Protein–RNA interactions for Protein: Q96TA0

PCDHB18P, Putative protocadherin beta-18, humanhuman

Predictions only

Length 734 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB18PQ96TA0 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC27.35■■□□□ 1.97
PCDHB18PQ96TA0 AL162393.1-201ENST00000437852 946 ntBASIC27.35■■□□□ 1.97
PCDHB18PQ96TA0 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC27.35■■□□□ 1.97
PCDHB18PQ96TA0 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
PCDHB18PQ96TA0 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
PCDHB18PQ96TA0 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC27.35■■□□□ 1.97
PCDHB18PQ96TA0 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC27.34■■□□□ 1.97
PCDHB18PQ96TA0 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
PCDHB18PQ96TA0 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC27.34■■□□□ 1.97
PCDHB18PQ96TA0 AC087741.3-201ENST00000624270 1347 ntBASIC27.34■■□□□ 1.97
PCDHB18PQ96TA0 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC27.34■■□□□ 1.97
PCDHB18PQ96TA0 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC27.33■■□□□ 1.97
PCDHB18PQ96TA0 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
PCDHB18PQ96TA0 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
PCDHB18PQ96TA0 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC27.33■■□□□ 1.97
PCDHB18PQ96TA0 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
PCDHB18PQ96TA0 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC27.31■■□□□ 1.96
PCDHB18PQ96TA0 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC27.3■■□□□ 1.96
PCDHB18PQ96TA0 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC27.3■■□□□ 1.96
PCDHB18PQ96TA0 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
PCDHB18PQ96TA0 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
PCDHB18PQ96TA0 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
PCDHB18PQ96TA0 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
PCDHB18PQ96TA0 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
PCDHB18PQ96TA0 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
PCDHB18PQ96TA0 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
PCDHB18PQ96TA0 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC27.28■■□□□ 1.96
PCDHB18PQ96TA0 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC27.28■■□□□ 1.96
PCDHB18PQ96TA0 AC135983.2-203ENST00000454486 1613 ntBASIC27.27■■□□□ 1.96
PCDHB18PQ96TA0 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
PCDHB18PQ96TA0 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
PCDHB18PQ96TA0 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC27.26■■□□□ 1.95
PCDHB18PQ96TA0 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
PCDHB18PQ96TA0 PROC-203ENST00000409048 1586 ntTSL 5 BASIC27.26■■□□□ 1.95
PCDHB18PQ96TA0 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC27.25■■□□□ 1.95
PCDHB18PQ96TA0 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC27.25■■□□□ 1.95
PCDHB18PQ96TA0 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
PCDHB18PQ96TA0 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC27.25■■□□□ 1.95
PCDHB18PQ96TA0 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC27.25■■□□□ 1.95
PCDHB18PQ96TA0 EI24-212ENST00000615917 1407 ntTSL 2 BASIC27.24■■□□□ 1.95
PCDHB18PQ96TA0 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
PCDHB18PQ96TA0 WHAMMP2-203ENST00000563942 1603 ntBASIC27.24■■□□□ 1.95
PCDHB18PQ96TA0 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
PCDHB18PQ96TA0 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC27.23■■□□□ 1.95
PCDHB18PQ96TA0 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC27.23■■□□□ 1.95
PCDHB18PQ96TA0 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
PCDHB18PQ96TA0 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC27.22■■□□□ 1.95
PCDHB18PQ96TA0 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
PCDHB18PQ96TA0 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC27.22■■□□□ 1.95
PCDHB18PQ96TA0 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
PCDHB18PQ96TA0 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC27.22■■□□□ 1.95
PCDHB18PQ96TA0 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC27.21■■□□□ 1.95
PCDHB18PQ96TA0 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC27.21■■□□□ 1.95
PCDHB18PQ96TA0 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC27.21■■□□□ 1.95
PCDHB18PQ96TA0 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
PCDHB18PQ96TA0 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC27.2■■□□□ 1.95
PCDHB18PQ96TA0 LINC00273-201ENST00000539813 1452 ntBASIC27.2■■□□□ 1.95
PCDHB18PQ96TA0 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC27.2■■□□□ 1.94
PCDHB18PQ96TA0 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC27.19■■□□□ 1.94
PCDHB18PQ96TA0 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
PCDHB18PQ96TA0 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC27.17■■□□□ 1.94
PCDHB18PQ96TA0 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
PCDHB18PQ96TA0 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
PCDHB18PQ96TA0 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC27.16■■□□□ 1.94
PCDHB18PQ96TA0 MEST-211ENST00000437945 1455 ntTSL 5 BASIC27.16■■□□□ 1.94
PCDHB18PQ96TA0 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
PCDHB18PQ96TA0 CIB2-204ENST00000557846 934 ntTSL 3 BASIC27.15■■□□□ 1.94
PCDHB18PQ96TA0 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
PCDHB18PQ96TA0 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC27.14■■□□□ 1.94
PCDHB18PQ96TA0 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC27.13■■□□□ 1.93
PCDHB18PQ96TA0 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
PCDHB18PQ96TA0 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC27.13■■□□□ 1.93
PCDHB18PQ96TA0 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
PCDHB18PQ96TA0 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
PCDHB18PQ96TA0 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
PCDHB18PQ96TA0 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
PCDHB18PQ96TA0 AC044849.2-201ENST00000606596 710 ntBASIC27.12■■□□□ 1.93
PCDHB18PQ96TA0 BX255925.1-201ENST00000566954 1854 ntBASIC27.12■■□□□ 1.93
PCDHB18PQ96TA0 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC27.11■■□□□ 1.93
PCDHB18PQ96TA0 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
PCDHB18PQ96TA0 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
PCDHB18PQ96TA0 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC27.11■■□□□ 1.93
PCDHB18PQ96TA0 AP002414.2-202ENST00000590929 1450 ntBASIC27.11■■□□□ 1.93
PCDHB18PQ96TA0 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
PCDHB18PQ96TA0 CALM3-209ENST00000597743 577 ntTSL 4 BASIC27.1■■□□□ 1.93
PCDHB18PQ96TA0 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC27.1■■□□□ 1.93
PCDHB18PQ96TA0 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC27.09■■□□□ 1.93
PCDHB18PQ96TA0 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC27.09■■□□□ 1.93
PCDHB18PQ96TA0 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC27.08■■□□□ 1.93
PCDHB18PQ96TA0 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC27.08■■□□□ 1.93
PCDHB18PQ96TA0 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC27.08■■□□□ 1.93
PCDHB18PQ96TA0 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC27.08■■□□□ 1.93
PCDHB18PQ96TA0 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC27.08■■□□□ 1.93
PCDHB18PQ96TA0 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC27.08■■□□□ 1.93
PCDHB18PQ96TA0 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC27.08■■□□□ 1.92
PCDHB18PQ96TA0 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC27.07■■□□□ 1.92
PCDHB18PQ96TA0 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
PCDHB18PQ96TA0 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC27.07■■□□□ 1.92
PCDHB18PQ96TA0 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
PCDHB18PQ96TA0 LINC01003-201ENST00000564834 1764 ntBASIC27.07■■□□□ 1.92
Retrieved 100 of 98,524 protein–RNA pairs in 165.5 ms