Protein–RNA interactions for Protein: Q9H089

LSG1, Large subunit GTPase 1 homolog, humanhuman

Known RBP Predictions only

Length 658 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSG1Q9H089 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
LSG1Q9H089 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC30.86■■■□□ 2.53
LSG1Q9H089 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC30.86■■■□□ 2.53
LSG1Q9H089 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
LSG1Q9H089 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC30.85■■■□□ 2.53
LSG1Q9H089 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC30.85■■■□□ 2.53
LSG1Q9H089 AC135983.2-203ENST00000454486 1613 ntBASIC30.85■■■□□ 2.53
LSG1Q9H089 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
LSG1Q9H089 EI24-212ENST00000615917 1407 ntTSL 2 BASIC30.84■■■□□ 2.53
LSG1Q9H089 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC30.84■■■□□ 2.53
LSG1Q9H089 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC30.84■■■□□ 2.53
LSG1Q9H089 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC30.84■■■□□ 2.53
LSG1Q9H089 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC30.83■■■□□ 2.53
LSG1Q9H089 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC30.83■■■□□ 2.53
LSG1Q9H089 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC30.83■■■□□ 2.53
LSG1Q9H089 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC30.82■■■□□ 2.53
LSG1Q9H089 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC30.81■■■□□ 2.52
LSG1Q9H089 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC30.81■■■□□ 2.52
LSG1Q9H089 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC30.81■■■□□ 2.52
LSG1Q9H089 WHAMMP2-203ENST00000563942 1603 ntBASIC30.8■■■□□ 2.52
LSG1Q9H089 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC30.8■■■□□ 2.52
LSG1Q9H089 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
LSG1Q9H089 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
LSG1Q9H089 LINC00273-201ENST00000539813 1452 ntBASIC30.79■■■□□ 2.52
LSG1Q9H089 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC30.79■■■□□ 2.52
LSG1Q9H089 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
LSG1Q9H089 AC044849.2-201ENST00000606596 710 ntBASIC30.78■■■□□ 2.52
LSG1Q9H089 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC30.78■■■□□ 2.52
LSG1Q9H089 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC30.77■■■□□ 2.52
LSG1Q9H089 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC30.77■■■□□ 2.52
LSG1Q9H089 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
LSG1Q9H089 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC30.77■■■□□ 2.52
LSG1Q9H089 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC30.77■■■□□ 2.52
LSG1Q9H089 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC30.76■■■□□ 2.52
LSG1Q9H089 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.52
LSG1Q9H089 PROC-203ENST00000409048 1586 ntTSL 5 BASIC30.76■■■□□ 2.52
LSG1Q9H089 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.51
LSG1Q9H089 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.51
LSG1Q9H089 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC30.75■■■□□ 2.51
LSG1Q9H089 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC30.75■■■□□ 2.51
LSG1Q9H089 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
LSG1Q9H089 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC30.74■■■□□ 2.51
LSG1Q9H089 CIB2-204ENST00000557846 934 ntTSL 3 BASIC30.73■■■□□ 2.51
LSG1Q9H089 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC30.73■■■□□ 2.51
LSG1Q9H089 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC30.73■■■□□ 2.51
LSG1Q9H089 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC30.73■■■□□ 2.51
LSG1Q9H089 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
LSG1Q9H089 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC30.72■■■□□ 2.51
LSG1Q9H089 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC30.72■■■□□ 2.51
LSG1Q9H089 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
LSG1Q9H089 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
LSG1Q9H089 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
LSG1Q9H089 MEST-211ENST00000437945 1455 ntTSL 5 BASIC30.7■■■□□ 2.51
LSG1Q9H089 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.51
LSG1Q9H089 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.5
LSG1Q9H089 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC30.69■■■□□ 2.5
LSG1Q9H089 RPS2P35-201ENST00000443417 897 ntBASIC30.69■■■□□ 2.5
LSG1Q9H089 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC30.69■■■□□ 2.5
LSG1Q9H089 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC30.69■■■□□ 2.5
LSG1Q9H089 CALM3-209ENST00000597743 577 ntTSL 4 BASIC30.68■■■□□ 2.5
LSG1Q9H089 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
LSG1Q9H089 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC30.68■■■□□ 2.5
LSG1Q9H089 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
LSG1Q9H089 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC30.67■■■□□ 2.5
LSG1Q9H089 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC30.66■■■□□ 2.5
LSG1Q9H089 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
LSG1Q9H089 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC30.66■■■□□ 2.5
LSG1Q9H089 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC30.66■■■□□ 2.5
LSG1Q9H089 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
LSG1Q9H089 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
LSG1Q9H089 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC30.64■■■□□ 2.5
LSG1Q9H089 BOD1-206ENST00000480951 814 ntTSL 2 BASIC30.64■■■□□ 2.5
LSG1Q9H089 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC30.64■■■□□ 2.5
LSG1Q9H089 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
LSG1Q9H089 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC30.62■■■□□ 2.49
LSG1Q9H089 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC30.62■■■□□ 2.49
LSG1Q9H089 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC30.62■■■□□ 2.49
LSG1Q9H089 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
LSG1Q9H089 AC021231.2-201ENST00000594613 730 ntBASIC30.61■■■□□ 2.49
LSG1Q9H089 AP002414.2-202ENST00000590929 1450 ntBASIC30.61■■■□□ 2.49
LSG1Q9H089 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC30.61■■■□□ 2.49
LSG1Q9H089 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC30.6■■■□□ 2.49
LSG1Q9H089 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
LSG1Q9H089 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC30.6■■■□□ 2.49
LSG1Q9H089 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
LSG1Q9H089 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC30.59■■■□□ 2.49
LSG1Q9H089 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC30.58■■■□□ 2.49
LSG1Q9H089 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
LSG1Q9H089 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC30.58■■■□□ 2.49
LSG1Q9H089 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
LSG1Q9H089 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC30.57■■■□□ 2.48
LSG1Q9H089 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC30.57■■■□□ 2.48
LSG1Q9H089 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
LSG1Q9H089 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC30.56■■■□□ 2.48
LSG1Q9H089 BX255925.1-201ENST00000566954 1854 ntBASIC30.56■■■□□ 2.48
LSG1Q9H089 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
LSG1Q9H089 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
LSG1Q9H089 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC30.55■■■□□ 2.48
LSG1Q9H089 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC30.55■■■□□ 2.48
LSG1Q9H089 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC30.54■■■□□ 2.48
Retrieved 100 of 98,524 protein–RNA pairs in 77.7 ms