RNA–Protein interactions for RNA: ENST00000552938.1

MRPL42-210, Transcript of mitochondrial ribosomal protein L42, humanhuman

TSL 2

Gene MRPL42, Length 999 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL42-210ENST00000552938 NISCHQ9Y2I1 1504 aa25.47■■□□□ 1.67
MRPL42-210ENST00000552938 AEBP2Q6ZN18 517 aaPredicted RBP24.53■■□□□ 1.52
MRPL42-210ENST00000552938 CHIC1Q5VXU3 224 aa23.7■■□□□ 1.38
MRPL42-210ENST00000552938 CCDC180Q9P1Z9 1646 aa22.53■■□□□ 1.2
MRPL42-210ENST00000552938 ABCC9O60706 1549 aa21.71■■□□□ 1.07
MRPL42-210ENST00000552938 ZCCHC6Q5VYS8 1495 aaKnown RBP21.32■■□□□ 1
MRPL42-210ENST00000552938 DCAF1Q9Y4B6 1507 aa21.1■□□□□ 0.97
MRPL42-210ENST00000552938 MYO15BQ96JP2 1530 aa21.09■□□□□ 0.97
MRPL42-210ENST00000552938 NACADO15069 1562 aa21.08■□□□□ 0.97
MRPL42-210ENST00000552938 RB1CC1Q8TDY2 1594 aa21.02■□□□□ 0.96
MRPL42-210ENST00000552938 DCAF8L2P0C7V8 631 aa21■□□□□ 0.95
MRPL42-210ENST00000552938 SENP3Q9H4L4 574 aaPredicted RBP20.88■□□□□ 0.93
MRPL42-210ENST00000552938 PHF23Q9BUL5 403 aaPredicted RBP20.8■□□□□ 0.92
MRPL42-210ENST00000552938 SCRIBQ14160 1630 aa20.56■□□□□ 0.88
MRPL42-210ENST00000552938 UNC13AQ9UPW8 1703 aa20.54■□□□□ 0.88
MRPL42-210ENST00000552938 BICRAQ9NZM4 1560 aa20.42■□□□□ 0.86
MRPL42-210ENST00000552938 PABPN1Q86U42 306 aaKnown RBP eCLIP20.3■□□□□ 0.84
MRPL42-210ENST00000552938 SHROOM4Q9ULL8 1493 aa20.24■□□□□ 0.83
MRPL42-210ENST00000552938 EIF4G1Q04637 1599 aaKnown RBP19.83■□□□□ 0.77
MRPL42-210ENST00000552938 CECR2Q9BXF3 1484 aa19.81■□□□□ 0.76
MRPL42-210ENST00000552938 BAZ1AQ9NRL2 1556 aaPredicted RBP19.71■□□□□ 0.75
MRPL42-210ENST00000552938 SMARCA4P51532 1647 aa19.7■□□□□ 0.74
MRPL42-210ENST00000552938 POTEDQ86YR6 584 aa19.7■□□□□ 0.74
MRPL42-210ENST00000552938 CC2D2AQ9P2K1 1620 aa19.66■□□□□ 0.74
MRPL42-210ENST00000552938 DNAJC5BQ9UF47 199 aa19.64■□□□□ 0.73
MRPL42-210ENST00000552938 MROH2BQ7Z745 1585 aa19.64■□□□□ 0.73
MRPL42-210ENST00000552938 PEG3Q9GZU2 1588 aa19.53■□□□□ 0.72
MRPL42-210ENST00000552938 RSF1Q96T23 1441 aaPredicted RBP19.51■□□□□ 0.71
MRPL42-210ENST00000552938 ATAD2BQ9ULI0 1458 aa19.51■□□□□ 0.71
MRPL42-210ENST00000552938 SMARCA2P51531 1590 aa19.49■□□□□ 0.71
MRPL42-210ENST00000552938 NCAPD3P42695 1498 aa19.45■□□□□ 0.7
