Protein–RNA interactions for Protein: P53999

SUB1, Activated RNA polymerase II transcriptional coactivator p15, humanhuman

Known RBP eCLIP

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1P53999 GNAI2-210ENST00000490122 2445 ntTSL 211.33□□□□□ -0.61e-9■■□□□ 14.2
SUB1P53999 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC11.24□□□□□ -0.611e-9■■□□□ 14.2
SUB1P53999 MSH5-202ENST00000375740 2669 ntTSL 1 (best) BASIC11.2□□□□□ -0.622e-7■■□□□ 14.2
SUB1P53999 GNAI2-203ENST00000422163 2407 ntTSL 2 BASIC11.14□□□□□ -0.631e-9■■□□□ 14.2
SUB1P53999 HINT3-201ENST00000229633 3314 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.652e-7■■□□□ 14.2
SUB1P53999 MSH5-208ENST00000429846 616 ntTSL 310.92□□□□□ -0.662e-7■■□□□ 14.2
SUB1P53999 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC10.89□□□□□ -0.671e-9■■□□□ 14.2
SUB1P53999 SEPT9-201ENST00000329047 4453 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.682e-7■■□□□ 14.2
SUB1P53999 SEPT9-203ENST00000427177 3821 ntAPPRIS P4 TSL 1 (best) BASIC10.65□□□□□ -0.72e-7■■□□□ 14.2
SUB1P53999 SEPT9-207ENST00000449803 3996 ntTSL 2 BASIC10.62□□□□□ -0.712e-7■■□□□ 14.2
SUB1P53999 MSH5-204ENST00000375755 3094 ntAPPRIS P3 TSL 1 (best) BASIC10.2□□□□□ -0.782e-7■■□□□ 14.2
SUB1P53999 SEPT9-204ENST00000427180 3635 ntTSL 2 BASIC9.92□□□□□ -0.822e-7■■□□□ 14.2
SUB1P53999 SEPT9-205ENST00000427674 3937 ntTSL 1 (best) BASIC9.85□□□□□ -0.832e-7■■□□□ 14.2
SUB1P53999 SEPT9-206ENST00000431235 4004 ntTSL 5 BASIC9.66□□□□□ -0.862e-7■■□□□ 14.2
SUB1P53999 HIST1H1E-201ENST00000304218 754 ntAPPRIS P1 BASIC9.38□□□□□ -0.912e-7■■□□□ 14.2
SUB1P53999 FLNB-212ENST00000490882 8079 ntAPPRIS ALT2 TSL 1 (best) BASIC9.31□□□□□ -0.922e-7■■□□□ 14.2
SUB1P53999 MSH5-216ENST00000484309 857 ntTSL 59.2□□□□□ -0.942e-7■■□□□ 14.2
SUB1P53999 FLNB-214ENST00000493452 7402 ntTSL 1 (best) BASIC9.17□□□□□ -0.942e-7■■□□□ 14.2
SUB1P53999 ADD1-210ENST00000503455 3206 ntTSL 5 BASIC9.08□□□□□ -0.962e-7■■□□□ 14.2
SUB1P53999 PPM1F-205ENST00000445205 650 ntTSL 58.95□□□□□ -0.982e-7■■□□□ 14.2
SUB1P53999 MSH5-SAPCD1-207ENST00000493662 3991 ntAPPRIS P5 TSL 1 (best) BASIC8.79□□□□□ -12e-7■■□□□ 14.2
SUB1P53999 ADD1-217ENST00000513328 3107 ntTSL 5 BASIC8.3□□□□□ -1.082e-7■■□□□ 14.2
SUB1P53999 MSH5-211ENST00000463144 2296 ntTSL 58.13□□□□□ -1.112e-7■■□□□ 14.2
SUB1P53999 ADD1-216ENST00000511797 671 ntTSL 57.72□□□□□ -1.172e-7■■□□□ 14.2
SUB1P53999 ADD1-214ENST00000509039 1569 ntTSL 27.69□□□□□ -1.182e-7■■□□□ 14.2
SUB1P53999 GNAI2-211ENST00000491100 3886 ntTSL 27.46□□□□□ -1.221e-9■■□□□ 14.2
SUB1P53999 DLG5-205ENST00000466198 667 ntTSL 27.44□□□□□ -1.222e-7■■□□□ 14.2
SUB1P53999 PPM1F-210ENST00000623652 3157 ntTSL 57.22□□□□□ -1.252e-7■■□□□ 14.2
SUB1P53999 AL356299.2-201ENST00000609218 586 ntTSL 4 BASIC7.13□□□□□ -1.272e-7■■□□□ 14.2
SUB1P53999 ADD1-212ENST00000508277 491 ntTSL 56.73□□□□□ -1.332e-7■■□□□ 14.2
SUB1P53999 MSH5-205ENST00000395853 2704 ntTSL 2 BASIC6.62□□□□□ -1.352e-7■■□□□ 14.2
SUB1P53999 ADD1-209ENST00000503169 2394 ntTSL 26.32□□□□□ -1.42e-7■■□□□ 14.2
SUB1P53999 ADD1-220ENST00000534870 795 ntTSL 23.02□□□□□ -1.932e-7■■□□□ 14.2
SUB1P53999 KPNB1-202ENST00000535458 3163 ntTSL 2 BASIC7.12□□□□□ -1.276e-10■■□□□ 14.2
SUB1P53999 KPNB1-203ENST00000540627 2989 ntTSL 2 BASIC5.87□□□□□ -1.476e-10■■□□□ 14.2
SUB1P53999 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.468e-12■■□□□ 14.2
SUB1P53999 ATP1B3-204ENST00000466678 1708 ntTSL 311.15□□□□□ -0.634e-13■■□□□ 14.2
SUB1P53999 ATP1B3-201ENST00000286371 1811 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.664e-13■■□□□ 14.2
SUB1P53999 ATP1B3-202ENST00000462082 837 ntTSL 3 BASIC6.27□□□□□ -1.414e-13■■□□□ 14.2
SUB1P53999 ATP1B3-203ENST00000465172 1951 ntTSL 25.44□□□□□ -1.544e-13■■□□□ 14.2
SUB1P53999 NCOA4-204ENST00000581486 3549 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.397e-10■■□□□ 14.2
SUB1P53999 B2M-210ENST00000560681 572 ntTSL 410.02□□□□□ -0.812e-9■■□□□ 14.2
SUB1P53999 B2M-208ENST00000559916 1081 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.142e-9■■□□□ 14.2
SUB1P53999 B2M-209ENST00000560556 472 ntTSL 33.33□□□□□ -1.882e-9■■□□□ 14.2
SUB1P53999 RIPOR3-202ENST00000327979 4377 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.514e-6■■□□□ 14.2
SUB1P53999 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.271e-8■■□□□ 14.2
SUB1P53999 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.381e-8■■□□□ 14.2
SUB1P53999 HNRNPF-202ENST00000356053 2670 ntAPPRIS P1 TSL 2 BASIC10.3□□□□□ -0.761e-8■■□□□ 14.2
SUB1P53999 HNRNPF-207ENST00000544000 2676 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.761e-8■■□□□ 14.2
SUB1P53999 SEC61A1-201ENST00000243253 3635 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.91e-8■■□□□ 14.2
SUB1P53999 SEC61A1-205ENST00000483956 3046 ntTSL 1 (best)9.15□□□□□ -0.941e-8■■□□□ 14.2
SUB1P53999 SEC61A1-202ENST00000424880 3238 ntTSL 2 BASIC8.86□□□□□ -0.991e-8■■□□□ 14.2
SUB1P53999 HNRNPF-203ENST00000357065 2617 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.021e-8■■□□□ 14.2
SUB1P53999 ACACA-237ENST00000616317 9961 ntTSL 1 (best) BASIC11.86□□□□□ -0.514e-8■■□□□ 14.2
SUB1P53999 ACACA-231ENST00000614428 9554 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.484e-8■■□□□ 14.2
SUB1P53999 ABO-201ENST00000453660 6341 ntTSL 1 (best)11.99□□□□□ -0.497e-7■■□□□ 14.2
SUB1P53999 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC18.71■□□□□ 0.597e-7■■□□□ 14.2
SUB1P53999 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.597e-7■■□□□ 14.2
SUB1P53999 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC22.4■■□□□ 1.182e-7■■□□□ 14.2
SUB1P53999 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.22e-7■■□□□ 14.2
SUB1P53999 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC18.49■□□□□ 0.553e-6■■□□□ 14.2
SUB1P53999 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.063e-6■■□□□ 14.2
SUB1P53999 RPL27A-210ENST00000531978 867 ntTSL 2 BASIC5.15□□□□□ -1.594e-58■■□□□ 14.2
SUB1P53999 NOC2L-202ENST00000469563 878 ntTSL 214.44□□□□□ -0.12e-7■■□□□ 14.2
SUB1P53999 NOC2L-205ENST00000487214 865 ntTSL 314.32□□□□□ -0.122e-7■■□□□ 14.2
SUB1P53999 VAT1-204ENST00000587147 582 ntTSL 212.96□□□□□ -0.333e-33■■□□□ 14.2
SUB1P53999 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC11.59□□□□□ -0.558e-15■■□□□ 14.2
SUB1P53999 TRAPPC3-205ENST00000462715 2428 ntTSL 29.01□□□□□ -0.972e-7■■□□□ 14.2
SUB1P53999 ACLY-203ENST00000393896 3682 ntAPPRIS ALT1 TSL 2 BASIC8.89□□□□□ -0.992e-7■■□□□ 14.2
SUB1P53999 HIST1H2BC-202ENST00000396984 571 ntAPPRIS P1 BASIC8.74□□□□□ -1.011e-9■■□□□ 14.2
SUB1P53999 MRPL42-210ENST00000552938 999 ntTSL 28.21□□□□□ -1.12e-7■■□□□ 14.2
SUB1P53999 HIST1H2BC-201ENST00000314332 659 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.161e-9■■□□□ 14.2
SUB1P53999 MKRN1-205ENST00000468447 583 ntTSL 1 (best)7.35□□□□□ -1.232e-7■■□□□ 14.2
SUB1P53999 GSPT1-201ENST00000420576 1603 ntAPPRIS ALT2 TSL 1 (best) BASIC6.97□□□□□ -1.292e-12■■□□□ 14.2
SUB1P53999 TFRC-210ENST00000465288 560 ntTSL 56.64□□□□□ -1.358e-7■■□□□ 14.2
SUB1P53999 PJA2-201ENST00000361189 4889 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.512e-12■■□□□ 14.2
SUB1P53999 PRKDC-209ENST00000540819 537 ntTSL 34.34□□□□□ -1.712e-7■■□□□ 14.2
SUB1P53999 TFRC-212ENST00000477148 570 ntTSL 44.01□□□□□ -1.778e-7■■□□□ 14.2
SUB1P53999 TFRC-211ENST00000475593 875 ntTSL 33.87□□□□□ -1.798e-7■■□□□ 14.2
SUB1P53999 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC3.84□□□□□ -1.792e-12■■□□□ 14.2
SUB1P53999 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC3.66□□□□□ -1.822e-7■■□□□ 14.2
SUB1P53999 RPN2-206ENST00000456400 453 ntTSL 33.47□□□□□ -1.854e-17■■□□□ 14.2
SUB1P53999 MRPL42-201ENST00000358678 2105 ntTSL 1 (best)2.88□□□□□ -1.952e-7■■□□□ 14.2
SUB1P53999 MRPL42-205ENST00000549561 775 ntTSL 32.1□□□□□ -2.072e-7■■□□□ 14.2
SUB1P53999 VAPA-206ENST00000583475 939 ntTSL 21.72□□□□□ -2.138e-15■■□□□ 14.2
SUB1P53999 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.28□□□□□ -2.22e-7■■□□□ 14.2
SUB1P53999 PABPC4-205ENST00000421687 1663 ntTSL 510.97□□□□□ -0.652e-6■■□□□ 14.1
SUB1P53999 HIST1H3B-201ENST00000621411 411 ntAPPRIS P1 BASIC9.36□□□□□ -0.915e-21■■□□□ 14.1
SUB1P53999 EIF4A1-218ENST00000581544 1444 ntTSL 28.98□□□□□ -0.972e-6■■□□□ 14.1
SUB1P53999 EIF4A1-202ENST00000396527 1169 ntTSL 26.27□□□□□ -1.412e-6■■□□□ 14.1
SUB1P53999 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.393e-8■■□□□ 14.1
SUB1P53999 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC11.85□□□□□ -0.515e-8■■□□□ 14.1
SUB1P53999 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.515e-8■■□□□ 14.1
SUB1P53999 CNN2-206ENST00000564572 2266 nt11.6□□□□□ -0.555e-8■■□□□ 14.1
SUB1P53999 CNN2-202ENST00000348419 2033 ntTSL 2 BASIC11.25□□□□□ -0.615e-8■■□□□ 14.1
SUB1P53999 CNN2-207ENST00000565096 2109 ntTSL 2 BASIC9.43□□□□□ -0.95e-8■■□□□ 14.1
SUB1P53999 GANAB-202ENST00000356638 3608 ntAPPRIS P3 TSL 1 (best) BASIC7.73□□□□□ -1.175e-7■■□□□ 14.1
SUB1P53999 MACF1-207ENST00000442046 2299 ntTSL 510.86□□□□□ -0.679e-7■■□□□ 14.1
SUB1P53999 MACF1-202ENST00000360115 2824 ntTSL 510.78□□□□□ -0.689e-7■■□□□ 14.1
SUB1P53999 MACF1-208ENST00000446276 2559 ntTSL 59.24□□□□□ -0.939e-7■■□□□ 14.1
Retrieved 100 of 11,644 protein–RNA pairs in 144.5 ms