RNA–Protein interactions for RNA: ENST00000409946.5

LRPPRC-203, Transcript of leucine rich pentatricopeptide repeat containing, humanhuman

TSL 1 (best) BASIC

Gene LRPPRC, Length 1,848 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRPPRC-203ENST00000409946 NISCHQ9Y2I1 1504 aa39.73■■■■□ 3.95
LRPPRC-203ENST00000409946 CCDC180Q9P1Z9 1646 aa34.62■■■■□ 3.13
LRPPRC-203ENST00000409946 ZCCHC6Q5VYS8 1495 aaKnown RBP33.4■■■□□ 2.94
LRPPRC-203ENST00000409946 DCAF8L2P0C7V8 631 aa32.86■■■□□ 2.85
LRPPRC-203ENST00000409946 ABCC9O60706 1549 aa32.76■■■□□ 2.83
LRPPRC-203ENST00000409946 DCAF1Q9Y4B6 1507 aa32.75■■■□□ 2.83
LRPPRC-203ENST00000409946 SHROOM4Q9ULL8 1493 aa32.62■■■□□ 2.81
LRPPRC-203ENST00000409946 MYO15BQ96JP2 1530 aa32.3■■■□□ 2.76
LRPPRC-203ENST00000409946 NACADO15069 1562 aa32.17■■■□□ 2.74
LRPPRC-203ENST00000409946 SCRIBQ14160 1630 aa31.97■■■□□ 2.71
LRPPRC-203ENST00000409946 RB1CC1Q8TDY2 1594 aa31.91■■■□□ 2.7
LRPPRC-203ENST00000409946 UNC13AQ9UPW8 1703 aa31.48■■■□□ 2.63
LRPPRC-203ENST00000409946 SUPT5HO00267 1087 aaKnown RBP31.35■■■□□ 2.61
LRPPRC-203ENST00000409946 BICRAQ9NZM4 1560 aa31.04■■■□□ 2.56
LRPPRC-203ENST00000409946 CECR2Q9BXF3 1484 aa30.95■■■□□ 2.55
LRPPRC-203ENST00000409946 PABPN1Q86U42 306 aaKnown RBP eCLIP30.91■■■□□ 2.54
LRPPRC-203ENST00000409946 RSF1Q96T23 1441 aaPredicted RBP30.85■■■□□ 2.53
LRPPRC-203ENST00000409946 MROH2BQ7Z745 1585 aa30.77■■■□□ 2.52
LRPPRC-203ENST00000409946 BAZ1AQ9NRL2 1556 aaPredicted RBP30.65■■■□□ 2.5
LRPPRC-203ENST00000409946 WIZO95785 1651 aa30.58■■■□□ 2.49
LRPPRC-203ENST00000409946 SMARCA4P51532 1647 aa30.58■■■□□ 2.49
LRPPRC-203ENST00000409946 TOP2AP11388 1531 aaKnown RBP30.16■■■□□ 2.42
LRPPRC-203ENST00000409946 PEG3Q9GZU2 1588 aa30.12■■■□□ 2.41
LRPPRC-203ENST00000409946 EIF4G1Q04637 1599 aaKnown RBP30.06■■■□□ 2.4
LRPPRC-203ENST00000409946 ATAD2BQ9ULI0 1458 aa30■■■□□ 2.39
LRPPRC-203ENST00000409946 CHIC1Q5VXU3 224 aa29.99■■■□□ 2.39
LRPPRC-203ENST00000409946 SMARCA2P51531 1590 aa29.96■■■□□ 2.39
LRPPRC-203ENST00000409946 CCDC88BA6NC98 1476 aa29.86■■■□□ 2.37
LRPPRC-203ENST00000409946 BAZ1BQ9UIG0 1483 aaKnown RBP29.85■■■□□ 2.37
LRPPRC-203ENST00000409946 NCAPD3P42695 1498 aa29.68■■■□□ 2.34
LRPPRC-203ENST00000409946 HMGXB3Q12766 1538 aa29.67■■■□□ 2.34
LRPPRC-203ENST00000409946 CC2D2AQ9P2K1 1620 aa29.64■■■□□ 2.34
LRPPRC-203ENST00000409946 TRIM41Q8WV44 630 aa29.38■■■□□ 2.29
LRPPRC-203ENST00000409946 ABCC8Q09428 1581 aa29.36■■■□□ 2.29
LRPPRC-203ENST00000409946 CFTRP13569 1480 aa29.07■■■□□ 2.24
LRPPRC-203ENST00000409946 PRDM2Q13029 1718 aa29.06■■■□□ 2.24
LRPPRC-203ENST00000409946 WRNQ14191 1432 aaPredicted RBP eCLIP29.04■■■□□ 2.24
LRPPRC-203ENST00000409946 SYNJ1O43426 1573 aa29.01■■■□□ 2.23
LRPPRC-203ENST00000409946 FAM9AQ8IZU1 332 aaPredicted RBP28.98■■■□□ 2.23
LRPPRC-203ENST00000409946 DNAJC5BQ9UF47 199 aa28.94■■■□□ 2.22
LRPPRC-203ENST00000409946 CADPSQ9ULU8 1353 aa28.93■■■□□ 2.22
LRPPRC-203ENST00000409946 LOC105371045A0A1W2PR82 267 aa28.93■■■□□ 2.22
LRPPRC-203ENST00000409946 NESP48681 1621 aa28.82■■■□□ 2.2
LRPPRC-203ENST00000409946 TOP2BQ02880 1626 aa28.82■■■□□ 2.2
LRPPRC-203ENST00000409946 BIVM-ERCC5R4GMW8 1640 aa28.81■■■□□ 2.2
LRPPRC-203ENST00000409946 CUX1P39880 1505 aa28.76■■■□□ 2.19
LRPPRC-203ENST00000409946 SOGA1O94964 1423 aa28.76■■■□□ 2.19
LRPPRC-203ENST00000409946 RUSC2Q8N2Y8 1516 aa28.7■■■□□ 2.19
LRPPRC-203ENST00000409946 LAMC3Q9Y6N6 1575 aa28.7■■■□□ 2.18
LRPPRC-203ENST00000409946 FANCD2Q9BXW9 1451 aa28.67■■■□□ 2.18
LRPPRC-203ENST00000409946 EHMT2Q96KQ7 1210 aa28.66■■■□□ 2.18
LRPPRC-203ENST00000409946 EEA1Q15075 1411 aa28.55■■■□□ 2.16
LRPPRC-203ENST00000409946 KIF21AQ7Z4S6 1674 aa28.5■■■□□ 2.15
LRPPRC-203ENST00000409946 CEP164Q9UPV0 1460 aa28.48■■■□□ 2.15
LRPPRC-203ENST00000409946 CSRNP3Q8WYN3 585 aa28.46■■■□□ 2.15
LRPPRC-203ENST00000409946 DNMBPQ6XZF7 1577 aa28.44■■■□□ 2.14
LRPPRC-203ENST00000409946 PDS5BQ9NTI5 1447 aa28.42■■■□□ 2.14
LRPPRC-203ENST00000409946 FGD5Q6ZNL6 1462 aa28.42■■■□□ 2.14
LRPPRC-203ENST00000409946 TOPBP1Q92547 1522 aa28.39■■■□□ 2.13
LRPPRC-203ENST00000409946 URB2Q14146 1524 aaKnown RBP28.35■■■□□ 2.13
LRPPRC-203ENST00000409946 KIF21BO75037 1637 aa28.3■■■□□ 2.12
LRPPRC-203ENST00000409946 GOLGA3Q08378 1498 aa28.26■■■□□ 2.11
LRPPRC-203ENST00000409946 POLA1P09884 1462 aaPredicted RBP28.26■■■□□ 2.11
LRPPRC-203ENST00000409946 KIF27Q86VH2 1401 aa28.25■■■□□ 2.11
LRPPRC-203ENST00000409946 CUX2O14529 1486 aa28.24■■■□□ 2.11
LRPPRC-203ENST00000409946 RAD54L2Q9Y4B4 1467 aa28.21■■■□□ 2.11
