RNA–Protein interactions for RNA: ENST00000628375.2

CHD2-215, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5 BASIC

Gene CHD2, Length 3,202 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-215ENST00000628375 NISCHQ9Y2I1 1504 aa13.45□□□□□ -0.26
CHD2-215ENST00000628375 DCAF8L2P0C7V8 631 aa12.47□□□□□ -0.41
CHD2-215ENST00000628375 ABCC9O60706 1549 aa12.05□□□□□ -0.48
CHD2-215ENST00000628375 CCDC180Q9P1Z9 1646 aa11.82□□□□□ -0.52
CHD2-215ENST00000628375 SHROOM4Q9ULL8 1493 aa11.7□□□□□ -0.54
CHD2-215ENST00000628375 PABPN1Q86U42 306 aaKnown RBP eCLIP11.64□□□□□ -0.55
CHD2-215ENST00000628375 ZCCHC6Q5VYS8 1495 aaKnown RBP11.26□□□□□ -0.61
CHD2-215ENST00000628375 SUPT5HO00267 1087 aaKnown RBP11.19□□□□□ -0.62
CHD2-215ENST00000628375 DNAJC5BQ9UF47 199 aa11.16□□□□□ -0.62
CHD2-215ENST00000628375 DCAF1Q9Y4B6 1507 aa11.15□□□□□ -0.62
CHD2-215ENST00000628375 SCRIBQ14160 1630 aa11.13□□□□□ -0.63
CHD2-215ENST00000628375 RB1CC1Q8TDY2 1594 aa11.04□□□□□ -0.64
CHD2-215ENST00000628375 MYO15BQ96JP2 1530 aa11.04□□□□□ -0.64
CHD2-215ENST00000628375 NACADO15069 1562 aa10.95□□□□□ -0.66
CHD2-215ENST00000628375 CECR2Q9BXF3 1484 aa10.81□□□□□ -0.68
CHD2-215ENST00000628375 UNC13AQ9UPW8 1703 aa10.73□□□□□ -0.69
CHD2-215ENST00000628375 EHMT2Q96KQ7 1210 aa10.72□□□□□ -0.69
CHD2-215ENST00000628375 BICRAQ9NZM4 1560 aa10.72□□□□□ -0.69
CHD2-215ENST00000628375 MROH2BQ7Z745 1585 aa10.56□□□□□ -0.72
CHD2-215ENST00000628375 EIF4G1Q04637 1599 aaKnown RBP10.53□□□□□ -0.72
CHD2-215ENST00000628375 CC2D2AQ9P2K1 1620 aa10.52□□□□□ -0.73
CHD2-215ENST00000628375 RSF1Q96T23 1441 aaPredicted RBP10.5□□□□□ -0.73
CHD2-215ENST00000628375 FAM9AQ8IZU1 332 aaPredicted RBP10.5□□□□□ -0.73
CHD2-215ENST00000628375 WIZO95785 1651 aa10.42□□□□□ -0.74
CHD2-215ENST00000628375 RANGAP1P46060 587 aaPredicted RBP10.42□□□□□ -0.74
CHD2-215ENST00000628375 BAZ1BQ9UIG0 1483 aaKnown RBP10.42□□□□□ -0.74
CHD2-215ENST00000628375 ATAD2BQ9ULI0 1458 aa10.42□□□□□ -0.74
CHD2-215ENST00000628375 NESP48681 1621 aa10.41□□□□□ -0.74
CHD2-215ENST00000628375 FBLN2P98095 1184 aa10.37□□□□□ -0.75
CHD2-215ENST00000628375 TTBK1Q5TCY1 1321 aaPredicted RBP10.36□□□□□ -0.75
CHD2-215ENST00000628375 BAZ1AQ9NRL2 1556 aaPredicted RBP10.35□□□□□ -0.75
CHD2-215ENST00000628375 SMARCA4P51532 1647 aa10.34□□□□□ -0.75
CHD2-215ENST00000628375 ERCC6Q03468 1493 aa10.33□□□□□ -0.76
CHD2-215ENST00000628375 TRIM41Q8WV44 630 aa10.27□□□□□ -0.77
CHD2-215ENST00000628375 PEG3Q9GZU2 1588 aa10.27□□□□□ -0.77
CHD2-215ENST00000628375 NCAPD3P42695 1498 aa10.26□□□□□ -0.77
CHD2-215ENST00000628375 CCDC88BA6NC98 1476 aa10.25□□□□□ -0.77
CHD2-215ENST00000628375 SMARCA2P51531 1590 aa10.22□□□□□ -0.77
CHD2-215ENST00000628375 CADPSQ9ULU8 1353 aa10.2□□□□□ -0.78
CHD2-215ENST00000628375 HRCP23327 699 aa10.18□□□□□ -0.78
CHD2-215ENST00000628375 TOP2AP11388 1531 aaKnown RBP10.16□□□□□ -0.78
CHD2-215ENST00000628375 TDRD9Q8NDG6 1382 aaKnown RBP10.12□□□□□ -0.79
CHD2-215ENST00000628375 CHIC1Q5VXU3 224 aa10.11□□□□□ -0.79
CHD2-215ENST00000628375 LOC105371045A0A1W2PR82 267 aa10.1□□□□□ -0.79
CHD2-215ENST00000628375 ARID3CA6NKF2 412 aa10.08□□□□□ -0.8
CHD2-215ENST00000628375 FANCD2Q9BXW9 1451 aa10.08□□□□□ -0.8
CHD2-215ENST00000628375 PDS5BQ9NTI5 1447 aa10.08□□□□□ -0.8
CHD2-215ENST00000628375 HMGXB3Q12766 1538 aa10.07□□□□□ -0.8
CHD2-215ENST00000628375 ABCC8Q09428 1581 aa10.07□□□□□ -0.8
CHD2-215ENST00000628375 P3H3Q8IVL6 736 aa10.05□□□□□ -0.8
CHD2-215ENST00000628375 ATP1B4Q9UN42 357 aaPredicted RBP10.05□□□□□ -0.8
CHD2-215ENST00000628375 PELP1Q8IZL8 1130 aaKnown RBP10.04□□□□□ -0.8
CHD2-215ENST00000628375 UBTFP17480 764 aaKnown RBP10.03□□□□□ -0.8
CHD2-215ENST00000628375 RAD54L2Q9Y4B4 1467 aa10.02□□□□□ -0.8
CHD2-215ENST00000628375 CHMP7Q8WUX9 453 aaPredicted RBP10.02□□□□□ -0.81
CHD2-215ENST00000628375 AQRO60306 1485 aaKnown RBP eCLIP10□□□□□ -0.818e-8■■■□□ 15.4
CHD2-215ENST00000628375 CEP164Q9UPV0 1460 aa10□□□□□ -0.81
CHD2-215ENST00000628375 CFTRP13569 1480 aa9.98□□□□□ -0.81
CHD2-215ENST00000628375 PPARGC1BQ86YN6 1023 aaKnown RBP9.97□□□□□ -0.81
CHD2-215ENST00000628375 PRDM2Q13029 1718 aa9.96□□□□□ -0.82
CHD2-215ENST00000628375 SOGA1O94964 1423 aa9.95□□□□□ -0.82
CHD2-215ENST00000628375 CYB5RLQ6IPT4 315 aa9.95□□□□□ -0.82
CHD2-215ENST00000628375 WRNQ14191 1432 aaPredicted RBP eCLIP9.94□□□□□ -0.82
CHD2-215ENST00000628375 ZNF608Q9ULD9 1512 aaPredicted RBP9.93□□□□□ -0.82
CHD2-215ENST00000628375 URB2Q14146 1524 aaKnown RBP9.91□□□□□ -0.82
CHD2-215ENST00000628375 RUSC2Q8N2Y8 1516 aa9.9□□□□□ -0.82
CHD2-215ENST00000628375 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.9□□□□□ -0.83
CHD2-215ENST00000628375 HNRNPUL2Q1KMD3 747 aaKnown RBP9.9□□□□□ -0.83
CHD2-215ENST00000628375 KIF21AQ7Z4S6 1674 aa9.89□□□□□ -0.83
CHD2-215ENST00000628375 OSCARQ8IYS5 282 aa9.88□□□□□ -0.83
CHD2-215ENST00000628375 CUX2O14529 1486 aa9.87□□□□□ -0.83
CHD2-215ENST00000628375 MRC2Q9UBG0 1479 aa9.86□□□□□ -0.83
CHD2-215ENST00000628375 FGD5Q6ZNL6 1462 aa9.86□□□□□ -0.83
CHD2-215ENST00000628375 LAMC3Q9Y6N6 1575 aa9.85□□□□□ -0.83
CHD2-215ENST00000628375 TOPBP1Q92547 1522 aa9.85□□□□□ -0.83
CHD2-215ENST00000628375 CSRNP3Q8WYN3 585 aa9.85□□□□□ -0.83
CHD2-215ENST00000628375 TRHP20396 242 aaPredicted RBP9.84□□□□□ -0.83
CHD2-215ENST00000628375 POLA1P09884 1462 aaPredicted RBP9.83□□□□□ -0.84
CHD2-215ENST00000628375 PCGF6Q9BYE7 350 aa9.82□□□□□ -0.84
CHD2-215ENST00000628375 CUX1P39880 1505 aa9.82□□□□□ -0.84
CHD2-215ENST00000628375 SYNJ1O43426 1573 aa9.77□□□□□ -0.84
CHD2-215ENST00000628375 BIVM-ERCC5R4GMW8 1640 aa9.77□□□□□ -0.85
CHD2-215ENST00000628375 KCNH8Q96L42 1107 aa9.75□□□□□ -0.85
CHD2-215ENST00000628375 DNAJC5Q9H3Z4 198 aa9.75□□□□□ -0.85
CHD2-215ENST00000628375 JPH4Q96JJ6 628 aa9.74□□□□□ -0.85
CHD2-215ENST00000628375 GAPVD1Q14C86 1478 aa9.73□□□□□ -0.85
CHD2-215ENST00000628375 CARMIL1Q5VZK9 1371 aa9.73□□□□□ -0.85
CHD2-215ENST00000628375 IGF1RP08069 1367 aa9.72□□□□□ -0.85
CHD2-215ENST00000628375 TOP2BQ02880 1626 aa9.72□□□□□ -0.85
CHD2-215ENST00000628375 MYT1Q01538 1121 aa9.71□□□□□ -0.85
CHD2-215ENST00000628375 KIF27Q86VH2 1401 aa9.7□□□□□ -0.86
CHD2-215ENST00000628375 SNAPC4Q5SXM2 1469 aa9.7□□□□□ -0.86
CHD2-215ENST00000628375 THOC2Q8NI27 1593 aaKnown RBP9.67□□□□□ -0.86
CHD2-215ENST00000628375 SCAF1Q9H7N4 1312 aaKnown RBP9.67□□□□□ -0.86
CHD2-215ENST00000628375 IFT140Q96RY7 1462 aa9.67□□□□□ -0.86
CHD2-215ENST00000628375 PLPPR3Q6T4P5 718 aa9.67□□□□□ -0.86
CHD2-215ENST00000628375 DNMBPQ6XZF7 1577 aa9.67□□□□□ -0.86
CHD2-215ENST00000628375 WDR62O43379 1518 aa9.64□□□□□ -0.87
CHD2-215ENST00000628375 NPM1P06748 294 aaKnown RBP eCLIP9.63□□□□□ -0.87
CHD2-215ENST00000628375 MYT1LQ9UL68 1186 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms