RNA–Protein interactions for RNA: ENST00000555412.1

SRSF5-210, Transcript of serine and arginine rich splicing factor 5, humanhuman

TSL 2

Gene SRSF5, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF5-210ENST00000555412 NISCHQ9Y2I1 1504 aa32.82■■■□□ 2.84
SRSF5-210ENST00000555412 CCDC180Q9P1Z9 1646 aa29.02■■■□□ 2.24
SRSF5-210ENST00000555412 ABCC9O60706 1549 aa28.01■■■□□ 2.07
SRSF5-210ENST00000555412 ZCCHC6Q5VYS8 1495 aaKnown RBP27.38■■□□□ 1.97
SRSF5-210ENST00000555412 DCAF8L2P0C7V8 631 aa27.28■■□□□ 1.96
SRSF5-210ENST00000555412 NACADO15069 1562 aa27.21■■□□□ 1.95
SRSF5-210ENST00000555412 DCAF1Q9Y4B6 1507 aa27.19■■□□□ 1.94
SRSF5-210ENST00000555412 MYO15BQ96JP2 1530 aa27.18■■□□□ 1.94
SRSF5-210ENST00000555412 RB1CC1Q8TDY2 1594 aa27.13■■□□□ 1.93
SRSF5-210ENST00000555412 UNC13AQ9UPW8 1703 aa26.53■■□□□ 1.84
SRSF5-210ENST00000555412 SCRIBQ14160 1630 aa26.46■■□□□ 1.83
SRSF5-210ENST00000555412 BICRAQ9NZM4 1560 aa26.29■■□□□ 1.8
SRSF5-210ENST00000555412 PABPN1Q86U42 306 aaKnown RBP eCLIP26.26■■□□□ 1.79
SRSF5-210ENST00000555412 SHROOM4Q9ULL8 1493 aa26.09■■□□□ 1.77
SRSF5-210ENST00000555412 EIF4G1Q04637 1599 aaKnown RBP25.56■■□□□ 1.68
SRSF5-210ENST00000555412 CECR2Q9BXF3 1484 aa25.51■■□□□ 1.67
SRSF5-210ENST00000555412 DNAJC5BQ9UF47 199 aa25.42■■□□□ 1.66
SRSF5-210ENST00000555412 BAZ1AQ9NRL2 1556 aaPredicted RBP25.4■■□□□ 1.66
SRSF5-210ENST00000555412 SMARCA4P51532 1647 aa25.37■■□□□ 1.65
SRSF5-210ENST00000555412 CC2D2AQ9P2K1 1620 aa25.37■■□□□ 1.65
SRSF5-210ENST00000555412 MROH2BQ7Z745 1585 aa25.28■■□□□ 1.64
SRSF5-210ENST00000555412 ATAD2BQ9ULI0 1458 aa25.15■■□□□ 1.62
SRSF5-210ENST00000555412 SMARCA2P51531 1590 aa25.14■■□□□ 1.62
SRSF5-210ENST00000555412 RSF1Q96T23 1441 aaPredicted RBP25.14■■□□□ 1.62
SRSF5-210ENST00000555412 PEG3Q9GZU2 1588 aa25.14■■□□□ 1.61
SRSF5-210ENST00000555412 NCAPD3P42695 1498 aa25.1■■□□□ 1.61
SRSF5-210ENST00000555412 WIZO95785 1651 aa25.03■■□□□ 1.6
SRSF5-210ENST00000555412 HMGXB3Q12766 1538 aa24.98■■□□□ 1.59
SRSF5-210ENST00000555412 BAZ1BQ9UIG0 1483 aaKnown RBP24.95■■□□□ 1.58
SRSF5-210ENST00000555412 TOP2AP11388 1531 aaKnown RBP24.77■■□□□ 1.56
SRSF5-210ENST00000555412 SUPT5HO00267 1087 aaKnown RBP24.77■■□□□ 1.56
SRSF5-210ENST00000555412 CCDC88BA6NC98 1476 aa24.51■■□□□ 1.51
SRSF5-210ENST00000555412 CADPSQ9ULU8 1353 aa24.39■■□□□ 1.49
SRSF5-210ENST00000555412 LAMC3Q9Y6N6 1575 aa24.37■■□□□ 1.49
SRSF5-210ENST00000555412 NESP48681 1621 aa24.34■■□□□ 1.49
SRSF5-210ENST00000555412 CFTRP13569 1480 aa24.31■■□□□ 1.48
SRSF5-210ENST00000555412 PDS5BQ9NTI5 1447 aa24.2■■□□□ 1.46
SRSF5-210ENST00000555412 PRDM2Q13029 1718 aa24.16■■□□□ 1.46
SRSF5-210ENST00000555412 ERCC6Q03468 1493 aa24.12■■□□□ 1.45
SRSF5-210ENST00000555412 FANCD2Q9BXW9 1451 aa24.08■■□□□ 1.45
SRSF5-210ENST00000555412 KIF21AQ7Z4S6 1674 aa24.08■■□□□ 1.44
SRSF5-210ENST00000555412 CEP164Q9UPV0 1460 aa24.01■■□□□ 1.43
SRSF5-210ENST00000555412 MRC2Q9UBG0 1479 aa23.9■■□□□ 1.42
SRSF5-210ENST00000555412 THOC2Q8NI27 1593 aaKnown RBP23.89■■□□□ 1.41
SRSF5-210ENST00000555412 WDR62O43379 1518 aa23.81■■□□□ 1.4
SRSF5-210ENST00000555412 URB2Q14146 1524 aaKnown RBP23.81■■□□□ 1.4
SRSF5-210ENST00000555412 ABCC8Q09428 1581 aa23.81■■□□□ 1.4
SRSF5-210ENST00000555412 CUX2O14529 1486 aa23.75■■□□□ 1.39
SRSF5-210ENST00000555412 TOPBP1Q92547 1522 aa23.74■■□□□ 1.39
SRSF5-210ENST00000555412 DNMBPQ6XZF7 1577 aa23.74■■□□□ 1.39
SRSF5-210ENST00000555412 CUX1P39880 1505 aa23.69■■□□□ 1.38
SRSF5-210ENST00000555412 WRNQ14191 1432 aaPredicted RBP eCLIP23.68■■□□□ 1.38
SRSF5-210ENST00000555412 TOP2BQ02880 1626 aa23.59■■□□□ 1.37
SRSF5-210ENST00000555412 BIVM-ERCC5R4GMW8 1640 aa23.59■■□□□ 1.37
SRSF5-210ENST00000555412 SYNJ1O43426 1573 aa23.58■■□□□ 1.37
SRSF5-210ENST00000555412 POLA1P09884 1462 aaPredicted RBP23.56■■□□□ 1.36
SRSF5-210ENST00000555412 FGD5Q6ZNL6 1462 aa23.55■■□□□ 1.36
SRSF5-210ENST00000555412 IFT140Q96RY7 1462 aa23.51■■□□□ 1.35
SRSF5-210ENST00000555412 SOGA1O94964 1423 aa23.5■■□□□ 1.35
SRSF5-210ENST00000555412 TARBP1Q13395 1621 aaKnown RBP23.46■■□□□ 1.35
SRSF5-210ENST00000555412 RAD54L2Q9Y4B4 1467 aa23.45■■□□□ 1.34
SRSF5-210ENST00000555412 TRIM41Q8WV44 630 aa23.41■■□□□ 1.34
SRSF5-210ENST00000555412 CHIC1Q5VXU3 224 aa23.37■■□□□ 1.33
SRSF5-210ENST00000555412 ABCA10Q8WWZ4 1543 aa23.36■■□□□ 1.33
SRSF5-210ENST00000555412 ZNF608Q9ULD9 1512 aaPredicted RBP23.35■■□□□ 1.33
SRSF5-210ENST00000555412 WDR97A6NE52 1622 aa23.33■■□□□ 1.33
SRSF5-210ENST00000555412 TDRD9Q8NDG6 1382 aaKnown RBP23.3■■□□□ 1.32
SRSF5-210ENST00000555412 AQRO60306 1485 aaKnown RBP eCLIP23.29■■□□□ 1.327e-15■■■■■ 58
SRSF5-210ENST00000555412 EIF4G3O43432 1585 aaKnown RBP23.26■■□□□ 1.31
SRSF5-210ENST00000555412 GAPVD1Q14C86 1478 aa23.22■■□□□ 1.31
SRSF5-210ENST00000555412 ABCA5Q8WWZ7 1642 aa23.21■■□□□ 1.31
SRSF5-210ENST00000555412 KIF27Q86VH2 1401 aa23.17■■□□□ 1.3
SRSF5-210ENST00000555412 GRIN2BQ13224 1484 aa23.17■■□□□ 1.3
SRSF5-210ENST00000555412 PBRM1Q86U86 1689 aa23.13■■□□□ 1.29
SRSF5-210ENST00000555412 ERICH3Q5RHP9 1530 aa23.09■■□□□ 1.29
SRSF5-210ENST00000555412 MAGI1Q96QZ7 1491 aaPredicted RBP23.06■■□□□ 1.28
SRSF5-210ENST00000555412 IGF1RP08069 1367 aa23.06■■□□□ 1.28
SRSF5-210ENST00000555412 RUSC2Q8N2Y8 1516 aa23.06■■□□□ 1.28
SRSF5-210ENST00000555412 SNAPC4Q5SXM2 1469 aa23.05■■□□□ 1.28
SRSF5-210ENST00000555412 EEA1Q15075 1411 aa22.99■■□□□ 1.27
SRSF5-210ENST00000555412 FHAD1B1AJZ9 1412 aa22.97■■□□□ 1.27
SRSF5-210ENST00000555412 SYNJ2O15056 1496 aa22.97■■□□□ 1.27
SRSF5-210ENST00000555412 CHMP7Q8WUX9 453 aaPredicted RBP22.96■■□□□ 1.27
SRSF5-210ENST00000555412 ADAMTS12P58397 1594 aa22.95■■□□□ 1.26
SRSF5-210ENST00000555412 CUL7Q14999 1698 aa22.94■■□□□ 1.26
SRSF5-210ENST00000555412 FBLN2P98095 1184 aa22.94■■□□□ 1.26
SRSF5-210ENST00000555412 CSRNP3Q8WYN3 585 aa22.93■■□□□ 1.26
SRSF5-210ENST00000555412 CARMIL1Q5VZK9 1371 aa22.92■■□□□ 1.26
SRSF5-210ENST00000555412 CHD1O14646 1710 aa22.92■■□□□ 1.26
SRSF5-210ENST00000555412 OSCARQ8IYS5 282 aa22.88■■□□□ 1.25
SRSF5-210ENST00000555412 FAM9AQ8IZU1 332 aaPredicted RBP22.88■■□□□ 1.25
SRSF5-210ENST00000555412 GRIN2AQ12879 1464 aa22.85■■□□□ 1.25
SRSF5-210ENST00000555412 PRXQ9BXM0 1461 aa22.82■■□□□ 1.24
SRSF5-210ENST00000555412 RAPGEF2Q9Y4G8 1499 aa22.81■■□□□ 1.24
SRSF5-210ENST00000555412 NUP160Q12769 1436 aa22.74■■□□□ 1.23
SRSF5-210ENST00000555412 CEP170Q5SW79 1584 aa22.72■■□□□ 1.23
SRSF5-210ENST00000555412 KIF21BO75037 1637 aa22.69■■□□□ 1.22
SRSF5-210ENST00000555412 CLASP1Q7Z460 1538 aa22.67■■□□□ 1.22
SRSF5-210ENST00000555412 KIAA0586Q9BVV6 1533 aa22.64■■□□□ 1.21
SRSF5-210ENST00000555412 DNAJC5Q9H3Z4 198 aa22.64■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms