RNA–Protein interactions for RNA: ENST00000562958.6

CNN2-205, Transcript of calponin 2, humanhuman

TSL 2 BASIC

Gene CNN2, Length 2,194 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN2-205ENST00000562958 NISCHQ9Y2I1 1504 aa29.81■■■□□ 2.36
CNN2-205ENST00000562958 CCDC180Q9P1Z9 1646 aa25.47■■□□□ 1.67
CNN2-205ENST00000562958 ZCCHC6Q5VYS8 1495 aaKnown RBP25.3■■□□□ 1.64
CNN2-205ENST00000562958 SHROOM4Q9ULL8 1493 aa25.14■■□□□ 1.61
CNN2-205ENST00000562958 SUPT5HO00267 1087 aaKnown RBP24.78■■□□□ 1.56
CNN2-205ENST00000562958 DCAF1Q9Y4B6 1507 aa24.68■■□□□ 1.54
CNN2-205ENST00000562958 CHIC1Q5VXU3 224 aa24.36■■□□□ 1.49
CNN2-205ENST00000562958 MYO15BQ96JP2 1530 aa24.27■■□□□ 1.48
CNN2-205ENST00000562958 DCAF8L2P0C7V8 631 aa24.2■■□□□ 1.47
CNN2-205ENST00000562958 HRCP23327 699 aa24.02■■□□□ 1.44
CNN2-205ENST00000562958 ABCC9O60706 1549 aa23.94■■□□□ 1.42
CNN2-205ENST00000562958 PCGF6Q9BYE7 350 aa23.69■■□□□ 1.38
CNN2-205ENST00000562958 SCRIBQ14160 1630 aa23.58■■□□□ 1.36
CNN2-205ENST00000562958 RSF1Q96T23 1441 aaPredicted RBP23.58■■□□□ 1.36
CNN2-205ENST00000562958 RB1CC1Q8TDY2 1594 aa23.5■■□□□ 1.35
CNN2-205ENST00000562958 LOC105371045A0A1W2PR82 267 aa23.45■■□□□ 1.34
CNN2-205ENST00000562958 NACADO15069 1562 aa23.42■■□□□ 1.34
CNN2-205ENST00000562958 TRIM26Q12899 539 aaPredicted RBP23.42■■□□□ 1.34
CNN2-205ENST00000562958 TRIM41Q8WV44 630 aa23.24■■□□□ 1.31
CNN2-205ENST00000562958 PPARGC1BQ86YN6 1023 aaKnown RBP23.18■■□□□ 1.3
CNN2-205ENST00000562958 ZEB1P37275 1124 aaPredicted RBP23.17■■□□□ 1.3
CNN2-205ENST00000562958 MROH2BQ7Z745 1585 aa23.07■■□□□ 1.28
CNN2-205ENST00000562958 CECR2Q9BXF3 1484 aa23.05■■□□□ 1.28
CNN2-205ENST00000562958 BAZ1AQ9NRL2 1556 aaPredicted RBP23.03■■□□□ 1.28
CNN2-205ENST00000562958 WIZO95785 1651 aa22.97■■□□□ 1.27
CNN2-205ENST00000562958 EIF4G1Q04637 1599 aaKnown RBP22.9■■□□□ 1.26
CNN2-205ENST00000562958 FAM9AQ8IZU1 332 aaPredicted RBP22.82■■□□□ 1.24
CNN2-205ENST00000562958 TOP2AP11388 1531 aaKnown RBP22.77■■□□□ 1.23
CNN2-205ENST00000562958 SMARCA4P51532 1647 aa22.68■■□□□ 1.22
CNN2-205ENST00000562958 SMARCA2P51531 1590 aa22.58■■□□□ 1.21
CNN2-205ENST00000562958 WRNQ14191 1432 aaPredicted RBP eCLIP22.56■■□□□ 1.2
CNN2-205ENST00000562958 UNC13AQ9UPW8 1703 aa22.55■■□□□ 1.2
CNN2-205ENST00000562958 EEA1Q15075 1411 aa22.53■■□□□ 1.2
CNN2-205ENST00000562958 CCDC88BA6NC98 1476 aa22.53■■□□□ 1.2
CNN2-205ENST00000562958 ABCC8Q09428 1581 aa22.45■■□□□ 1.18
CNN2-205ENST00000562958 EHMT2Q96KQ7 1210 aa22.43■■□□□ 1.18
CNN2-205ENST00000562958 TNIKQ9UKE5 1360 aa22.41■■□□□ 1.18
CNN2-205ENST00000562958 CEP162Q5TB80 1403 aa22.37■■□□□ 1.17
CNN2-205ENST00000562958 PEG3Q9GZU2 1588 aa22.36■■□□□ 1.17
CNN2-205ENST00000562958 PELP1Q8IZL8 1130 aaKnown RBP22.32■■□□□ 1.16
CNN2-205ENST00000562958 CCER1Q8TC90 406 aaPredicted RBP22.29■■□□□ 1.16
CNN2-205ENST00000562958 GOLGA3Q08378 1498 aa22.26■■□□□ 1.15
CNN2-205ENST00000562958 SOGA1O94964 1423 aa22.26■■□□□ 1.15
CNN2-205ENST00000562958 CSRNP3Q8WYN3 585 aa22.23■■□□□ 1.15
CNN2-205ENST00000562958 BICRAQ9NZM4 1560 aa22.21■■□□□ 1.15
CNN2-205ENST00000562958 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.21■■□□□ 1.15
CNN2-205ENST00000562958 KIF21BO75037 1637 aa22.17■■□□□ 1.14
CNN2-205ENST00000562958 CEP164Q9UPV0 1460 aa22.13■■□□□ 1.13
CNN2-205ENST00000562958 SCAF1Q9H7N4 1312 aaKnown RBP22.12■■□□□ 1.13
CNN2-205ENST00000562958 RUSC2Q8N2Y8 1516 aa22.09■■□□□ 1.13
CNN2-205ENST00000562958 UBTFP17480 764 aaKnown RBP22.06■■□□□ 1.12
CNN2-205ENST00000562958 BAZ1BQ9UIG0 1483 aaKnown RBP22.05■■□□□ 1.12
CNN2-205ENST00000562958 SYNJ1O43426 1573 aa22.04■■□□□ 1.12
CNN2-205ENST00000562958 DIEXFQ68CQ4 756 aaKnown RBP21.99■■□□□ 1.11
CNN2-205ENST00000562958 ACIN1Q9UKV3 1341 aaKnown RBP21.99■■□□□ 1.11
CNN2-205ENST00000562958 ATAD2BQ9ULI0 1458 aa21.99■■□□□ 1.11
CNN2-205ENST00000562958 CENPBP07199 599 aaPredicted RBP21.95■■□□□ 1.1
CNN2-205ENST00000562958 CLIP1P30622 1438 aa21.92■■□□□ 1.1
CNN2-205ENST00000562958 VPS8Q8N3P4 1428 aa21.92■■□□□ 1.1
CNN2-205ENST00000562958 PABPN1Q86U42 306 aaKnown RBP eCLIP21.88■■□□□ 1.09
CNN2-205ENST00000562958 TOP2BQ02880 1626 aa21.87■■□□□ 1.09
CNN2-205ENST00000562958 ZNF316A6NFI3 1004 aaPredicted RBP21.84■■□□□ 1.09
CNN2-205ENST00000562958 BIVM-ERCC5R4GMW8 1640 aa21.84■■□□□ 1.09
CNN2-205ENST00000562958 TTBK1Q5TCY1 1321 aaPredicted RBP21.83■■□□□ 1.09
CNN2-205ENST00000562958 NEUROD1Q13562 356 aa21.8■■□□□ 1.08
CNN2-205ENST00000562958 ERICH3Q5RHP9 1530 aa21.8■■□□□ 1.08
CNN2-205ENST00000562958 RAPGEF2Q9Y4G8 1499 aa21.77■■□□□ 1.08
CNN2-205ENST00000562958 APLP2Q06481 763 aa21.75■■□□□ 1.07
CNN2-205ENST00000562958 HMGXB3Q12766 1538 aa21.7■■□□□ 1.06
CNN2-205ENST00000562958 CLSPNQ9HAW4 1339 aa21.67■■□□□ 1.06
CNN2-205ENST00000562958 PRXQ9BXM0 1461 aa21.66■■□□□ 1.06
CNN2-205ENST00000562958 GTF3C3Q9Y5Q9 886 aa21.63■■□□□ 1.05
CNN2-205ENST00000562958 HNRNPUL2Q1KMD3 747 aaKnown RBP21.61■■□□□ 1.05
CNN2-205ENST00000562958 NCAPD3P42695 1498 aa21.6■■□□□ 1.05
CNN2-205ENST00000562958 ARAP1Q96P48 1450 aa21.55■■□□□ 1.04
CNN2-205ENST00000562958 KIF27Q86VH2 1401 aa21.52■■□□□ 1.04
CNN2-205ENST00000562958 CUX1P39880 1505 aa21.5■■□□□ 1.03
CNN2-205ENST00000562958 PRDM2Q13029 1718 aa21.49■■□□□ 1.03
CNN2-205ENST00000562958 RRBP1Q9P2E9 1410 aaKnown RBP21.47■■□□□ 1.03
CNN2-205ENST00000562958 CFTRP13569 1480 aa21.45■■□□□ 1.03
CNN2-205ENST00000562958 CUX2O14529 1486 aa21.44■■□□□ 1.02
CNN2-205ENST00000562958 DHX57Q6P158 1386 aaKnown RBP21.42■■□□□ 1.02
CNN2-205ENST00000562958 MIER1Q8N108 512 aa21.4■■□□□ 1.02
CNN2-205ENST00000562958 MAP3K1Q13233 1512 aa21.36■■□□□ 1.01
CNN2-205ENST00000562958 MYT1Q01538 1121 aa21.35■■□□□ 1.01
CNN2-205ENST00000562958 ARHGAP35Q9NRY4 1499 aa21.33■■□□□ 1
CNN2-205ENST00000562958 RANGAP1P46060 587 aaPredicted RBP21.3■■□□□ 1
CNN2-205ENST00000562958 CCNB3Q8WWL7 1395 aa21.29■■□□□ 1
CNN2-205ENST00000562958 YTHDC1Q96MU7 727 aaKnown RBP21.29■■□□□ 1
CNN2-205ENST00000562958 KANK4Q5T7N3 995 aaPredicted RBP21.27■■□□□ 1
CNN2-205ENST00000562958 TIAM1Q13009 1591 aa21.22■□□□□ 0.99
CNN2-205ENST00000562958 IGF1RP08069 1367 aa21.16■□□□□ 0.98
CNN2-205ENST00000562958 CFAP43Q8NDM7 1665 aa21.13■□□□□ 0.97
CNN2-205ENST00000562958 FHAD1B1AJZ9 1412 aa21.13■□□□□ 0.97
CNN2-205ENST00000562958 CADPSQ9ULU8 1353 aa21.13■□□□□ 0.97
CNN2-205ENST00000562958 CARMIL1Q5VZK9 1371 aa21.1■□□□□ 0.97
CNN2-205ENST00000562958 LRRC9Q6ZRR7 1453 aa21.09■□□□□ 0.97
CNN2-205ENST00000562958 FGD5Q6ZNL6 1462 aa21.08■□□□□ 0.97
CNN2-205ENST00000562958 RAB3GAP2Q9H2M9 1393 aa21.06■□□□□ 0.96
CNN2-205ENST00000562958 MAPKBP1O60336 1514 aa21.06■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms