RNA–Protein interactions for RNA: ENST00000445205.1

PPM1F-205, Transcript of protein phosphatase, Mg2+/Mn2+ dependent 1F, humanhuman

TSL 5

Gene PPM1F, Length 650 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPM1F-205ENST00000445205 NISCHQ9Y2I1 1504 aa28.54■■■□□ 2.16
PPM1F-205ENST00000445205 CCDC180Q9P1Z9 1646 aa25.34■■□□□ 1.65
PPM1F-205ENST00000445205 ABCC9O60706 1549 aa24.8■■□□□ 1.56
PPM1F-205ENST00000445205 DCAF8L2P0C7V8 631 aa23.87■■□□□ 1.41
PPM1F-205ENST00000445205 RB1CC1Q8TDY2 1594 aa23.84■■□□□ 1.41
PPM1F-205ENST00000445205 NACADO15069 1562 aa23.83■■□□□ 1.41
PPM1F-205ENST00000445205 ZCCHC6Q5VYS8 1495 aaKnown RBP23.76■■□□□ 1.39
PPM1F-205ENST00000445205 MYO15BQ96JP2 1530 aa23.69■■□□□ 1.38
PPM1F-205ENST00000445205 DCAF1Q9Y4B6 1507 aa23.6■■□□□ 1.37
PPM1F-205ENST00000445205 UNC13AQ9UPW8 1703 aa23.33■■□□□ 1.32
PPM1F-205ENST00000445205 PABPN1Q86U42 306 aaKnown RBP eCLIP23.19■■□□□ 1.3
PPM1F-205ENST00000445205 BICRAQ9NZM4 1560 aa23.14■■□□□ 1.3
PPM1F-205ENST00000445205 SCRIBQ14160 1630 aa23.13■■□□□ 1.29
PPM1F-205ENST00000445205 SHROOM4Q9ULL8 1493 aa22.85■■□□□ 1.25
PPM1F-205ENST00000445205 DNAJC5BQ9UF47 199 aa22.78■■□□□ 1.24
PPM1F-205ENST00000445205 EIF4G1Q04637 1599 aaKnown RBP22.52■■□□□ 1.2
PPM1F-205ENST00000445205 CC2D2AQ9P2K1 1620 aa22.43■■□□□ 1.18
PPM1F-205ENST00000445205 CECR2Q9BXF3 1484 aa22.27■■□□□ 1.16
PPM1F-205ENST00000445205 SMARCA4P51532 1647 aa22.13■■□□□ 1.13
PPM1F-205ENST00000445205 BAZ1AQ9NRL2 1556 aaPredicted RBP22.1■■□□□ 1.13
PPM1F-205ENST00000445205 ATAD2BQ9ULI0 1458 aa22.02■■□□□ 1.12
PPM1F-205ENST00000445205 MROH2BQ7Z745 1585 aa22■■□□□ 1.11
PPM1F-205ENST00000445205 NCAPD3P42695 1498 aa22■■□□□ 1.11
PPM1F-205ENST00000445205 SMARCA2P51531 1590 aa21.97■■□□□ 1.11
PPM1F-205ENST00000445205 PEG3Q9GZU2 1588 aa21.91■■□□□ 1.1
PPM1F-205ENST00000445205 HMGXB3Q12766 1538 aa21.87■■□□□ 1.09
PPM1F-205ENST00000445205 BAZ1BQ9UIG0 1483 aaKnown RBP21.82■■□□□ 1.08
PPM1F-205ENST00000445205 WIZO95785 1651 aa21.77■■□□□ 1.08
PPM1F-205ENST00000445205 RSF1Q96T23 1441 aaPredicted RBP21.76■■□□□ 1.07
PPM1F-205ENST00000445205 TOP2AP11388 1531 aaKnown RBP21.51■■□□□ 1.03
PPM1F-205ENST00000445205 NESP48681 1621 aa21.47■■□□□ 1.03
PPM1F-205ENST00000445205 LAMC3Q9Y6N6 1575 aa21.4■■□□□ 1.02
PPM1F-205ENST00000445205 CADPSQ9ULU8 1353 aa21.36■■□□□ 1.01
PPM1F-205ENST00000445205 ERCC6Q03468 1493 aa21.34■■□□□ 1.01
PPM1F-205ENST00000445205 CCDC88BA6NC98 1476 aa21.29■■□□□ 1
PPM1F-205ENST00000445205 PDS5BQ9NTI5 1447 aa21.26■□□□□ 0.99
PPM1F-205ENST00000445205 SUPT5HO00267 1087 aaKnown RBP21.25■□□□□ 0.99
PPM1F-205ENST00000445205 CFTRP13569 1480 aa21.24■□□□□ 0.99
PPM1F-205ENST00000445205 KIF21AQ7Z4S6 1674 aa21.21■□□□□ 0.99
PPM1F-205ENST00000445205 THOC2Q8NI27 1593 aaKnown RBP21.12■□□□□ 0.97
PPM1F-205ENST00000445205 CUX2O14529 1486 aa21.11■□□□□ 0.97
PPM1F-205ENST00000445205 FANCD2Q9BXW9 1451 aa21.1■□□□□ 0.97
PPM1F-205ENST00000445205 CEP164Q9UPV0 1460 aa21.07■□□□□ 0.96
PPM1F-205ENST00000445205 PRDM2Q13029 1718 aa21.07■□□□□ 0.96
PPM1F-205ENST00000445205 MRC2Q9UBG0 1479 aa21.03■□□□□ 0.96
PPM1F-205ENST00000445205 WDR62O43379 1518 aa20.96■□□□□ 0.95
PPM1F-205ENST00000445205 URB2Q14146 1524 aaKnown RBP20.9■□□□□ 0.94
PPM1F-205ENST00000445205 TOPBP1Q92547 1522 aa20.78■□□□□ 0.92
PPM1F-205ENST00000445205 ABCC8Q09428 1581 aa20.77■□□□□ 0.92
PPM1F-205ENST00000445205 DNMBPQ6XZF7 1577 aa20.75■□□□□ 0.91
PPM1F-205ENST00000445205 CUX1P39880 1505 aa20.63■□□□□ 0.89
PPM1F-205ENST00000445205 IFT140Q96RY7 1462 aa20.62■□□□□ 0.89
PPM1F-205ENST00000445205 POLA1P09884 1462 aaPredicted RBP20.6■□□□□ 0.89
PPM1F-205ENST00000445205 TARBP1Q13395 1621 aaKnown RBP20.56■□□□□ 0.88
PPM1F-205ENST00000445205 FGD5Q6ZNL6 1462 aa20.56■□□□□ 0.88
PPM1F-205ENST00000445205 ZNF608Q9ULD9 1512 aaPredicted RBP20.55■□□□□ 0.88
PPM1F-205ENST00000445205 SOGA1O94964 1423 aa20.53■□□□□ 0.88
PPM1F-205ENST00000445205 RAD54L2Q9Y4B4 1467 aa20.52■□□□□ 0.88
PPM1F-205ENST00000445205 WRNQ14191 1432 aaPredicted RBP eCLIP20.51■□□□□ 0.87
PPM1F-205ENST00000445205 DNAJC5Q9H3Z4 198 aa20.48■□□□□ 0.87
PPM1F-205ENST00000445205 SYNJ1O43426 1573 aa20.46■□□□□ 0.87
PPM1F-205ENST00000445205 TOP2BQ02880 1626 aa20.45■□□□□ 0.87
PPM1F-205ENST00000445205 BIVM-ERCC5R4GMW8 1640 aa20.45■□□□□ 0.87
PPM1F-205ENST00000445205 EIF4G3O43432 1585 aaKnown RBP20.45■□□□□ 0.86
PPM1F-205ENST00000445205 AQRO60306 1485 aaKnown RBP eCLIP20.44■□□□□ 0.868e-7■■■■■ 33.1
PPM1F-205ENST00000445205 TDRD9Q8NDG6 1382 aaKnown RBP20.42■□□□□ 0.86
PPM1F-205ENST00000445205 WDR97A6NE52 1622 aa20.38■□□□□ 0.85
PPM1F-205ENST00000445205 ABCA10Q8WWZ4 1543 aa20.35■□□□□ 0.85
PPM1F-205ENST00000445205 OSCARQ8IYS5 282 aa20.28■□□□□ 0.84
PPM1F-205ENST00000445205 GAPVD1Q14C86 1478 aa20.28■□□□□ 0.84
PPM1F-205ENST00000445205 GRIN2BQ13224 1484 aa20.27■□□□□ 0.84
PPM1F-205ENST00000445205 ABCA5Q8WWZ7 1642 aa20.27■□□□□ 0.83
PPM1F-205ENST00000445205 SNAPC4Q5SXM2 1469 aa20.23■□□□□ 0.83
PPM1F-205ENST00000445205 PBRM1Q86U86 1689 aa20.22■□□□□ 0.83
PPM1F-205ENST00000445205 MAGI1Q96QZ7 1491 aaPredicted RBP20.2■□□□□ 0.82
PPM1F-205ENST00000445205 CHD1O14646 1710 aa20.2■□□□□ 0.82
PPM1F-205ENST00000445205 FBLN2P98095 1184 aa20.2■□□□□ 0.82
PPM1F-205ENST00000445205 CHMP7Q8WUX9 453 aaPredicted RBP20.14■□□□□ 0.81
PPM1F-205ENST00000445205 SYNJ2O15056 1496 aa20.13■□□□□ 0.81
PPM1F-205ENST00000445205 ERICH3Q5RHP9 1530 aa20.11■□□□□ 0.81
PPM1F-205ENST00000445205 TRIM41Q8WV44 630 aa20.07■□□□□ 0.8
PPM1F-205ENST00000445205 KIF27Q86VH2 1401 aa20.07■□□□□ 0.8
PPM1F-205ENST00000445205 ADAMTS12P58397 1594 aa20.07■□□□□ 0.8
PPM1F-205ENST00000445205 FHAD1B1AJZ9 1412 aa20.04■□□□□ 0.8
PPM1F-205ENST00000445205 IGF1RP08069 1367 aa20.02■□□□□ 0.8
PPM1F-205ENST00000445205 GRIN2AQ12879 1464 aa20.01■□□□□ 0.79
PPM1F-205ENST00000445205 CLASP1Q7Z460 1538 aa19.98■□□□□ 0.79
PPM1F-205ENST00000445205 RUSC2Q8N2Y8 1516 aa19.94■□□□□ 0.78
PPM1F-205ENST00000445205 RIMBP3CA6NJZ7 1639 aa19.93■□□□□ 0.78
PPM1F-205ENST00000445205 RIMBP3BA6NNM3 1639 aa19.93■□□□□ 0.78
PPM1F-205ENST00000445205 RIMBP3Q9UFD9 1639 aa19.93■□□□□ 0.78
PPM1F-205ENST00000445205 ARHGEF11O15085 1522 aa19.92■□□□□ 0.78
PPM1F-205ENST00000445205 CUL7Q14999 1698 aa19.92■□□□□ 0.78
PPM1F-205ENST00000445205 NUP160Q12769 1436 aa19.92■□□□□ 0.78
PPM1F-205ENST00000445205 CEP170Q5SW79 1584 aa19.91■□□□□ 0.78
PPM1F-205ENST00000445205 CARMIL1Q5VZK9 1371 aa19.88■□□□□ 0.77
PPM1F-205ENST00000445205 CHIC1Q5VXU3 224 aa19.85■□□□□ 0.77
PPM1F-205ENST00000445205 SHROOM2Q13796 1616 aa19.77■□□□□ 0.76
PPM1F-205ENST00000445205 CYB5RLQ6IPT4 315 aa19.77■□□□□ 0.76
PPM1F-205ENST00000445205 ARAP1Q96P48 1450 aa19.77■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 134.6 ms