RNA–Protein interactions for RNA: ENST00000564572.1

CNN2-206, Transcript of calponin 2, humanhuman

Gene CNN2, Length 2,266 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN2-206ENST00000564572 NISCHQ9Y2I1 1504 aa32.46■■■□□ 2.79
CNN2-206ENST00000564572 CCDC180Q9P1Z9 1646 aa28.27■■■□□ 2.12
CNN2-206ENST00000564572 ZCCHC6Q5VYS8 1495 aaKnown RBP27.34■■□□□ 1.97
CNN2-206ENST00000564572 DCAF1Q9Y4B6 1507 aa26.88■■□□□ 1.89
CNN2-206ENST00000564572 DCAF8L2P0C7V8 631 aa26.56■■□□□ 1.84
CNN2-206ENST00000564572 SHROOM4Q9ULL8 1493 aa26.54■■□□□ 1.84
CNN2-206ENST00000564572 MYO15BQ96JP2 1530 aa26.48■■□□□ 1.83
CNN2-206ENST00000564572 ABCC9O60706 1549 aa26.41■■□□□ 1.82
CNN2-206ENST00000564572 NACADO15069 1562 aa26.22■■□□□ 1.79
CNN2-206ENST00000564572 SCRIBQ14160 1630 aa25.97■■□□□ 1.75
CNN2-206ENST00000564572 RB1CC1Q8TDY2 1594 aa25.94■■□□□ 1.74
CNN2-206ENST00000564572 SUPT5HO00267 1087 aaKnown RBP25.62■■□□□ 1.69
CNN2-206ENST00000564572 UNC13AQ9UPW8 1703 aa25.5■■□□□ 1.67
CNN2-206ENST00000564572 RSF1Q96T23 1441 aaPredicted RBP25.24■■□□□ 1.63
CNN2-206ENST00000564572 CECR2Q9BXF3 1484 aa25.18■■□□□ 1.62
CNN2-206ENST00000564572 BICRAQ9NZM4 1560 aa25.18■■□□□ 1.62
CNN2-206ENST00000564572 MROH2BQ7Z745 1585 aa25.08■■□□□ 1.61
CNN2-206ENST00000564572 BAZ1AQ9NRL2 1556 aaPredicted RBP25.06■■□□□ 1.6
CNN2-206ENST00000564572 SMARCA4P51532 1647 aa24.93■■□□□ 1.58
CNN2-206ENST00000564572 WIZO95785 1651 aa24.91■■□□□ 1.58
CNN2-206ENST00000564572 PABPN1Q86U42 306 aaKnown RBP eCLIP24.89■■□□□ 1.58
CNN2-206ENST00000564572 CHIC1Q5VXU3 224 aa24.69■■□□□ 1.54
CNN2-206ENST00000564572 TOP2AP11388 1531 aaKnown RBP24.67■■□□□ 1.54
CNN2-206ENST00000564572 PEG3Q9GZU2 1588 aa24.64■■□□□ 1.53
CNN2-206ENST00000564572 SMARCA2P51531 1590 aa24.44■■□□□ 1.5
CNN2-206ENST00000564572 ATAD2BQ9ULI0 1458 aa24.43■■□□□ 1.5
CNN2-206ENST00000564572 EIF4G1Q04637 1599 aaKnown RBP24.39■■□□□ 1.5
CNN2-206ENST00000564572 CCDC88BA6NC98 1476 aa24.37■■□□□ 1.49
CNN2-206ENST00000564572 BAZ1BQ9UIG0 1483 aaKnown RBP24.3■■□□□ 1.48
CNN2-206ENST00000564572 HMGXB3Q12766 1538 aa24.21■■□□□ 1.47
CNN2-206ENST00000564572 NCAPD3P42695 1498 aa24.17■■□□□ 1.46
CNN2-206ENST00000564572 TRIM41Q8WV44 630 aa24.09■■□□□ 1.45
CNN2-206ENST00000564572 CC2D2AQ9P2K1 1620 aa23.96■■□□□ 1.43
CNN2-206ENST00000564572 ABCC8Q09428 1581 aa23.95■■□□□ 1.42
CNN2-206ENST00000564572 WRNQ14191 1432 aaPredicted RBP eCLIP23.75■■□□□ 1.39
CNN2-206ENST00000564572 LOC105371045A0A1W2PR82 267 aa23.71■■□□□ 1.39
CNN2-206ENST00000564572 PRDM2Q13029 1718 aa23.71■■□□□ 1.39
CNN2-206ENST00000564572 CFTRP13569 1480 aa23.71■■□□□ 1.39
CNN2-206ENST00000564572 SYNJ1O43426 1573 aa23.69■■□□□ 1.38
CNN2-206ENST00000564572 FAM9AQ8IZU1 332 aaPredicted RBP23.62■■□□□ 1.37
CNN2-206ENST00000564572 TOP2BQ02880 1626 aa23.59■■□□□ 1.37
CNN2-206ENST00000564572 BIVM-ERCC5R4GMW8 1640 aa23.58■■□□□ 1.37
CNN2-206ENST00000564572 EEA1Q15075 1411 aa23.55■■□□□ 1.36
CNN2-206ENST00000564572 CADPSQ9ULU8 1353 aa23.55■■□□□ 1.36
CNN2-206ENST00000564572 SOGA1O94964 1423 aa23.51■■□□□ 1.35
CNN2-206ENST00000564572 CUX1P39880 1505 aa23.44■■□□□ 1.34
CNN2-206ENST00000564572 RUSC2Q8N2Y8 1516 aa23.42■■□□□ 1.34
CNN2-206ENST00000564572 LAMC3Q9Y6N6 1575 aa23.35■■□□□ 1.33
CNN2-206ENST00000564572 CSRNP3Q8WYN3 585 aa23.33■■□□□ 1.32
CNN2-206ENST00000564572 FANCD2Q9BXW9 1451 aa23.31■■□□□ 1.32
CNN2-206ENST00000564572 KIF21BO75037 1637 aa23.28■■□□□ 1.32
CNN2-206ENST00000564572 NESP48681 1621 aa23.27■■□□□ 1.32
CNN2-206ENST00000564572 EHMT2Q96KQ7 1210 aa23.25■■□□□ 1.31
CNN2-206ENST00000564572 GOLGA3Q08378 1498 aa23.23■■□□□ 1.31
CNN2-206ENST00000564572 CEP164Q9UPV0 1460 aa23.21■■□□□ 1.31
CNN2-206ENST00000564572 DNAJC5BQ9UF47 199 aa23.19■■□□□ 1.3
CNN2-206ENST00000564572 DNMBPQ6XZF7 1577 aa23.18■■□□□ 1.3
CNN2-206ENST00000564572 TNIKQ9UKE5 1360 aa23.18■■□□□ 1.3
CNN2-206ENST00000564572 FGD5Q6ZNL6 1462 aa23.14■■□□□ 1.29
CNN2-206ENST00000564572 KIF27Q86VH2 1401 aa23.12■■□□□ 1.29
CNN2-206ENST00000564572 PDS5BQ9NTI5 1447 aa23.11■■□□□ 1.29
CNN2-206ENST00000564572 TOPBP1Q92547 1522 aa23.1■■□□□ 1.29
CNN2-206ENST00000564572 CEP162Q5TB80 1403 aa23.08■■□□□ 1.29
CNN2-206ENST00000564572 ERICH3Q5RHP9 1530 aa23.07■■□□□ 1.28
CNN2-206ENST00000564572 KIF21AQ7Z4S6 1674 aa23.07■■□□□ 1.28
CNN2-206ENST00000564572 PRXQ9BXM0 1461 aa23.06■■□□□ 1.28
CNN2-206ENST00000564572 RAPGEF2Q9Y4G8 1499 aa23.05■■□□□ 1.28
CNN2-206ENST00000564572 URB2Q14146 1524 aaKnown RBP23.02■■□□□ 1.28
CNN2-206ENST00000564572 UBTFP17480 764 aaKnown RBP23.02■■□□□ 1.28
CNN2-206ENST00000564572 CUX2O14529 1486 aa23.01■■□□□ 1.27
CNN2-206ENST00000564572 POLA1P09884 1462 aaPredicted RBP23■■□□□ 1.27
CNN2-206ENST00000564572 ABCA10Q8WWZ4 1543 aa22.96■■□□□ 1.27
CNN2-206ENST00000564572 WDR97A6NE52 1622 aa22.94■■□□□ 1.26
CNN2-206ENST00000564572 RAD54L2Q9Y4B4 1467 aa22.9■■□□□ 1.26
CNN2-206ENST00000564572 IGF1RP08069 1367 aa22.88■■□□□ 1.25
CNN2-206ENST00000564572 PCGF6Q9BYE7 350 aa22.87■■□□□ 1.25
CNN2-206ENST00000564572 CLIP1P30622 1438 aa22.84■■□□□ 1.25
CNN2-206ENST00000564572 TRIM26Q12899 539 aaPredicted RBP22.84■■□□□ 1.25
CNN2-206ENST00000564572 MRC2Q9UBG0 1479 aa22.83■■□□□ 1.24
CNN2-206ENST00000564572 ABCA5Q8WWZ7 1642 aa22.79■■□□□ 1.24
CNN2-206ENST00000564572 CUL7Q14999 1698 aa22.77■■□□□ 1.24
CNN2-206ENST00000564572 TARBP1Q13395 1621 aaKnown RBP22.76■■□□□ 1.23
CNN2-206ENST00000564572 CARMIL1Q5VZK9 1371 aa22.76■■□□□ 1.23
CNN2-206ENST00000564572 WDR62O43379 1518 aa22.73■■□□□ 1.23
CNN2-206ENST00000564572 VPS8Q8N3P4 1428 aa22.7■■□□□ 1.22
CNN2-206ENST00000564572 GAPVD1Q14C86 1478 aa22.66■■□□□ 1.22
CNN2-206ENST00000564572 THOC2Q8NI27 1593 aaKnown RBP22.63■■□□□ 1.21
CNN2-206ENST00000564572 ARAP1Q96P48 1450 aa22.63■■□□□ 1.21
CNN2-206ENST00000564572 TDRD9Q8NDG6 1382 aaKnown RBP22.63■■□□□ 1.21
CNN2-206ENST00000564572 ERCC6Q03468 1493 aa22.62■■□□□ 1.21
CNN2-206ENST00000564572 PBRM1Q86U86 1689 aa22.6■■□□□ 1.21
CNN2-206ENST00000564572 IFT140Q96RY7 1462 aa22.58■■□□□ 1.21
CNN2-206ENST00000564572 CTTNBP2Q8WZ74 1663 aa22.57■■□□□ 1.2
CNN2-206ENST00000564572 ARHGAP35Q9NRY4 1499 aa22.57■■□□□ 1.2
CNN2-206ENST00000564572 PPARGC1BQ86YN6 1023 aaKnown RBP22.56■■□□□ 1.2
CNN2-206ENST00000564572 RANGAP1P46060 587 aaPredicted RBP22.54■■□□□ 1.2
CNN2-206ENST00000564572 ADAMTS12P58397 1594 aa22.47■■□□□ 1.19
CNN2-206ENST00000564572 AQRO60306 1485 aaKnown RBP eCLIP22.46■■□□□ 1.19
CNN2-206ENST00000564572 GRIN2BQ13224 1484 aa22.45■■□□□ 1.19
CNN2-206ENST00000564572 EFCAB5A4FU69 1503 aa22.44■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms