RNA–Protein interactions for RNA: ENST00000450296.5

ACAA1-209, Transcript of acetyl-CoA acyltransferase 1, humanhuman

TSL 5 BASIC

Gene ACAA1, Length 1,570 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACAA1-209ENST00000450296 NISCHQ9Y2I1 1504 aa46.6■■■■■ 5.05
ACAA1-209ENST00000450296 CCDC180Q9P1Z9 1646 aa41.47■■■■■ 4.23
ACAA1-209ENST00000450296 ABCC9O60706 1549 aa40.99■■■■■ 4.15
ACAA1-209ENST00000450296 RB1CC1Q8TDY2 1594 aa39.21■■■■□ 3.87
ACAA1-209ENST00000450296 DCAF8L2P0C7V8 631 aa39.21■■■■□ 3.87
ACAA1-209ENST00000450296 NACADO15069 1562 aa39.09■■■■□ 3.85
ACAA1-209ENST00000450296 ZCCHC6Q5VYS8 1495 aaKnown RBP38.75■■■■□ 3.79
ACAA1-209ENST00000450296 MYO15BQ96JP2 1530 aa38.71■■■■□ 3.79
ACAA1-209ENST00000450296 DCAF1Q9Y4B6 1507 aa38.48■■■■□ 3.75
ACAA1-209ENST00000450296 PABPN1Q86U42 306 aaKnown RBP eCLIP38.31■■■■□ 3.721e-7■□□□□ 9.6
ACAA1-209ENST00000450296 UNC13AQ9UPW8 1703 aa38.31■■■■□ 3.72
ACAA1-209ENST00000450296 BICRAQ9NZM4 1560 aa38.05■■■■□ 3.68
ACAA1-209ENST00000450296 SCRIBQ14160 1630 aa37.94■■■■□ 3.66
ACAA1-209ENST00000450296 DNAJC5BQ9UF47 199 aa37.9■■■■□ 3.66
ACAA1-209ENST00000450296 SHROOM4Q9ULL8 1493 aa37.54■■■■□ 3.6
ACAA1-209ENST00000450296 EIF4G1Q04637 1599 aaKnown RBP37.07■■■■□ 3.53
ACAA1-209ENST00000450296 CC2D2AQ9P2K1 1620 aa37■■■■□ 3.51
ACAA1-209ENST00000450296 CECR2Q9BXF3 1484 aa36.83■■■■□ 3.49
ACAA1-209ENST00000450296 SMARCA4P51532 1647 aa36.21■■■■□ 3.39
ACAA1-209ENST00000450296 BAZ1AQ9NRL2 1556 aaPredicted RBP36.12■■■■□ 3.37
ACAA1-209ENST00000450296 ATAD2BQ9ULI0 1458 aa36.1■■■■□ 3.37
ACAA1-209ENST00000450296 NCAPD3P42695 1498 aa36.09■■■■□ 3.37
ACAA1-209ENST00000450296 SMARCA2P51531 1590 aa36.01■■■■□ 3.36
ACAA1-209ENST00000450296 MROH2BQ7Z745 1585 aa35.94■■■■□ 3.34
ACAA1-209ENST00000450296 HMGXB3Q12766 1538 aa35.86■■■■□ 3.33
ACAA1-209ENST00000450296 PEG3Q9GZU2 1588 aa35.8■■■■□ 3.32
ACAA1-209ENST00000450296 BAZ1BQ9UIG0 1483 aaKnown RBP35.79■■■■□ 3.32
ACAA1-209ENST00000450296 WIZO95785 1651 aa35.54■■■■□ 3.28
ACAA1-209ENST00000450296 RSF1Q96T23 1441 aaPredicted RBP35.43■■■■□ 3.26
ACAA1-209ENST00000450296 NESP48681 1621 aa35.39■■■■□ 3.26
ACAA1-209ENST00000450296 ERCC6Q03468 1493 aa35.34■■■■□ 3.25
ACAA1-209ENST00000450296 LAMC3Q9Y6N6 1575 aa35.16■■■■□ 3.22
ACAA1-209ENST00000450296 TOP2AP11388 1531 aaKnown RBP35.11■■■■□ 3.21
ACAA1-209ENST00000450296 CADPSQ9ULU8 1353 aa35.06■■■■□ 3.2
ACAA1-209ENST00000450296 PDS5BQ9NTI5 1447 aa34.98■■■■□ 3.19
ACAA1-209ENST00000450296 CUX2O14529 1486 aa34.98■■■■□ 3.19
ACAA1-209ENST00000450296 KIF21AQ7Z4S6 1674 aa34.9■■■■□ 3.18
ACAA1-209ENST00000450296 THOC2Q8NI27 1593 aaKnown RBP34.82■■■■□ 3.17
ACAA1-209ENST00000450296 CFTRP13569 1480 aa34.77■■■■□ 3.16
ACAA1-209ENST00000450296 CCDC88BA6NC98 1476 aa34.75■■■■□ 3.15
ACAA1-209ENST00000450296 FANCD2Q9BXW9 1451 aa34.67■■■■□ 3.14
ACAA1-209ENST00000450296 MRC2Q9UBG0 1479 aa34.65■■■■□ 3.14
ACAA1-209ENST00000450296 CEP164Q9UPV0 1460 aa34.64■■■■□ 3.14
ACAA1-209ENST00000450296 WDR62O43379 1518 aa34.5■■■■□ 3.11
ACAA1-209ENST00000450296 SUPT5HO00267 1087 aaKnown RBP34.46■■■■□ 3.11
ACAA1-209ENST00000450296 PRDM2Q13029 1718 aa34.41■■■■□ 3.1
ACAA1-209ENST00000450296 URB2Q14146 1524 aaKnown RBP34.34■■■■□ 3.09
ACAA1-209ENST00000450296 DNAJC5Q9H3Z4 198 aa34.29■■■■□ 3.08
ACAA1-209ENST00000450296 TOPBP1Q92547 1522 aa34.07■■■■□ 3.04
ACAA1-209ENST00000450296 ABCC8Q09428 1581 aa34.01■■■■□ 3.03
ACAA1-209ENST00000450296 DNMBPQ6XZF7 1577 aa33.99■■■■□ 3.03
ACAA1-209ENST00000450296 IFT140Q96RY7 1462 aa33.92■■■■□ 3.02
ACAA1-209ENST00000450296 ZNF608Q9ULD9 1512 aaPredicted RBP33.83■■■■□ 3.01
ACAA1-209ENST00000450296 POLA1P09884 1462 aaPredicted RBP33.77■■■■□ 3
ACAA1-209ENST00000450296 CUX1P39880 1505 aa33.73■■■□□ 2.99
ACAA1-209ENST00000450296 TARBP1Q13395 1621 aaKnown RBP33.7■■■□□ 2.98
ACAA1-209ENST00000450296 RAD54L2Q9Y4B4 1467 aa33.68■■■□□ 2.98
ACAA1-209ENST00000450296 FGD5Q6ZNL6 1462 aa33.67■■■□□ 2.98
ACAA1-209ENST00000450296 SOGA1O94964 1423 aa33.66■■■□□ 2.98
ACAA1-209ENST00000450296 EIF4G3O43432 1585 aaKnown RBP33.63■■■□□ 2.97
ACAA1-209ENST00000450296 AQRO60306 1485 aaKnown RBP eCLIP33.62■■■□□ 2.978e-7■■■■□ 26.1
ACAA1-209ENST00000450296 OSCARQ8IYS5 282 aa33.56■■■□□ 2.96
ACAA1-209ENST00000450296 TDRD9Q8NDG6 1382 aaKnown RBP33.53■■■□□ 2.96
ACAA1-209ENST00000450296 WRNQ14191 1432 aaPredicted RBP eCLIP33.42■■■□□ 2.94
ACAA1-209ENST00000450296 SYNJ1O43426 1573 aa33.35■■■□□ 2.93
ACAA1-209ENST00000450296 WDR97A6NE52 1622 aa33.35■■■□□ 2.93
ACAA1-209ENST00000450296 FBLN2P98095 1184 aa33.34■■■□□ 2.93
ACAA1-209ENST00000450296 TOP2BQ02880 1626 aa33.33■■■□□ 2.93
ACAA1-209ENST00000450296 BIVM-ERCC5R4GMW8 1640 aa33.31■■■□□ 2.92
ACAA1-209ENST00000450296 ABCA10Q8WWZ4 1543 aa33.29■■■□□ 2.92
ACAA1-209ENST00000450296 SNAPC4Q5SXM2 1469 aa33.28■■■□□ 2.92
ACAA1-209ENST00000450296 GRIN2BQ13224 1484 aa33.27■■■□□ 2.92
ACAA1-209ENST00000450296 CHD1O14646 1710 aa33.26■■■□□ 2.92
ACAA1-209ENST00000450296 GAPVD1Q14C86 1478 aa33.24■■■□□ 2.91
ACAA1-209ENST00000450296 MAGI1Q96QZ7 1491 aaPredicted RBP33.18■■■□□ 2.9
ACAA1-209ENST00000450296 ABCA5Q8WWZ7 1642 aa33.17■■■□□ 2.9
ACAA1-209ENST00000450296 CHMP7Q8WUX9 453 aaPredicted RBP33.15■■■□□ 2.9
ACAA1-209ENST00000450296 PBRM1Q86U86 1689 aa33.15■■■□□ 2.9
ACAA1-209ENST00000450296 TRIM41Q8WV44 630 aa33.14■■■□□ 2.9
ACAA1-209ENST00000450296 SYNJ2O15056 1496 aa33.07■■■□□ 2.88
ACAA1-209ENST00000450296 RIMBP3CA6NJZ7 1639 aa33.02■■■□□ 2.88
ACAA1-209ENST00000450296 RIMBP3BA6NNM3 1639 aa33.02■■■□□ 2.88
ACAA1-209ENST00000450296 RIMBP3Q9UFD9 1639 aa33.02■■■□□ 2.88
ACAA1-209ENST00000450296 ARHGEF11O15085 1522 aa32.99■■■□□ 2.87
ACAA1-209ENST00000450296 CLASP1Q7Z460 1538 aa32.89■■■□□ 2.86
ACAA1-209ENST00000450296 ADAMTS12P58397 1594 aa32.88■■■□□ 2.85
ACAA1-209ENST00000450296 ERICH3Q5RHP9 1530 aa32.87■■■□□ 2.85
ACAA1-209ENST00000450296 FHAD1B1AJZ9 1412 aa32.84■■■□□ 2.85
ACAA1-209ENST00000450296 GRIN2AQ12879 1464 aa32.83■■■□□ 2.85
ACAA1-209ENST00000450296 CYB5RLQ6IPT4 315 aa32.78■■■□□ 2.84
ACAA1-209ENST00000450296 KIF27Q86VH2 1401 aa32.74■■■□□ 2.83
ACAA1-209ENST00000450296 ARAP1Q96P48 1450 aa32.71■■■□□ 2.83
ACAA1-209ENST00000450296 CEP170Q5SW79 1584 aa32.69■■■□□ 2.82
ACAA1-209ENST00000450296 NUP160Q12769 1436 aa32.68■■■□□ 2.82
ACAA1-209ENST00000450296 IGF1RP08069 1367 aa32.65■■■□□ 2.82
ACAA1-209ENST00000450296 CUL7Q14999 1698 aa32.51■■■□□ 2.8
ACAA1-209ENST00000450296 ERCC6L2Q5T890 1561 aa32.48■■■□□ 2.79
ACAA1-209ENST00000450296 CARMIL1Q5VZK9 1371 aa32.47■■■□□ 2.79
ACAA1-209ENST00000450296 SHROOM2Q13796 1616 aa32.44■■■□□ 2.78
ACAA1-209ENST00000450296 RUSC2Q8N2Y8 1516 aa32.42■■■□□ 2.78
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms