RNA–Protein interactions for RNA: ENST00000623652.1

PPM1F-210, Transcript of protein phosphatase, Mg2+/Mn2+ dependent 1F, humanhuman

TSL 5

Gene PPM1F, Length 3,157 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPM1F-210ENST00000623652 NISCHQ9Y2I1 1504 aa16.53■□□□□ 0.24
PPM1F-210ENST00000623652 HRCP23327 699 aa15.32■□□□□ 0.04
PPM1F-210ENST00000623652 PPARGC1BQ86YN6 1023 aaKnown RBP15.11■□□□□ 0.01
PPM1F-210ENST00000623652 PCGF6Q9BYE7 350 aa15.09■□□□□ 0.01
PPM1F-210ENST00000623652 SUPT5HO00267 1087 aaKnown RBP15.06■□□□□ 0
PPM1F-210ENST00000623652 SHROOM4Q9ULL8 1493 aa15.04■□□□□ -0
PPM1F-210ENST00000623652 PELP1Q8IZL8 1130 aaKnown RBP14.91□□□□□ -0.02
PPM1F-210ENST00000623652 SLC24A1O60721 1099 aa14.83□□□□□ -0.04
PPM1F-210ENST00000623652 CHIC1Q5VXU3 224 aa14.79□□□□□ -0.04
PPM1F-210ENST00000623652 MYO15BQ96JP2 1530 aa14.77□□□□□ -0.04
PPM1F-210ENST00000623652 EHMT2Q96KQ7 1210 aa14.65□□□□□ -0.06
PPM1F-210ENST00000623652 DCAF8L2P0C7V8 631 aa14.59□□□□□ -0.07
PPM1F-210ENST00000623652 SCAF1Q9H7N4 1312 aaKnown RBP14.59□□□□□ -0.07
PPM1F-210ENST00000623652 MYT1Q01538 1121 aa14.54□□□□□ -0.08
PPM1F-210ENST00000623652 LOC105371045A0A1W2PR82 267 aa14.49□□□□□ -0.09
PPM1F-210ENST00000623652 TRIM26Q12899 539 aaPredicted RBP14.46□□□□□ -0.09
PPM1F-210ENST00000623652 CCDC180Q9P1Z9 1646 aa14.42□□□□□ -0.1
PPM1F-210ENST00000623652 DCAF1Q9Y4B6 1507 aa14.41□□□□□ -0.1
PPM1F-210ENST00000623652 PRKCSHP14314 528 aaPredicted RBP14.41□□□□□ -0.1
PPM1F-210ENST00000623652 ZEB1P37275 1124 aaPredicted RBP14.35□□□□□ -0.11
PPM1F-210ENST00000623652 AEBP2Q6ZN18 517 aaPredicted RBP14.33□□□□□ -0.12
PPM1F-210ENST00000623652 PLPPR3Q6T4P5 718 aa14.19□□□□□ -0.14
PPM1F-210ENST00000623652 ACIN1Q9UKV3 1341 aaKnown RBP14.19□□□□□ -0.14
PPM1F-210ENST00000623652 NEUROD1Q13562 356 aa14.18□□□□□ -0.14
PPM1F-210ENST00000623652 GTF3C3Q9Y5Q9 886 aa14.14□□□□□ -0.15
PPM1F-210ENST00000623652 ZCCHC6Q5VYS8 1495 aaKnown RBP14.06□□□□□ -0.16
PPM1F-210ENST00000623652 CENPBP07199 599 aaPredicted RBP14.04□□□□□ -0.16
PPM1F-210ENST00000623652 FAM9AQ8IZU1 332 aaPredicted RBP13.97□□□□□ -0.17
PPM1F-210ENST00000623652 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.94□□□□□ -0.18
PPM1F-210ENST00000623652 DIEXFQ68CQ4 756 aaKnown RBP13.94□□□□□ -0.18
PPM1F-210ENST00000623652 TTBK1Q5TCY1 1321 aaPredicted RBP13.94□□□□□ -0.18
PPM1F-210ENST00000623652 CCER1Q8TC90 406 aaPredicted RBP13.92□□□□□ -0.18
PPM1F-210ENST00000623652 TRIM41Q8WV44 630 aa13.85□□□□□ -0.19
PPM1F-210ENST00000623652 YTHDC1Q96MU7 727 aaKnown RBP13.84□□□□□ -0.19
PPM1F-210ENST00000623652 RTN4Q9NQC3 1192 aaKnown RBP13.82□□□□□ -0.2
PPM1F-210ENST00000623652 ERICH6Q7L0X2 663 aa13.8□□□□□ -0.2
PPM1F-210ENST00000623652 BCL11AQ9H165 835 aa13.8□□□□□ -0.2
PPM1F-210ENST00000623652 APLP2Q06481 763 aa13.69□□□□□ -0.22
PPM1F-210ENST00000623652 PHF23Q9BUL5 403 aaPredicted RBP13.66□□□□□ -0.22
PPM1F-210ENST00000623652 ZNF316A6NFI3 1004 aaPredicted RBP13.6□□□□□ -0.23
PPM1F-210ENST00000623652 MIER1Q8N108 512 aa13.56□□□□□ -0.24
PPM1F-210ENST00000623652 ABCC9O60706 1549 aa13.55□□□□□ -0.24
PPM1F-210ENST00000623652 ANP32EQ9BTT0 268 aa13.43□□□□□ -0.26
PPM1F-210ENST00000623652 RSF1Q96T23 1441 aaPredicted RBP13.42□□□□□ -0.26
PPM1F-210ENST00000623652 KCNA4P22459 653 aa13.38□□□□□ -0.27
PPM1F-210ENST00000623652 NACADO15069 1562 aa13.38□□□□□ -0.27
PPM1F-210ENST00000623652 SUPT16HQ9Y5B9 1047 aaKnown RBP13.38□□□□□ -0.27
PPM1F-210ENST00000623652 RB1CC1Q8TDY2 1594 aa13.37□□□□□ -0.27
PPM1F-210ENST00000623652 TSHZ2Q9NRE2 1034 aa13.34□□□□□ -0.27
PPM1F-210ENST00000623652 CSRNP3Q8WYN3 585 aa13.32□□□□□ -0.28
PPM1F-210ENST00000623652 HNRNPUL2Q1KMD3 747 aaKnown RBP13.3□□□□□ -0.28
PPM1F-210ENST00000623652 PLEKHG5O94827 1062 aa13.29□□□□□ -0.28
PPM1F-210ENST00000623652 DAXXQ9UER7 740 aaPredicted RBP13.28□□□□□ -0.28
PPM1F-210ENST00000623652 EIF5BO60841 1220 aaKnown RBP13.27□□□□□ -0.28
PPM1F-210ENST00000623652 CLSPNQ9HAW4 1339 aa13.23□□□□□ -0.29
PPM1F-210ENST00000623652 BCANQ96GW7 911 aa13.22□□□□□ -0.29
PPM1F-210ENST00000623652 CEP162Q5TB80 1403 aa13.18□□□□□ -0.3
PPM1F-210ENST00000623652 UBTFP17480 764 aaKnown RBP13.18□□□□□ -0.3
PPM1F-210ENST00000623652 WRNQ14191 1432 aaPredicted RBP eCLIP13.17□□□□□ -0.3
PPM1F-210ENST00000623652 UNC13AQ9UPW8 1703 aa13.15□□□□□ -0.3
PPM1F-210ENST00000623652 SCRIBQ14160 1630 aa13.15□□□□□ -0.3
PPM1F-210ENST00000623652 FKBP8Q14318 412 aa13.07□□□□□ -0.32
PPM1F-210ENST00000623652 RBM19Q9Y4C8 960 aaKnown RBP13.05□□□□□ -0.32
PPM1F-210ENST00000623652 TNIKQ9UKE5 1360 aa13.04□□□□□ -0.32
PPM1F-210ENST00000623652 KCNH8Q96L42 1107 aa13.04□□□□□ -0.32
PPM1F-210ENST00000623652 CECR2Q9BXF3 1484 aa13.02□□□□□ -0.32
PPM1F-210ENST00000623652 CCDC88BA6NC98 1476 aa13.01□□□□□ -0.33
PPM1F-210ENST00000623652 SOGA1O94964 1423 aa13□□□□□ -0.33
PPM1F-210ENST00000623652 ITGAEP38570 1179 aa13□□□□□ -0.33
PPM1F-210ENST00000623652 RANGAP1P46060 587 aaPredicted RBP13□□□□□ -0.33
PPM1F-210ENST00000623652 NCBP3Q53F19 620 aaKnown RBP12.99□□□□□ -0.33
PPM1F-210ENST00000623652 MROH2BQ7Z745 1585 aa12.98□□□□□ -0.33
PPM1F-210ENST00000623652 NEFLP07196 543 aa12.97□□□□□ -0.33
PPM1F-210ENST00000623652 ABCC8Q09428 1581 aa12.97□□□□□ -0.33
PPM1F-210ENST00000623652 BICRAQ9NZM4 1560 aa12.94□□□□□ -0.34
PPM1F-210ENST00000623652 AMER1Q5JTC6 1135 aaPredicted RBP12.93□□□□□ -0.34
PPM1F-210ENST00000623652 WIZO95785 1651 aa12.93□□□□□ -0.34
PPM1F-210ENST00000623652 ANO8Q9HCE9 1232 aaPredicted RBP12.93□□□□□ -0.34
PPM1F-210ENST00000623652 MSH5O43196 834 aa12.91□□□□□ -0.34
PPM1F-210ENST00000623652 RUSC2Q8N2Y8 1516 aa12.91□□□□□ -0.34
PPM1F-210ENST00000623652 PABPN1Q86U42 306 aaKnown RBP eCLIP12.87□□□□□ -0.35
PPM1F-210ENST00000623652 TRIM52Q96A61 297 aa12.87□□□□□ -0.35
PPM1F-210ENST00000623652 DHX57Q6P158 1386 aaKnown RBP12.87□□□□□ -0.35
PPM1F-210ENST00000623652 GOLGA3Q08378 1498 aa12.85□□□□□ -0.35
PPM1F-210ENST00000623652 DDX10Q13206 875 aaKnown RBP12.84□□□□□ -0.35
PPM1F-210ENST00000623652 PODXL2Q9NZ53 605 aa12.83□□□□□ -0.35
PPM1F-210ENST00000623652 CLIP1P30622 1438 aa12.82□□□□□ -0.36
PPM1F-210ENST00000623652 TIMELESSQ9UNS1 1208 aa12.82□□□□□ -0.36
PPM1F-210ENST00000623652 EEA1Q15075 1411 aa12.81□□□□□ -0.36
PPM1F-210ENST00000623652 EIF4G1Q04637 1599 aaKnown RBP12.8□□□□□ -0.36
PPM1F-210ENST00000623652 VPS8Q8N3P4 1428 aa12.77□□□□□ -0.36
PPM1F-210ENST00000623652 CDK11AQ9UQ88 783 aaPredicted RBP12.77□□□□□ -0.37
PPM1F-210ENST00000623652 DEKP35659 375 aaKnown RBP12.76□□□□□ -0.37
PPM1F-210ENST00000623652 IRX6P78412 446 aaPredicted RBP12.76□□□□□ -0.37
PPM1F-210ENST00000623652 BAZ1AQ9NRL2 1556 aaPredicted RBP12.76□□□□□ -0.37
PPM1F-210ENST00000623652 FANCIQ9NVI1 1328 aa12.74□□□□□ -0.37
PPM1F-210ENST00000623652 HIRIP3Q9BW71 556 aaPredicted RBP12.73□□□□□ -0.37
PPM1F-210ENST00000623652 CCDC136Q96JN2 1154 aa12.72□□□□□ -0.37
PPM1F-210ENST00000623652 CEP164Q9UPV0 1460 aa12.7□□□□□ -0.38
PPM1F-210ENST00000623652 ANP32CO43423 234 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 331.9 ms