RNA–Protein interactions for RNA: ENST00000360115.8

MACF1-202, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 5

Gene MACF1, Length 2,824 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-202ENST00000360115 NISCHQ9Y2I1 1504 aa26.69■■□□□ 1.86
MACF1-202ENST00000360115 SHROOM4Q9ULL8 1493 aa22.89■■□□□ 1.25
MACF1-202ENST00000360115 ZCCHC6Q5VYS8 1495 aaKnown RBP22.7■■□□□ 1.22
MACF1-202ENST00000360115 SUPT5HO00267 1087 aaKnown RBP22.63■■□□□ 1.21
MACF1-202ENST00000360115 CCDC180Q9P1Z9 1646 aa22.58■■□□□ 1.21
MACF1-202ENST00000360115 HRCP23327 699 aa22.38■■□□□ 1.17
MACF1-202ENST00000360115 MYO15BQ96JP2 1530 aa22.37■■□□□ 1.17
MACF1-202ENST00000360115 CHIC1Q5VXU3 224 aa22.31■■□□□ 1.16
MACF1-202ENST00000360115 DCAF1Q9Y4B6 1507 aa21.98■■□□□ 1.11
MACF1-202ENST00000360115 PCGF6Q9BYE7 350 aa21.98■■□□□ 1.11
MACF1-202ENST00000360115 DCAF8L2P0C7V8 631 aa21.76■■□□□ 1.07
MACF1-202ENST00000360115 PPARGC1BQ86YN6 1023 aaKnown RBP21.73■■□□□ 1.07
MACF1-202ENST00000360115 LOC105371045A0A1W2PR82 267 aa21.58■■□□□ 1.04
MACF1-202ENST00000360115 TRIM26Q12899 539 aaPredicted RBP21.55■■□□□ 1.04
MACF1-202ENST00000360115 ABCC9O60706 1549 aa21.52■■□□□ 1.04
MACF1-202ENST00000360115 ZEB1P37275 1124 aaPredicted RBP21.33■■□□□ 1
MACF1-202ENST00000360115 RSF1Q96T23 1441 aaPredicted RBP21.26■□□□□ 0.99
MACF1-202ENST00000360115 RB1CC1Q8TDY2 1594 aa21.15■□□□□ 0.98
MACF1-202ENST00000360115 SCRIBQ14160 1630 aa21.12■□□□□ 0.97
MACF1-202ENST00000360115 TRIM41Q8WV44 630 aa21.1■□□□□ 0.97
MACF1-202ENST00000360115 PELP1Q8IZL8 1130 aaKnown RBP21.06■□□□□ 0.96
MACF1-202ENST00000360115 FAM9AQ8IZU1 332 aaPredicted RBP20.87■□□□□ 0.93
MACF1-202ENST00000360115 SCAF1Q9H7N4 1312 aaKnown RBP20.85■□□□□ 0.93
MACF1-202ENST00000360115 MROH2BQ7Z745 1585 aa20.74■□□□□ 0.91
MACF1-202ENST00000360115 NACADO15069 1562 aa20.73■□□□□ 0.91
MACF1-202ENST00000360115 CECR2Q9BXF3 1484 aa20.73■□□□□ 0.91
MACF1-202ENST00000360115 EIF4G1Q04637 1599 aaKnown RBP20.68■□□□□ 0.9
MACF1-202ENST00000360115 WIZO95785 1651 aa20.66■□□□□ 0.9
MACF1-202ENST00000360115 BAZ1AQ9NRL2 1556 aaPredicted RBP20.64■□□□□ 0.9
MACF1-202ENST00000360115 EHMT2Q96KQ7 1210 aa20.61■□□□□ 0.89
MACF1-202ENST00000360115 ACIN1Q9UKV3 1341 aaKnown RBP20.54■□□□□ 0.88
MACF1-202ENST00000360115 WRNQ14191 1432 aaPredicted RBP eCLIP20.52■□□□□ 0.88
MACF1-202ENST00000360115 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.52■□□□□ 0.88
MACF1-202ENST00000360115 CCER1Q8TC90 406 aaPredicted RBP20.52■□□□□ 0.88
MACF1-202ENST00000360115 NEUROD1Q13562 356 aa20.42■□□□□ 0.86
MACF1-202ENST00000360115 TOP2AP11388 1531 aaKnown RBP20.4■□□□□ 0.86
MACF1-202ENST00000360115 DIEXFQ68CQ4 756 aaKnown RBP20.38■□□□□ 0.85
MACF1-202ENST00000360115 CENPBP07199 599 aaPredicted RBP20.36■□□□□ 0.85
MACF1-202ENST00000360115 CEP162Q5TB80 1403 aa20.35■□□□□ 0.85
MACF1-202ENST00000360115 CCDC88BA6NC98 1476 aa20.33■□□□□ 0.84
MACF1-202ENST00000360115 ABCC8Q09428 1581 aa20.32■□□□□ 0.84
MACF1-202ENST00000360115 TNIKQ9UKE5 1360 aa20.31■□□□□ 0.84
MACF1-202ENST00000360115 EEA1Q15075 1411 aa20.28■□□□□ 0.84
MACF1-202ENST00000360115 SMARCA2P51531 1590 aa20.28■□□□□ 0.84
MACF1-202ENST00000360115 GTF3C3Q9Y5Q9 886 aa20.26■□□□□ 0.83
MACF1-202ENST00000360115 SMARCA4P51532 1647 aa20.26■□□□□ 0.83
MACF1-202ENST00000360115 SOGA1O94964 1423 aa20.2■□□□□ 0.82
MACF1-202ENST00000360115 MYT1Q01538 1121 aa20.17■□□□□ 0.82
MACF1-202ENST00000360115 ZNF316A6NFI3 1004 aaPredicted RBP20.15■□□□□ 0.82
MACF1-202ENST00000360115 GOLGA3Q08378 1498 aa20.13■□□□□ 0.81
MACF1-202ENST00000360115 CSRNP3Q8WYN3 585 aa20.12■□□□□ 0.81
MACF1-202ENST00000360115 TTBK1Q5TCY1 1321 aaPredicted RBP20.09■□□□□ 0.81
MACF1-202ENST00000360115 RUSC2Q8N2Y8 1516 aa20.07■□□□□ 0.8
MACF1-202ENST00000360115 UBTFP17480 764 aaKnown RBP20.02■□□□□ 0.79
MACF1-202ENST00000360115 UNC13AQ9UPW8 1703 aa20.01■□□□□ 0.79
MACF1-202ENST00000360115 KIF21BO75037 1637 aa20■□□□□ 0.79
MACF1-202ENST00000360115 CEP164Q9UPV0 1460 aa19.97■□□□□ 0.79
MACF1-202ENST00000360115 PEG3Q9GZU2 1588 aa19.9■□□□□ 0.78
MACF1-202ENST00000360115 VPS8Q8N3P4 1428 aa19.88■□□□□ 0.77
MACF1-202ENST00000360115 BAZ1BQ9UIG0 1483 aaKnown RBP19.88■□□□□ 0.77
MACF1-202ENST00000360115 CLIP1P30622 1438 aa19.87■□□□□ 0.77
MACF1-202ENST00000360115 MIER1Q8N108 512 aa19.87■□□□□ 0.77
MACF1-202ENST00000360115 SYNJ1O43426 1573 aa19.86■□□□□ 0.77
MACF1-202ENST00000360115 YTHDC1Q96MU7 727 aaKnown RBP19.84■□□□□ 0.77
MACF1-202ENST00000360115 HNRNPUL2Q1KMD3 747 aaKnown RBP19.81■□□□□ 0.76
MACF1-202ENST00000360115 CLSPNQ9HAW4 1339 aa19.73■□□□□ 0.75
MACF1-202ENST00000360115 BICRAQ9NZM4 1560 aa19.72■□□□□ 0.75
MACF1-202ENST00000360115 RAPGEF2Q9Y4G8 1499 aa19.71■□□□□ 0.75
MACF1-202ENST00000360115 APLP2Q06481 763 aa19.7■□□□□ 0.74
MACF1-202ENST00000360115 TOP2BQ02880 1626 aa19.62■□□□□ 0.73
MACF1-202ENST00000360115 DHX57Q6P158 1386 aaKnown RBP19.61■□□□□ 0.73
MACF1-202ENST00000360115 ATAD2BQ9ULI0 1458 aa19.6■□□□□ 0.73
MACF1-202ENST00000360115 ERICH3Q5RHP9 1530 aa19.6■□□□□ 0.73
MACF1-202ENST00000360115 BIVM-ERCC5R4GMW8 1640 aa19.57■□□□□ 0.72
MACF1-202ENST00000360115 ARAP1Q96P48 1450 aa19.54■□□□□ 0.72
MACF1-202ENST00000360115 PRXQ9BXM0 1461 aa19.53■□□□□ 0.72
MACF1-202ENST00000360115 PABPN1Q86U42 306 aaKnown RBP eCLIP19.52■□□□□ 0.71
MACF1-202ENST00000360115 CUX2O14529 1486 aa19.51■□□□□ 0.71
MACF1-202ENST00000360115 RRBP1Q9P2E9 1410 aaKnown RBP19.5■□□□□ 0.71
MACF1-202ENST00000360115 SUPT16HQ9Y5B9 1047 aaKnown RBP19.46■□□□□ 0.71
MACF1-202ENST00000360115 RANGAP1P46060 587 aaPredicted RBP19.41■□□□□ 0.7
MACF1-202ENST00000360115 KANK4Q5T7N3 995 aaPredicted RBP19.39■□□□□ 0.69
MACF1-202ENST00000360115 CCNB3Q8WWL7 1395 aa19.34■□□□□ 0.69
MACF1-202ENST00000360115 KIF27Q86VH2 1401 aa19.3■□□□□ 0.68
MACF1-202ENST00000360115 CUX1P39880 1505 aa19.3■□□□□ 0.68
MACF1-202ENST00000360115 ARHGAP35Q9NRY4 1499 aa19.29■□□□□ 0.68
MACF1-202ENST00000360115 MAPKBP1O60336 1514 aa19.26■□□□□ 0.67
MACF1-202ENST00000360115 TSHZ2Q9NRE2 1034 aa19.25■□□□□ 0.67
MACF1-202ENST00000360115 MAP3K1Q13233 1512 aa19.24■□□□□ 0.67
MACF1-202ENST00000360115 HMGXB3Q12766 1538 aa19.24■□□□□ 0.67
MACF1-202ENST00000360115 RAB3GAP2Q9H2M9 1393 aa19.21■□□□□ 0.67
MACF1-202ENST00000360115 TIAM1Q13009 1591 aa19.19■□□□□ 0.66
MACF1-202ENST00000360115 NCAPD3P42695 1498 aa19.16■□□□□ 0.66
MACF1-202ENST00000360115 SETD5Q9C0A6 1442 aa19.14■□□□□ 0.65
MACF1-202ENST00000360115 CFTRP13569 1480 aa19.13■□□□□ 0.65
MACF1-202ENST00000360115 ANP32EQ9BTT0 268 aa19.12■□□□□ 0.65
MACF1-202ENST00000360115 DNAJC5BQ9UF47 199 aa19.11■□□□□ 0.65
MACF1-202ENST00000360115 KCNH8Q96L42 1107 aa19.1■□□□□ 0.65
MACF1-202ENST00000360115 WDR97A6NE52 1622 aa19.09■□□□□ 0.65
MACF1-202ENST00000360115 LRRC9Q6ZRR7 1453 aa19.09■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms