34.56■■■■□ 3.12
AL390728.5-201ENST00000428687 BIVM-ERCC5R4GMW8 1640 aa34.55■■■■□ 3.12
AL390728.5-201ENST00000428687 SYNJ1O43426 1573 aa34.55■■■■□ 3.12
AL390728.5-201ENST00000428687 CLASP1Q7Z460 1538 aa34.54■■■■□ 3.12
AL390728.5-201ENST00000428687 CYB5RLQ6IPT4 315 aa34.51■■■■□ 3.12
AL390728.5-201ENST00000428687 ARAP1Q96P48 1450 aa34.51■■■■□ 3.11
AL390728.5-201ENST00000428687 ADAMTS12P58397 1594 aa34.32■■■■□ 3.09
AL390728.5-201ENST00000428687 GRIN2AQ12879 1464 aa34.29■■■■□ 3.08
AL390728.5-201ENST00000428687 ERICH3Q5RHP9 1530 aa34.22■■■■□ 3.07
AL390728.5-201ENST00000428687 FHAD1B1AJZ9 1412 aa34.21■■■■□ 3.07
AL390728.5-201ENST00000428687 CEP170Q5SW79 1584 aa34.16■■■■□ 3.06
AL390728.5-201ENST00000428687 NUP160Q12769 1436 aa34.16■■■■□ 3.06
AL390728.5-201ENST00000428687 TRHP20396 242 aaPredicted RBP34.04■■■■□ 3.04
AL390728.5-201ENST00000428687 ERCC6L2Q5T890 1561 aa34.03■■■■□ 3.04
AL390728.5-201ENST00000428687 SHROOM2Q13796 1616 aa33.96■■■■□ 3.03
AL390728.5-201ENST00000428687 KIF27Q86VH2 1401 aa33.89■■■■□ 3.02
AL390728.5-201ENST00000428687 IGF1RP08069 1367 aa33.85■■■■□ 3.01
AL390728.5-201ENST00000428687 RUSC2Q8N2Y8 1516 aa33.84■■■■□ 3.01
AL390728.5-201ENST00000428687 PRG4Q92954 1404 aaPredicted RBP33.81■■■■□ 3
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms