RNA–Protein interactions for RNA: ENST00000466678.5

ATP1B3-204, Transcript of ATPase Na+/K+ transporting subunit beta 3, humanhuman

TSL 3

Gene ATP1B3, Length 1,708 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP1B3-204ENST00000466678 NISCHQ9Y2I1 1504 aa31.95■■■□□ 2.71
ATP1B3-204ENST00000466678 CCDC180Q9P1Z9 1646 aa27.88■■■□□ 2.05
ATP1B3-204ENST00000466678 ZCCHC6Q5VYS8 1495 aaKnown RBP26.82■■□□□ 1.88
ATP1B3-204ENST00000466678 ABCC9O60706 1549 aa26.54■■□□□ 1.84
ATP1B3-204ENST00000466678 DCAF8L2P0C7V8 631 aa26.48■■□□□ 1.83
ATP1B3-204ENST00000466678 DCAF1Q9Y4B6 1507 aa26.42■■□□□ 1.82
ATP1B3-204ENST00000466678 MYO15BQ96JP2 1530 aa26.15■■□□□ 1.78
ATP1B3-204ENST00000466678 NACADO15069 1562 aa26.03■■□□□ 1.76
ATP1B3-204ENST00000466678 SHROOM4Q9ULL8 1493 aa26.01■■□□□ 1.75
ATP1B3-204ENST00000466678 RB1CC1Q8TDY2 1594 aa25.84■■□□□ 1.73
ATP1B3-204ENST00000466678 SCRIBQ14160 1630 aa25.66■■□□□ 1.7
ATP1B3-204ENST00000466678 UNC13AQ9UPW8 1703 aa25.19■■□□□ 1.62
ATP1B3-204ENST00000466678 BICRAQ9NZM4 1560 aa25.03■■□□□ 1.6
ATP1B3-204ENST00000466678 PABPN1Q86U42 306 aaKnown RBP eCLIP25.01■■□□□ 1.59
ATP1B3-204ENST00000466678 SUPT5HO00267 1087 aaKnown RBP24.97■■□□□ 1.59
ATP1B3-204ENST00000466678 CECR2Q9BXF3 1484 aa24.83■■□□□ 1.57
ATP1B3-204ENST00000466678 RSF1Q96T23 1441 aaPredicted RBP24.75■■□□□ 1.55
ATP1B3-204ENST00000466678 BAZ1AQ9NRL2 1556 aaPredicted RBP24.69■■□□□ 1.54
ATP1B3-204ENST00000466678 MROH2BQ7Z745 1585 aa24.68■■□□□ 1.54
ATP1B3-204ENST00000466678 SMARCA4P51532 1647 aa24.57■■□□□ 1.52
ATP1B3-204ENST00000466678 WIZO95785 1651 aa24.43■■□□□ 1.5
ATP1B3-204ENST00000466678 EIF4G1Q04637 1599 aaKnown RBP24.32■■□□□ 1.48
ATP1B3-204ENST00000466678 PEG3Q9GZU2 1588 aa24.27■■□□□ 1.48
ATP1B3-204ENST00000466678 ATAD2BQ9ULI0 1458 aa24.23■■□□□ 1.47
ATP1B3-204ENST00000466678 TOP2AP11388 1531 aaKnown RBP24.22■■□□□ 1.47
ATP1B3-204ENST00000466678 SMARCA2P51531 1590 aa24.22■■□□□ 1.47
ATP1B3-204ENST00000466678 BAZ1BQ9UIG0 1483 aaKnown RBP24.1■■□□□ 1.45
ATP1B3-204ENST00000466678 NCAPD3P42695 1498 aa24.04■■□□□ 1.44
ATP1B3-204ENST00000466678 HMGXB3Q12766 1538 aa23.99■■□□□ 1.43
ATP1B3-204ENST00000466678 CC2D2AQ9P2K1 1620 aa23.97■■□□□ 1.43
ATP1B3-204ENST00000466678 CCDC88BA6NC98 1476 aa23.97■■□□□ 1.43
ATP1B3-204ENST00000466678 CHIC1Q5VXU3 224 aa23.81■■□□□ 1.4
ATP1B3-204ENST00000466678 TRIM41Q8WV44 630 aa23.5■■□□□ 1.35
ATP1B3-204ENST00000466678 DNAJC5BQ9UF47 199 aa23.49■■□□□ 1.35
ATP1B3-204ENST00000466678 CFTRP13569 1480 aa23.47■■□□□ 1.35
ATP1B3-204ENST00000466678 CADPSQ9ULU8 1353 aa23.43■■□□□ 1.34
ATP1B3-204ENST00000466678 ABCC8Q09428 1581 aa23.41■■□□□ 1.34
ATP1B3-204ENST00000466678 WRNQ14191 1432 aaPredicted RBP eCLIP23.32■■□□□ 1.32
ATP1B3-204ENST00000466678 NESP48681 1621 aa23.24■■□□□ 1.31
ATP1B3-204ENST00000466678 PRDM2Q13029 1718 aa23.23■■□□□ 1.31
ATP1B3-204ENST00000466678 LAMC3Q9Y6N6 1575 aa23.23■■□□□ 1.31
ATP1B3-204ENST00000466678 SYNJ1O43426 1573 aa23.19■■□□□ 1.3
ATP1B3-204ENST00000466678 FANCD2Q9BXW9 1451 aa23.17■■□□□ 1.3
ATP1B3-204ENST00000466678 TOP2BQ02880 1626 aa23.1■■□□□ 1.29
ATP1B3-204ENST00000466678 PDS5BQ9NTI5 1447 aa23.09■■□□□ 1.29
ATP1B3-204ENST00000466678 CUX1P39880 1505 aa23.09■■□□□ 1.29
ATP1B3-204ENST00000466678 FAM9AQ8IZU1 332 aaPredicted RBP23.06■■□□□ 1.28
ATP1B3-204ENST00000466678 BIVM-ERCC5R4GMW8 1640 aa23.06■■□□□ 1.28
ATP1B3-204ENST00000466678 CEP164Q9UPV0 1460 aa23.05■■□□□ 1.28
ATP1B3-204ENST00000466678 SOGA1O94964 1423 aa22.97■■□□□ 1.27
ATP1B3-204ENST00000466678 DNMBPQ6XZF7 1577 aa22.92■■□□□ 1.26
ATP1B3-204ENST00000466678 EEA1Q15075 1411 aa22.92■■□□□ 1.26
ATP1B3-204ENST00000466678 KIF21AQ7Z4S6 1674 aa22.9■■□□□ 1.26
ATP1B3-204ENST00000466678 TOPBP1Q92547 1522 aa22.9■■□□□ 1.26
ATP1B3-204ENST00000466678 LOC105371045A0A1W2PR82 267 aa22.89■■□□□ 1.26
ATP1B3-204ENST00000466678 URB2Q14146 1524 aaKnown RBP22.87■■□□□ 1.25
ATP1B3-204ENST00000466678 FGD5Q6ZNL6 1462 aa22.87■■□□□ 1.25
ATP1B3-204ENST00000466678 RUSC2Q8N2Y8 1516 aa22.86■■□□□ 1.25
ATP1B3-204ENST00000466678 MRC2Q9UBG0 1479 aa22.8■■□□□ 1.24
ATP1B3-204ENST00000466678 CSRNP3Q8WYN3 585 aa22.8■■□□□ 1.24
ATP1B3-204ENST00000466678 ERCC6Q03468 1493 aa22.8■■□□□ 1.24
ATP1B3-204ENST00000466678 POLA1P09884 1462 aaPredicted RBP22.78■■□□□ 1.24
ATP1B3-204ENST00000466678 KIF27Q86VH2 1401 aa22.75■■□□□ 1.23
ATP1B3-204ENST00000466678 EHMT2Q96KQ7 1210 aa22.74■■□□□ 1.23
ATP1B3-204ENST00000466678 CUX2O14529 1486 aa22.72■■□□□ 1.23
ATP1B3-204ENST00000466678 RAD54L2Q9Y4B4 1467 aa22.7■■□□□ 1.22
ATP1B3-204ENST00000466678 WDR62O43379 1518 aa22.66■■□□□ 1.22
ATP1B3-204ENST00000466678 ABCA10Q8WWZ4 1543 aa22.66■■□□□ 1.22
ATP1B3-204ENST00000466678 GOLGA3Q08378 1498 aa22.6■■□□□ 1.21
ATP1B3-204ENST00000466678 THOC2Q8NI27 1593 aaKnown RBP22.6■■□□□ 1.21
ATP1B3-204ENST00000466678 KIF21BO75037 1637 aa22.59■■□□□ 1.21
ATP1B3-204ENST00000466678 IGF1RP08069 1367 aa22.54■■□□□ 1.2
ATP1B3-204ENST00000466678 PRXQ9BXM0 1461 aa22.54■■□□□ 1.2
ATP1B3-204ENST00000466678 WDR97A6NE52 1622 aa22.54■■□□□ 1.2
ATP1B3-204ENST00000466678 TARBP1Q13395 1621 aaKnown RBP22.52■■□□□ 1.2
ATP1B3-204ENST00000466678 UBTFP17480 764 aaKnown RBP22.52■■□□□ 1.2
ATP1B3-204ENST00000466678 RAPGEF2Q9Y4G8 1499 aa22.51■■□□□ 1.19
ATP1B3-204ENST00000466678 TDRD9Q8NDG6 1382 aaKnown RBP22.51■■□□□ 1.19
ATP1B3-204ENST00000466678 IFT140Q96RY7 1462 aa22.5■■□□□ 1.19
ATP1B3-204ENST00000466678 TNIKQ9UKE5 1360 aa22.49■■□□□ 1.19
ATP1B3-204ENST00000466678 ERICH3Q5RHP9 1530 aa22.48■■□□□ 1.19
ATP1B3-204ENST00000466678 GAPVD1Q14C86 1478 aa22.46■■□□□ 1.19
ATP1B3-204ENST00000466678 ABCA5Q8WWZ7 1642 aa22.46■■□□□ 1.19
ATP1B3-204ENST00000466678 CARMIL1Q5VZK9 1371 aa22.44■■□□□ 1.18
ATP1B3-204ENST00000466678 CEP162Q5TB80 1403 aa22.38■■□□□ 1.17
ATP1B3-204ENST00000466678 AQRO60306 1485 aaKnown RBP eCLIP22.37■■□□□ 1.175e-8■□□□□ 10.1
ATP1B3-204ENST00000466678 ZNF608Q9ULD9 1512 aaPredicted RBP22.36■■□□□ 1.17
ATP1B3-204ENST00000466678 CUL7Q14999 1698 aa22.35■■□□□ 1.17
ATP1B3-204ENST00000466678 GRIN2BQ13224 1484 aa22.31■■□□□ 1.16
ATP1B3-204ENST00000466678 EIF4G3O43432 1585 aaKnown RBP22.27■■□□□ 1.16
ATP1B3-204ENST00000466678 PBRM1Q86U86 1689 aa22.27■■□□□ 1.16
ATP1B3-204ENST00000466678 CLIP1P30622 1438 aa22.24■■□□□ 1.15
ATP1B3-204ENST00000466678 FHAD1B1AJZ9 1412 aa22.23■■□□□ 1.15
ATP1B3-204ENST00000466678 ADAMTS12P58397 1594 aa22.2■■□□□ 1.14
ATP1B3-204ENST00000466678 RANGAP1P46060 587 aaPredicted RBP22.2■■□□□ 1.14
ATP1B3-204ENST00000466678 SNAPC4Q5SXM2 1469 aa22.18■■□□□ 1.14
ATP1B3-204ENST00000466678 MAGI1Q96QZ7 1491 aaPredicted RBP22.13■■□□□ 1.13
ATP1B3-204ENST00000466678 SYNJ2O15056 1496 aa22.05■■□□□ 1.12
ATP1B3-204ENST00000466678 CTTNBP2Q8WZ74 1663 aa22.04■■□□□ 1.12
ATP1B3-204ENST00000466678 GRIN2AQ12879 1464 aa22.03■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 239.6 ms