MRPL42-210ENST00000552938 WIZO95785 1651 aa19.42■□□□□ 0.7
MRPL42-210ENST00000552938 HMGXB3Q12766 1538 aa19.41■□□□□ 0.7
MRPL42-210ENST00000552938 FOXD1Q16676 465 aa19.4■□□□□ 0.7
MRPL42-210ENST00000552938 BAZ1BQ9UIG0 1483 aaKnown RBP19.35■□□□□ 0.69
MRPL42-210ENST00000552938 TOP2AP11388 1531 aaKnown RBP19.27■□□□□ 0.68
MRPL42-210ENST00000552938 PLPPR3Q6T4P5 718 aa19.16■□□□□ 0.66
MRPL42-210ENST00000552938 SUPT5HO00267 1087 aaKnown RBP19.15■□□□□ 0.66
MRPL42-210ENST00000552938 CCDC88BA6NC98 1476 aa19■□□□□ 0.63
MRPL42-210ENST00000552938 NESP48681 1621 aa18.89■□□□□ 0.62
MRPL42-210ENST00000552938 CADPSQ9ULU8 1353 aa18.88■□□□□ 0.61
MRPL42-210ENST00000552938 LAMC3Q9Y6N6 1575 aa18.88■□□□□ 0.61
MRPL42-210ENST00000552938 CFTRP13569 1480 aa18.86■□□□□ 0.61
MRPL42-210ENST00000552938 PRDM2Q13029 1718 aa18.71■□□□□ 0.59
MRPL42-210ENST00000552938 PDS5BQ9NTI5 1447 aa18.71■□□□□ 0.59
MRPL42-210ENST00000552938 FANCD2Q9BXW9 1451 aa18.68■□□□□ 0.58
MRPL42-210ENST00000552938 KIF21AQ7Z4S6 1674 aa18.67■□□□□ 0.58
MRPL42-210ENST00000552938 ERCC6Q03468 1493 aa18.67■□□□□ 0.58
MRPL42-210ENST00000552938 CEP164Q9UPV0 1460 aa18.63■□□□□ 0.57
MRPL42-210ENST00000552938 MSH5O43196 834 aa18.59■□□□□ 0.57
MRPL42-210ENST00000552938 THOC2Q8NI27 1593 aaKnown RBP18.58■□□□□ 0.56
MRPL42-210ENST00000552938 MRC2Q9UBG0 1479 aa18.56■□□□□ 0.56
MRPL42-210ENST00000552938 WDR62O43379 1518 aa18.5■□□□□ 0.55
MRPL42-210ENST00000552938 URB2Q14146 1524 aaKnown RBP18.49■□□□□ 0.55
MRPL42-210ENST00000552938 ADRA2BP18089 450 aa18.46■□□□□ 0.55
MRPL42-210ENST00000552938 PPP6R1Q9UPN7 881 aa18.46■□□□□ 0.55
MRPL42-210ENST00000552938 DNMBPQ6XZF7 1577 aa18.44■□□□□ 0.54
MRPL42-210ENST00000552938 TOPBP1Q92547 1522 aa18.43■□□□□ 0.54
MRPL42-210ENST00000552938 ABCC8Q09428 1581 aa18.42■□□□□ 0.54
MRPL42-210ENST00000552938 CUX1P39880 1505 aa18.41■□□□□ 0.54
MRPL42-210ENST00000552938 CUX2O14529 1486 aa18.39■□□□□ 0.54
MRPL42-210ENST00000552938 WRNQ14191 1432 aaPredicted RBP eCLIP18.38■□□□□ 0.53
MRPL42-210ENST00000552938 SYNJ1O43426 1573 aa18.35■□□□□ 0.53
MRPL42-210ENST00000552938 BIVM-ERCC5R4GMW8 1640 aa18.33■□□□□ 0.52
MRPL42-210ENST00000552938 TOP2BQ02880 1626 aa18.32■□□□□ 0.52
MRPL42-210ENST00000552938 POLA1P09884 1462 aaPredicted RBP18.29■□□□□ 0.52
MRPL42-210ENST00000552938 FGD5Q6ZNL6 1462 aa18.29■□□□□ 0.52
MRPL42-210ENST00000552938 PIAS4Q8N2W9 510 aaPredicted RBP18.28■□□□□ 0.52
MRPL42-210ENST00000552938 IFT140Q96RY7 1462 aa18.23■□□□□ 0.51
MRPL42-210ENST00000552938 TARBP1Q13395 1621 aaKnown RBP18.21■□□□□ 0.51
MRPL42-210ENST00000552938 RAD54L2Q9Y4B4 1467 aa18.2■□□□□ 0.5
MRPL42-210ENST00000552938 SOGA1O94964 1423 aa18.17■□□□□ 0.5
MRPL42-210ENST00000552938 WDR97A6NE52 1622 aa18.16■□□□□ 0.5
MRPL42-210ENST00000552938 ABCA10Q8WWZ4 1543 aa18.13■□□□□ 0.49
MRPL42-210ENST00000552938 ZNF608Q9ULD9 1512 aaPredicted RBP18.13■□□□□ 0.49
MRPL42-210ENST00000552938 EIF4G3O43432 1585 aaKnown RBP18.08■□□□□ 0.49
MRPL42-210ENST00000552938 TRIM41Q8WV44 630 aa18.07■□□□□ 0.48
MRPL42-210ENST00000552938 ABCA5Q8WWZ7 1642 aa18.05■□□□□ 0.48
MRPL42-210ENST00000552938 TDRD9Q8NDG6 1382 aaKnown RBP18.04■□□□□ 0.48
MRPL42-210ENST00000552938 AQRO60306 1485 aaKnown RBP eCLIP18.03■□□□□ 0.48
MRPL42-210ENST00000552938 GAPVD1Q14C86 1478 aa17.99■□□□□ 0.47
MRPL42-210ENST00000552938 KIF27Q86VH2 1401 aa17.96■□□□□ 0.47
MRPL42-210ENST00000552938 GRIN2BQ13224 1484 aa17.95■□□□□ 0.46
MRPL42-210ENST00000552938 PBRM1Q86U86 1689 aa17.94■□□□□ 0.46
MRPL42-210ENST00000552938 SNAPC4Q5SXM2 1469 aa17.91■□□□□ 0.46
MRPL42-210ENST00000552938 ERICH3Q5RHP9 1530 aa17.91■□□□□ 0.46
MRPL42-210ENST00000552938 RUSC2Q8N2Y8 1516 aa17.91■□□□□ 0.46
MRPL42-210ENST00000552938 MAGI1Q96QZ7 1491 aaPredicted RBP17.88■□□□□ 0.45
MRPL42-210ENST00000552938 ADAMTS12P58397 1594 aa17.87■□□□□ 0.45
MRPL42-210ENST00000552938 IGF1RP08069 1367 aa17.84■□□□□ 0.45
MRPL42-210ENST00000552938 EEA1Q15075 1411 aa17.82■□□□□ 0.44
MRPL42-210ENST00000552938 SYNJ2O15056 1496 aa17.82■□□□□ 0.44
MRPL42-210ENST00000552938 FHAD1B1AJZ9 1412 aa17.81■□□□□ 0.44
MRPL42-210ENST00000552938 CUL7Q14999 1698 aa17.8■□□□□ 0.44
MRPL42-210ENST00000552938 CHD1O14646 1710 aa17.77■□□□□ 0.44
MRPL42-210ENST00000552938 GRIN2AQ12879 1464 aa17.74■□□□□ 0.43
MRPL42-210ENST00000552938 CARMIL1Q5VZK9 1371 aa17.73■□□□□ 0.43
MRPL42-210ENST00000552938 PRXQ9BXM0 1461 aa17.73■□□□□ 0.43
MRPL42-210ENST00000552938 CHMP7Q8WUX9 453 aaPredicted RBP17.7■□□□□ 0.42
MRPL42-210ENST00000552938 CSRNP3Q8WYN3 585 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms