Protein–RNA interactions for Protein: Q9H0A8

COMMD4, COMM domain-containing protein 4, humanhuman

Predictions only

Length 199 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4Q9H0A8 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC22.51■■□□□ 1.19
COMMD4Q9H0A8 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
COMMD4Q9H0A8 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
COMMD4Q9H0A8 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC22.51■■□□□ 1.19
COMMD4Q9H0A8 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC22.5■■□□□ 1.19
COMMD4Q9H0A8 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC22.5■■□□□ 1.19
COMMD4Q9H0A8 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
COMMD4Q9H0A8 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
COMMD4Q9H0A8 AC127502.1-201ENST00000399971 1502 ntBASIC22.49■■□□□ 1.19
COMMD4Q9H0A8 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC22.49■■□□□ 1.19
COMMD4Q9H0A8 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC22.48■■□□□ 1.19
COMMD4Q9H0A8 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC22.48■■□□□ 1.19
COMMD4Q9H0A8 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
COMMD4Q9H0A8 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC22.48■■□□□ 1.19
COMMD4Q9H0A8 DENR-202ENST00000455982 1052 ntTSL 5 BASIC22.48■■□□□ 1.19
COMMD4Q9H0A8 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
COMMD4Q9H0A8 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC22.48■■□□□ 1.19
COMMD4Q9H0A8 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
COMMD4Q9H0A8 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC22.47■■□□□ 1.19
COMMD4Q9H0A8 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
COMMD4Q9H0A8 SHF-208ENST00000560734 1731 ntTSL 3 BASIC22.47■■□□□ 1.19
COMMD4Q9H0A8 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
COMMD4Q9H0A8 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
COMMD4Q9H0A8 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
COMMD4Q9H0A8 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
COMMD4Q9H0A8 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC22.45■■□□□ 1.19
COMMD4Q9H0A8 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC22.45■■□□□ 1.19
COMMD4Q9H0A8 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC22.45■■□□□ 1.18
COMMD4Q9H0A8 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC22.44■■□□□ 1.18
COMMD4Q9H0A8 EBPL-202ENST00000378268 680 ntTSL 3 BASIC22.44■■□□□ 1.18
COMMD4Q9H0A8 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
COMMD4Q9H0A8 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
COMMD4Q9H0A8 LINC01003-201ENST00000564834 1764 ntBASIC22.43■■□□□ 1.18
COMMD4Q9H0A8 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC22.42■■□□□ 1.18
COMMD4Q9H0A8 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC22.42■■□□□ 1.18
COMMD4Q9H0A8 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC22.41■■□□□ 1.18
COMMD4Q9H0A8 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC22.41■■□□□ 1.18
COMMD4Q9H0A8 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
COMMD4Q9H0A8 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC22.41■■□□□ 1.18
COMMD4Q9H0A8 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC22.41■■□□□ 1.18
COMMD4Q9H0A8 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC22.41■■□□□ 1.18
COMMD4Q9H0A8 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC22.41■■□□□ 1.18
COMMD4Q9H0A8 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
COMMD4Q9H0A8 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
COMMD4Q9H0A8 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC22.4■■□□□ 1.18
COMMD4Q9H0A8 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC22.4■■□□□ 1.18
COMMD4Q9H0A8 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC22.4■■□□□ 1.18
COMMD4Q9H0A8 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
COMMD4Q9H0A8 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
COMMD4Q9H0A8 AL391121.1-201ENST00000607967 1349 ntBASIC22.38■■□□□ 1.17
COMMD4Q9H0A8 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC22.38■■□□□ 1.17
COMMD4Q9H0A8 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC22.38■■□□□ 1.17
COMMD4Q9H0A8 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC22.38■■□□□ 1.17
COMMD4Q9H0A8 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC22.38■■□□□ 1.17
COMMD4Q9H0A8 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
COMMD4Q9H0A8 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC22.37■■□□□ 1.17
COMMD4Q9H0A8 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
COMMD4Q9H0A8 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
COMMD4Q9H0A8 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
COMMD4Q9H0A8 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
COMMD4Q9H0A8 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
COMMD4Q9H0A8 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC22.36■■□□□ 1.17
COMMD4Q9H0A8 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
COMMD4Q9H0A8 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
COMMD4Q9H0A8 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC22.35■■□□□ 1.17
COMMD4Q9H0A8 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC22.35■■□□□ 1.17
COMMD4Q9H0A8 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
COMMD4Q9H0A8 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC22.34■■□□□ 1.17
COMMD4Q9H0A8 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC22.34■■□□□ 1.17
COMMD4Q9H0A8 AC100797.4-201ENST00000631653 1827 ntBASIC22.34■■□□□ 1.17
COMMD4Q9H0A8 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC22.33■■□□□ 1.17
COMMD4Q9H0A8 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
COMMD4Q9H0A8 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
COMMD4Q9H0A8 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
COMMD4Q9H0A8 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC22.32■■□□□ 1.16
COMMD4Q9H0A8 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
COMMD4Q9H0A8 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
COMMD4Q9H0A8 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
COMMD4Q9H0A8 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
COMMD4Q9H0A8 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
COMMD4Q9H0A8 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
COMMD4Q9H0A8 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
COMMD4Q9H0A8 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
COMMD4Q9H0A8 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC22.3■■□□□ 1.16
COMMD4Q9H0A8 SHF-207ENST00000560540 2062 ntTSL 5 BASIC22.3■■□□□ 1.16
COMMD4Q9H0A8 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC22.3■■□□□ 1.16
COMMD4Q9H0A8 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
COMMD4Q9H0A8 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
COMMD4Q9H0A8 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC22.29■■□□□ 1.16
COMMD4Q9H0A8 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
COMMD4Q9H0A8 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC22.28■■□□□ 1.16
COMMD4Q9H0A8 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC22.28■■□□□ 1.16
COMMD4Q9H0A8 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
COMMD4Q9H0A8 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
COMMD4Q9H0A8 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC22.28■■□□□ 1.16
COMMD4Q9H0A8 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
COMMD4Q9H0A8 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
COMMD4Q9H0A8 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
COMMD4Q9H0A8 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC22.27■■□□□ 1.16
COMMD4Q9H0A8 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms