Protein–RNA interactions for Protein: Q9H0A8

COMMD4, COMM domain-containing protein 4, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4Q9H0A8 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC22.51■■□□□ 1.19
COMMD4Q9H0A8 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
COMMD4Q9H0A8 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
COMMD4Q9H0A8 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC22.51■■□□□ 1.19
COMMD4Q9H0A8 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC22.5■■□□□ 1.19
COMMD4Q9H0A8 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC22.5■■□□□ 1.19
COMMD4Q9H0A8 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
COMMD4Q9H0A8 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
COMMD4Q9H0A8 AC127502.1-201ENST00000399971 1502 ntBASIC22.49■■□□□ 1.19
COMMD4Q9H0A8 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC22.49■■□□□ 1.19
COMMD4Q9H0A8 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC22.48■■□□□ 1.19
COMMD4Q9H0A8 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC22.48■■□□□ 1.19
COMMD4Q9H0A8 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
COMMD4Q9H0A8 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC22.48■■□□□ 1.19
COMMD4Q9H0A8 DENR-202ENST00000455982 1052 ntTSL 5 BASIC22.48■■□□□ 1.19
COMMD4Q9H0A8 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
COMMD4Q9H0A8 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC22.48■■□□□ 1.19
COMMD4Q9H0A8 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
COMMD4Q9H0A8 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC22.47■■□□□ 1.19
COMMD4Q9H0A8 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
COMMD4Q9H0A8 SHF-208ENST00000560734 1731 ntTSL 3 BASIC22.47■■□□□ 1.19
COMMD4Q9H0A8 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
COMMD4Q9H0A8 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
COMMD4Q9H0A8 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
COMMD4Q9H0A8 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
COMMD4Q9H0A8 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC22.45■■□□□ 1.19
COMMD4Q9H0A8 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC22.45■■□□□ 1.19
COMMD4Q9H0A8 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC22.45■■□□□ 1.18
COMMD4Q9H0A8 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC22.44■■□□□ 1.18
COMMD4Q9H0A8 EBPL-202ENST00000378268 680 ntTSL 3 BASIC22.44■■□□□ 1.18
COMMD4Q9H0A8 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
COMMD4Q9H0A8 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
COMMD4Q9H0A8 LINC01003-201ENST00000564834 1764 ntBASIC22.43■■□□□ 1.18
COMMD4Q9H0A8 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC22.42■■□□□ 1.18
COMMD4Q9H0A8 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC22.42■■□□□ 1.18
COMMD4Q9H0A8 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC22.41■■□□□ 1.18
COMMD4Q9H0A8 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC22.41■■□□□ 1.18
COMMD4Q9H0A8 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
COMMD4Q9H0A8 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC22.41■■□□□ 1.18
COMMD4Q9H0A8 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC22.41■■□□□ 1.18
COMMD4Q9H0A8 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC22.41■■□□□ 1.18
COMMD4Q9H0A8 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC22.41■■□□□ 1.18
COMMD4Q9H0A8 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
COMMD4Q9H0A8 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
COMMD4Q9H0A8 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC22.4■■□□□ 1.18
COMMD4Q9H0A8 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC22.4■■□□□ 1.18
COMMD4Q9H0A8 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC22.4■■□□□ 1.18
COMMD4Q9H0A8 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
COMMD4Q9H0A8 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
COMMD4Q9H0A8 AL391121.1-201ENST00000607967 1349 ntBASIC22.38■■□□□ 1.17
COMMD4Q9H0A8 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC22.38■■□□□ 1.17
COMMD4Q9H0A8 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC22.38■■□□□ 1.17
COMMD4Q9H0A8 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC22.38■■□□□ 1.17
COMMD4Q9H0A8 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC22.38■■□□□ 1.17
COMMD4Q9H0A8 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
COMMD4Q9H0A8 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC22.37■■□□□ 1.17
COMMD4Q9H0A8 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
COMMD4Q9H0A8 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
COMMD4Q9H0A8 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
COMMD4Q9H0A8 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
COMMD4Q9H0A8 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
COMMD4Q9H0A8 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC22.36■■□□□ 1.17
COMMD4Q9H0A8 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
COMMD4Q9H0A8 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
COMMD4Q9H0A8 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC22.35■■□□□ 1.17
COMMD4Q9H0A8 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC22.35■■□□□ 1.17
COMMD4Q9H0A8 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
COMMD4Q9H0A8 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC22.34■■□□□ 1.17
COMMD4Q9H0A8 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC22.34■■□□□ 1.17
COMMD4Q9H0A8 AC100797.4-201ENST00000631653 1827 ntBASIC22.34■■□□□ 1.17
COMMD4Q9H0A8 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC22.33■■□□□ 1.17
COMMD4Q9H0A8 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
COMMD4Q9H0A8 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
COMMD4Q9H0A8 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
COMMD4Q9H0A8 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC22.32■■□□□ 1.16
COMMD4Q9H0A8 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
COMMD4Q9H0A8 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
COMMD4Q9H0A8 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
COMMD4Q9H0A8 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
COMMD4Q9H0A8 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
COMMD4Q9H0A8 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
COMMD4Q9H0A8 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
COMMD4Q9H0A8 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
COMMD4Q9H0A8 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC22.3■■□□□ 1.16
COMMD4Q9H0A8 SHF-207ENST00000560540 2062 ntTSL 5 BASIC22.3■■□□□ 1.16
COMMD4Q9H0A8 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC22.3■■□□□ 1.16
COMMD4Q9H0A8 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
COMMD4Q9H0A8 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
COMMD4Q9H0A8 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC22.29■■□□□ 1.16
COMMD4Q9H0A8 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
COMMD4Q9H0A8 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC22.28■■□□□ 1.16
COMMD4Q9H0A8 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC22.28■■□□□ 1.16
COMMD4Q9H0A8 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
COMMD4Q9H0A8 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
COMMD4Q9H0A8 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC22.28■■□□□ 1.16
COMMD4Q9H0A8 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
COMMD4Q9H0A8 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
COMMD4Q9H0A8 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
COMMD4Q9H0A8 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC22.27■■□□□ 1.16
COMMD4Q9H0A8 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms