RNA–Protein interactions for RNA: ENST00000614428.4

ACACA-231, Transcript of acetyl-CoA carboxylase alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ACACA, Length 9,554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACACA-231ENST00000614428 NISCHQ9Y2I1 1504 aa12.62□□□□□ -0.39
ACACA-231ENST00000614428 CCDC180Q9P1Z9 1646 aa11.11□□□□□ -0.63
ACACA-231ENST00000614428 SUPT5HO00267 1087 aaKnown RBP10.75□□□□□ -0.69
ACACA-231ENST00000614428 SHROOM4Q9ULL8 1493 aa10.72□□□□□ -0.69
ACACA-231ENST00000614428 DCAF8L2P0C7V8 631 aa10.69□□□□□ -0.7
ACACA-231ENST00000614428 ZCCHC6Q5VYS8 1495 aaKnown RBP10.66□□□□□ -0.7
ACACA-231ENST00000614428 ZEB1P37275 1124 aaPredicted RBP10.58□□□□□ -0.72
ACACA-231ENST00000614428 DCAF1Q9Y4B6 1507 aa10.51□□□□□ -0.73
ACACA-231ENST00000614428 PELP1Q8IZL8 1130 aaKnown RBP10.49□□□□□ -0.73
ACACA-231ENST00000614428 HRCP23327 699 aa10.36□□□□□ -0.75
ACACA-231ENST00000614428 PCGF6Q9BYE7 350 aa10.34□□□□□ -0.75
ACACA-231ENST00000614428 MYT1Q01538 1121 aa10.31□□□□□ -0.76
ACACA-231ENST00000614428 CHIC1Q5VXU3 224 aa10.29□□□□□ -0.76
ACACA-231ENST00000614428 TRIM26Q12899 539 aaPredicted RBP10.29□□□□□ -0.76
ACACA-231ENST00000614428 MYO15BQ96JP2 1530 aa10.26□□□□□ -0.77
ACACA-231ENST00000614428 TRIM41Q8WV44 630 aa10.23□□□□□ -0.77
ACACA-231ENST00000614428 ABCC9O60706 1549 aa10.23□□□□□ -0.77
ACACA-231ENST00000614428 CENPBP07199 599 aaPredicted RBP10.18□□□□□ -0.78
ACACA-231ENST00000614428 NACADO15069 1562 aa10.18□□□□□ -0.78
ACACA-231ENST00000614428 SCRIBQ14160 1630 aa10.12□□□□□ -0.79
ACACA-231ENST00000614428 APLP2Q06481 763 aa10.12□□□□□ -0.79
ACACA-231ENST00000614428 RB1CC1Q8TDY2 1594 aa10.1□□□□□ -0.79
ACACA-231ENST00000614428 CCER1Q8TC90 406 aaPredicted RBP9.99□□□□□ -0.81
ACACA-231ENST00000614428 BAZ1AQ9NRL2 1556 aaPredicted RBP9.95□□□□□ -0.82
ACACA-231ENST00000614428 EEA1Q15075 1411 aa9.94□□□□□ -0.82
ACACA-231ENST00000614428 FAM9AQ8IZU1 332 aaPredicted RBP9.89□□□□□ -0.83
ACACA-231ENST00000614428 CLSPNQ9HAW4 1339 aa9.89□□□□□ -0.83
ACACA-231ENST00000614428 RSF1Q96T23 1441 aaPredicted RBP9.87□□□□□ -0.83
ACACA-231ENST00000614428 UBTFP17480 764 aaKnown RBP9.85□□□□□ -0.83
ACACA-231ENST00000614428 LOC105371045A0A1W2PR82 267 aa9.84□□□□□ -0.83
ACACA-231ENST00000614428 TOP2AP11388 1531 aaKnown RBP9.75□□□□□ -0.85
ACACA-231ENST00000614428 DIEXFQ68CQ4 756 aaKnown RBP9.73□□□□□ -0.85
ACACA-231ENST00000614428 SMARCA4P51532 1647 aa9.73□□□□□ -0.85
ACACA-231ENST00000614428 WIZO95785 1651 aa9.71□□□□□ -0.85
ACACA-231ENST00000614428 GOLGA3Q08378 1498 aa9.7□□□□□ -0.86
ACACA-231ENST00000614428 EHMT2Q96KQ7 1210 aa9.7□□□□□ -0.86
ACACA-231ENST00000614428 PPARGC1BQ86YN6 1023 aaKnown RBP9.68□□□□□ -0.86
ACACA-231ENST00000614428 SMARCA2P51531 1590 aa9.67□□□□□ -0.86
ACACA-231ENST00000614428 UNC13AQ9UPW8 1703 aa9.67□□□□□ -0.86
ACACA-231ENST00000614428 CEP164Q9UPV0 1460 aa9.67□□□□□ -0.86
ACACA-231ENST00000614428 NEFLP07196 543 aa9.67□□□□□ -0.86
ACACA-231ENST00000614428 WRNQ14191 1432 aaPredicted RBP eCLIP9.64□□□□□ -0.87
ACACA-231ENST00000614428 TNIKQ9UKE5 1360 aa9.64□□□□□ -0.87
ACACA-231ENST00000614428 CEP162Q5TB80 1403 aa9.63□□□□□ -0.87
ACACA-231ENST00000614428 MROH2BQ7Z745 1585 aa9.61□□□□□ -0.87
ACACA-231ENST00000614428 BAZ1BQ9UIG0 1483 aaKnown RBP9.61□□□□□ -0.87
ACACA-231ENST00000614428 ACIN1Q9UKV3 1341 aaKnown RBP9.61□□□□□ -0.87
ACACA-231ENST00000614428 CSRNP3Q8WYN3 585 aa9.6□□□□□ -0.87
ACACA-231ENST00000614428 ZNF316A6NFI3 1004 aaPredicted RBP9.6□□□□□ -0.87
ACACA-231ENST00000614428 KIF21BO75037 1637 aa9.58□□□□□ -0.88
ACACA-231ENST00000614428 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.58□□□□□ -0.88
ACACA-231ENST00000614428 CLIP1P30622 1438 aa9.58□□□□□ -0.88
ACACA-231ENST00000614428 PRDM2Q13029 1718 aa9.56□□□□□ -0.88
ACACA-231ENST00000614428 TTBK1Q5TCY1 1321 aaPredicted RBP9.55□□□□□ -0.88
ACACA-231ENST00000614428 CECR2Q9BXF3 1484 aa9.52□□□□□ -0.89
ACACA-231ENST00000614428 CCDC88BA6NC98 1476 aa9.49□□□□□ -0.89
ACACA-231ENST00000614428 VPS8Q8N3P4 1428 aa9.48□□□□□ -0.89
ACACA-231ENST00000614428 YTHDC1Q96MU7 727 aaKnown RBP9.47□□□□□ -0.89
ACACA-231ENST00000614428 ABCC8Q09428 1581 aa9.47□□□□□ -0.89
ACACA-231ENST00000614428 GTF3C3Q9Y5Q9 886 aa9.47□□□□□ -0.89
ACACA-231ENST00000614428 PEG3Q9GZU2 1588 aa9.46□□□□□ -0.89
ACACA-231ENST00000614428 ERICH3Q5RHP9 1530 aa9.46□□□□□ -0.89
ACACA-231ENST00000614428 KIF27Q86VH2 1401 aa9.45□□□□□ -0.9
ACACA-231ENST00000614428 ERICH6Q7L0X2 663 aa9.45□□□□□ -0.9
ACACA-231ENST00000614428 HNRNPUL2Q1KMD3 747 aaKnown RBP9.44□□□□□ -0.9
ACACA-231ENST00000614428 FHAD1B1AJZ9 1412 aa9.42□□□□□ -0.9
ACACA-231ENST00000614428 EIF4G1Q04637 1599 aaKnown RBP9.4□□□□□ -0.91
ACACA-231ENST00000614428 TOP2BQ02880 1626 aa9.39□□□□□ -0.91
ACACA-231ENST00000614428 MYT1LQ9UL68 1186 aa9.39□□□□□ -0.91
ACACA-231ENST00000614428 SCAF1Q9H7N4 1312 aaKnown RBP9.37□□□□□ -0.91
ACACA-231ENST00000614428 RANGAP1P46060 587 aaPredicted RBP9.36□□□□□ -0.91
ACACA-231ENST00000614428 HMGXB3Q12766 1538 aa9.35□□□□□ -0.91
ACACA-231ENST00000614428 BIVM-ERCC5R4GMW8 1640 aa9.34□□□□□ -0.91
ACACA-231ENST00000614428 TIMELESSQ9UNS1 1208 aa9.34□□□□□ -0.91
ACACA-231ENST00000614428 ANP32CO43423 234 aa9.33□□□□□ -0.92
ACACA-231ENST00000614428 SOGA1O94964 1423 aa9.31□□□□□ -0.92
ACACA-231ENST00000614428 NEUROD1Q13562 356 aa9.3□□□□□ -0.92
ACACA-231ENST00000614428 CCNB3Q8WWL7 1395 aa9.29□□□□□ -0.92
ACACA-231ENST00000614428 ATP1B4Q9UN42 357 aaPredicted RBP9.28□□□□□ -0.92
ACACA-231ENST00000614428 SYNJ1O43426 1573 aa9.28□□□□□ -0.92
ACACA-231ENST00000614428 KIF21AQ7Z4S6 1674 aa9.28□□□□□ -0.92
ACACA-231ENST00000614428 TONSLQ96HA7 1378 aa9.27□□□□□ -0.93
ACACA-231ENST00000614428 PABPN1Q86U42 306 aaKnown RBP eCLIP9.26□□□□□ -0.934e-6■□□□□ 10.2
ACACA-231ENST00000614428 ATAD2BQ9ULI0 1458 aa9.26□□□□□ -0.93
ACACA-231ENST00000614428 CUX1P39880 1505 aa9.24□□□□□ -0.93
ACACA-231ENST00000614428 CUL7Q14999 1698 aa9.24□□□□□ -0.93
ACACA-231ENST00000614428 FAM50AQ14320 339 aaKnown RBP9.24□□□□□ -0.93
ACACA-231ENST00000614428 ARHGAP35Q9NRY4 1499 aa9.24□□□□□ -0.93
ACACA-231ENST00000614428 MAP3K1Q13233 1512 aa9.23□□□□□ -0.93
ACACA-231ENST00000614428 FMN1Q68DA7 1419 aa9.23□□□□□ -0.93
ACACA-231ENST00000614428 EFCAB5A4FU69 1503 aa9.23□□□□□ -0.93
ACACA-231ENST00000614428 CTTNBP2Q8WZ74 1663 aa9.22□□□□□ -0.93
ACACA-231ENST00000614428 RAPGEF2Q9Y4G8 1499 aa9.22□□□□□ -0.93
ACACA-231ENST00000614428 ITGAEP38570 1179 aa9.21□□□□□ -0.93
ACACA-231ENST00000614428 CDK11AQ9UQ88 783 aaPredicted RBP9.21□□□□□ -0.94
ACACA-231ENST00000614428 CC2D2AQ9P2K1 1620 aa9.2□□□□□ -0.94
ACACA-231ENST00000614428 SUPT6HQ7KZ85 1726 aaKnown RBP9.19□□□□□ -0.94
ACACA-231ENST00000614428 CFAP43Q8NDM7 1665 aa9.19□□□□□ -0.94
ACACA-231ENST00000614428 SETD5Q9C0A6 1442 aa9.18□□□□□ -0.94
ACACA-231ENST00000614428 MTUS2Q5JR59 1369 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 175 ms