Protein–RNA interactions for Protein: Q96TA0

PCDHB18P, Putative protocadherin beta-18, humanhuman

Predictions only

Length 734 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB18PQ96TA0 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC36.02■■■■□ 3.36
PCDHB18PQ96TA0 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC35.93■■■■□ 3.34
PCDHB18PQ96TA0 AL356512.1-201ENST00000607453 1739 ntBASIC35.35■■■■□ 3.25
PCDHB18PQ96TA0 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC35.2■■■■□ 3.23
PCDHB18PQ96TA0 HES6-203ENST00000409160 1600 ntTSL 2 BASIC35.05■■■■□ 3.2
PCDHB18PQ96TA0 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC35.01■■■■□ 3.19
PCDHB18PQ96TA0 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC34.87■■■■□ 3.17
PCDHB18PQ96TA0 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC34.81■■■■□ 3.16
PCDHB18PQ96TA0 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC34.75■■■■□ 3.15
PCDHB18PQ96TA0 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC34.39■■■■□ 3.1
PCDHB18PQ96TA0 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC34.32■■■■□ 3.08
PCDHB18PQ96TA0 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC34.26■■■■□ 3.08
PCDHB18PQ96TA0 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC34.05■■■■□ 3.04
PCDHB18PQ96TA0 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC33.89■■■■□ 3.02
PCDHB18PQ96TA0 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC33.66■■■□□ 2.98
PCDHB18PQ96TA0 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC33.54■■■□□ 2.96
PCDHB18PQ96TA0 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC33.53■■■□□ 2.96
PCDHB18PQ96TA0 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC33.49■■■□□ 2.95
PCDHB18PQ96TA0 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC33.48■■■□□ 2.95
PCDHB18PQ96TA0 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC33.32■■■□□ 2.92
PCDHB18PQ96TA0 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC33.25■■■□□ 2.91
PCDHB18PQ96TA0 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC33.2■■■□□ 2.91
PCDHB18PQ96TA0 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC33.07■■■□□ 2.88
PCDHB18PQ96TA0 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC33.07■■■□□ 2.88
PCDHB18PQ96TA0 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC33.05■■■□□ 2.88
PCDHB18PQ96TA0 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC33.01■■■□□ 2.87
PCDHB18PQ96TA0 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC32.93■■■□□ 2.86
PCDHB18PQ96TA0 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC32.9■■■□□ 2.86
PCDHB18PQ96TA0 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC32.83■■■□□ 2.85
PCDHB18PQ96TA0 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC32.82■■■□□ 2.85
PCDHB18PQ96TA0 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC32.81■■■□□ 2.84
PCDHB18PQ96TA0 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC32.8■■■□□ 2.84
PCDHB18PQ96TA0 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC32.72■■■□□ 2.83
PCDHB18PQ96TA0 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC32.7■■■□□ 2.83
PCDHB18PQ96TA0 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC32.67■■■□□ 2.82
PCDHB18PQ96TA0 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC32.62■■■□□ 2.81
PCDHB18PQ96TA0 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC32.53■■■□□ 2.8
PCDHB18PQ96TA0 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC32.46■■■□□ 2.79
PCDHB18PQ96TA0 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC32.45■■■□□ 2.79
PCDHB18PQ96TA0 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC32.35■■■□□ 2.77
PCDHB18PQ96TA0 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC32.27■■■□□ 2.76
PCDHB18PQ96TA0 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC32.24■■■□□ 2.75
PCDHB18PQ96TA0 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC32.21■■■□□ 2.75
PCDHB18PQ96TA0 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC32.06■■■□□ 2.72
PCDHB18PQ96TA0 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC32.05■■■□□ 2.72
PCDHB18PQ96TA0 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC32.01■■■□□ 2.71
PCDHB18PQ96TA0 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC31.97■■■□□ 2.71
PCDHB18PQ96TA0 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC31.93■■■□□ 2.7
PCDHB18PQ96TA0 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
PCDHB18PQ96TA0 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC31.85■■■□□ 2.69
PCDHB18PQ96TA0 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
PCDHB18PQ96TA0 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
PCDHB18PQ96TA0 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC31.79■■■□□ 2.68
PCDHB18PQ96TA0 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC31.79■■■□□ 2.68
PCDHB18PQ96TA0 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
PCDHB18PQ96TA0 ILK-212ENST00000532063 1617 ntTSL 2 BASIC31.76■■■□□ 2.67
PCDHB18PQ96TA0 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
PCDHB18PQ96TA0 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
PCDHB18PQ96TA0 INO80B-203ENST00000409917 796 ntTSL 2 BASIC31.64■■■□□ 2.66
PCDHB18PQ96TA0 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC31.57■■■□□ 2.64
PCDHB18PQ96TA0 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC31.56■■■□□ 2.64
PCDHB18PQ96TA0 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC31.56■■■□□ 2.64
PCDHB18PQ96TA0 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
PCDHB18PQ96TA0 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC31.52■■■□□ 2.64
PCDHB18PQ96TA0 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC31.51■■■□□ 2.63
PCDHB18PQ96TA0 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC31.49■■■□□ 2.63
PCDHB18PQ96TA0 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC31.47■■■□□ 2.63
PCDHB18PQ96TA0 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC31.47■■■□□ 2.63
PCDHB18PQ96TA0 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
PCDHB18PQ96TA0 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
PCDHB18PQ96TA0 AC015813.7-201ENST00000623294 581 ntBASIC31.32■■■□□ 2.6
PCDHB18PQ96TA0 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
PCDHB18PQ96TA0 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC31.23■■■□□ 2.59
PCDHB18PQ96TA0 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC31.22■■■□□ 2.59
PCDHB18PQ96TA0 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC31.21■■■□□ 2.59
PCDHB18PQ96TA0 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC31.2■■■□□ 2.58
PCDHB18PQ96TA0 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC31.19■■■□□ 2.58
PCDHB18PQ96TA0 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC31.18■■■□□ 2.58
PCDHB18PQ96TA0 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC31.12■■■□□ 2.57
PCDHB18PQ96TA0 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC31.09■■■□□ 2.57
PCDHB18PQ96TA0 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC31.08■■■□□ 2.57
PCDHB18PQ96TA0 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC31.07■■■□□ 2.56
PCDHB18PQ96TA0 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC31.05■■■□□ 2.56
PCDHB18PQ96TA0 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC31■■■□□ 2.55
PCDHB18PQ96TA0 AC145285.7-201ENST00000614819 1539 ntBASIC30.97■■■□□ 2.55
PCDHB18PQ96TA0 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
PCDHB18PQ96TA0 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
PCDHB18PQ96TA0 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
PCDHB18PQ96TA0 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC30.86■■■□□ 2.53
PCDHB18PQ96TA0 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
PCDHB18PQ96TA0 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC30.84■■■□□ 2.53
PCDHB18PQ96TA0 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
PCDHB18PQ96TA0 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC30.83■■■□□ 2.53
PCDHB18PQ96TA0 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC30.83■■■□□ 2.53
PCDHB18PQ96TA0 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
PCDHB18PQ96TA0 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC30.81■■■□□ 2.52
PCDHB18PQ96TA0 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC30.79■■■□□ 2.52
PCDHB18PQ96TA0 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.51
PCDHB18PQ96TA0 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
PCDHB18PQ96TA0 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC30.75■■■□□ 2.51
Retrieved 100 of 98,524 protein–RNA pairs in 56.1 ms