LRPPRC-203ENST00000409946 RAPGEF2Q9Y4G8 1499 aa28.17■■■□□ 2.1
LRPPRC-203ENST00000409946 UBTFP17480 764 aaKnown RBP28.15■■■□□ 2.1
LRPPRC-203ENST00000409946 TNIKQ9UKE5 1360 aa28.15■■■□□ 2.1
LRPPRC-203ENST00000409946 WDR97A6NE52 1622 aa28.12■■■□□ 2.09
LRPPRC-203ENST00000409946 MRC2Q9UBG0 1479 aa28.12■■■□□ 2.09
LRPPRC-203ENST00000409946 ABCA10Q8WWZ4 1543 aa28.11■■■□□ 2.09
LRPPRC-203ENST00000409946 PRXQ9BXM0 1461 aa28.11■■■□□ 2.09
LRPPRC-203ENST00000409946 CEP162Q5TB80 1403 aa28.08■■■□□ 2.09
LRPPRC-203ENST00000409946 ERICH3Q5RHP9 1530 aa28.05■■■□□ 2.08
LRPPRC-203ENST00000409946 ERCC6Q03468 1493 aa28.02■■■□□ 2.08
LRPPRC-203ENST00000409946 IGF1RP08069 1367 aa28.01■■■□□ 2.07
LRPPRC-203ENST00000409946 WDR62O43379 1518 aa27.98■■■□□ 2.07
LRPPRC-203ENST00000409946 TARBP1Q13395 1621 aaKnown RBP27.98■■■□□ 2.07
LRPPRC-203ENST00000409946 ABCA5Q8WWZ7 1642 aa27.95■■■□□ 2.06
LRPPRC-203ENST00000409946 THOC2Q8NI27 1593 aaKnown RBP27.94■■■□□ 2.06
LRPPRC-203ENST00000409946 TDRD9Q8NDG6 1382 aaKnown RBP27.9■■■□□ 2.06
LRPPRC-203ENST00000409946 CARMIL1Q5VZK9 1371 aa27.88■■■□□ 2.05
LRPPRC-203ENST00000409946 CUL7Q14999 1698 aa27.83■■■□□ 2.05
LRPPRC-203ENST00000409946 GAPVD1Q14C86 1478 aa27.83■■■□□ 2.05
LRPPRC-203ENST00000409946 CLIP1P30622 1438 aa27.82■■■□□ 2.04
LRPPRC-203ENST00000409946 RANGAP1P46060 587 aaPredicted RBP27.81■■■□□ 2.04
LRPPRC-203ENST00000409946 PBRM1Q86U86 1689 aa27.79■■■□□ 2.04
LRPPRC-203ENST00000409946 IFT140Q96RY7 1462 aa27.76■■■□□ 2.03
LRPPRC-203ENST00000409946 AQRO60306 1485 aaKnown RBP eCLIP27.72■■■□□ 2.039e-8■■■■■ 30
LRPPRC-203ENST00000409946 ZNF608Q9ULD9 1512 aaPredicted RBP27.71■■■□□ 2.03
LRPPRC-203ENST00000409946 PPARGC1BQ86YN6 1023 aaKnown RBP27.64■■■□□ 2.02
LRPPRC-203ENST00000409946 PCGF6Q9BYE7 350 aa27.64■■■□□ 2.02
LRPPRC-203ENST00000409946 EIF4G3O43432 1585 aaKnown RBP27.63■■■□□ 2.01
LRPPRC-203ENST00000409946 CTTNBP2Q8WZ74 1663 aa27.62■■■□□ 2.01
LRPPRC-203ENST00000409946 ARAP1Q96P48 1450 aa27.59■■■□□ 2.01
LRPPRC-203ENST00000409946 GRIN2BQ13224 1484 aa27.58■■■□□ 2.01
LRPPRC-203ENST00000409946 ADAMTS12P58397 1594 aa27.58■■■□□ 2.01
LRPPRC-203ENST00000409946 VPS8Q8N3P4 1428 aa27.57■■■□□ 2
LRPPRC-203ENST00000409946 ARHGAP35Q9NRY4 1499 aa27.55■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms