Protein–RNA interactions for Protein: Q8N9R0

LINC00304, Putative uncharacterized protein encoded by LINC00304, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00304Q8N9R0 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
LINC00304Q8N9R0 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
LINC00304Q8N9R0 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
LINC00304Q8N9R0 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
LINC00304Q8N9R0 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
LINC00304Q8N9R0 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
LINC00304Q8N9R0 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
LINC00304Q8N9R0 AC135983.2-203ENST00000454486 1613 ntBASIC14.97□□□□□ -0.01
LINC00304Q8N9R0 DUX4L13-201ENST00000554103 1267 ntBASIC14.97□□□□□ -0.01
LINC00304Q8N9R0 DUX4L15-201ENST00000611059 1267 ntBASIC14.97□□□□□ -0.01
LINC00304Q8N9R0 DUX4L23-201ENST00000615195 1269 ntBASIC14.97□□□□□ -0.01
LINC00304Q8N9R0 DUX4L24-201ENST00000617576 1269 ntBASIC14.97□□□□□ -0.01
LINC00304Q8N9R0 DUX4L22-201ENST00000618238 1269 ntBASIC14.97□□□□□ -0.01
LINC00304Q8N9R0 DUX4L20-201ENST00000619712 1269 ntBASIC14.97□□□□□ -0.01
LINC00304Q8N9R0 DUX4L21-201ENST00000622058 1269 ntBASIC14.97□□□□□ -0.01
LINC00304Q8N9R0 DUX4L10-201ENST00000622460 1267 ntBASIC14.97□□□□□ -0.01
LINC00304Q8N9R0 DUX4L25-201ENST00000624915 1269 ntBASIC14.97□□□□□ -0.01
LINC00304Q8N9R0 CHML-204ENST00000638121 920 ntTSL 2 BASIC14.97□□□□□ -0.01
LINC00304Q8N9R0 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
LINC00304Q8N9R0 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
LINC00304Q8N9R0 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC14.96□□□□□ -0.01
LINC00304Q8N9R0 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC14.96□□□□□ -0.02
LINC00304Q8N9R0 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
LINC00304Q8N9R0 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
LINC00304Q8N9R0 AP004833.2-201ENST00000532228 1454 ntBASIC14.95□□□□□ -0.02
LINC00304Q8N9R0 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC14.95□□□□□ -0.02
LINC00304Q8N9R0 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
LINC00304Q8N9R0 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC14.95□□□□□ -0.02
LINC00304Q8N9R0 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
LINC00304Q8N9R0 GDI1-215ENST00000630693 786 ntTSL 4 BASIC14.95□□□□□ -0.02
LINC00304Q8N9R0 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
LINC00304Q8N9R0 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
LINC00304Q8N9R0 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
LINC00304Q8N9R0 WHAMMP2-203ENST00000563942 1603 ntBASIC14.95□□□□□ -0.02
LINC00304Q8N9R0 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
LINC00304Q8N9R0 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
LINC00304Q8N9R0 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
LINC00304Q8N9R0 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
LINC00304Q8N9R0 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
LINC00304Q8N9R0 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC14.94□□□□□ -0.02
LINC00304Q8N9R0 MIR3648-2-201ENST00000581792 180 ntBASIC14.94□□□□□ -0.02
LINC00304Q8N9R0 MIR3648-1-201ENST00000615959 180 ntBASIC14.94□□□□□ -0.02
LINC00304Q8N9R0 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC14.94□□□□□ -0.02
LINC00304Q8N9R0 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
LINC00304Q8N9R0 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
LINC00304Q8N9R0 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
LINC00304Q8N9R0 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
LINC00304Q8N9R0 CHST11-202ENST00000546689 756 ntTSL 2 BASIC14.93□□□□□ -0.02
LINC00304Q8N9R0 CR559946.2-201ENST00000623684 991 ntBASIC14.93□□□□□ -0.02
LINC00304Q8N9R0 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LINC00304Q8N9R0 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
LINC00304Q8N9R0 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
LINC00304Q8N9R0 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LINC00304Q8N9R0 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
LINC00304Q8N9R0 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LINC00304Q8N9R0 MBP-237ENST00000579129 1052 ntTSL 5 BASIC14.92□□□□□ -0.02
LINC00304Q8N9R0 AC016575.1-201ENST00000607026 382 ntBASIC14.92□□□□□ -0.02
LINC00304Q8N9R0 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
LINC00304Q8N9R0 MEST-211ENST00000437945 1455 ntTSL 5 BASIC14.92□□□□□ -0.02
LINC00304Q8N9R0 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LINC00304Q8N9R0 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC14.91□□□□□ -0.02
LINC00304Q8N9R0 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LINC00304Q8N9R0 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
LINC00304Q8N9R0 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LINC00304Q8N9R0 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
LINC00304Q8N9R0 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
LINC00304Q8N9R0 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LINC00304Q8N9R0 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
LINC00304Q8N9R0 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LINC00304Q8N9R0 HES6-205ENST00000409356 528 ntTSL 2 BASIC14.91□□□□□ -0.02
LINC00304Q8N9R0 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC14.91□□□□□ -0.02
LINC00304Q8N9R0 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
LINC00304Q8N9R0 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LINC00304Q8N9R0 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
LINC00304Q8N9R0 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
LINC00304Q8N9R0 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
LINC00304Q8N9R0 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
LINC00304Q8N9R0 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC14.9□□□□□ -0.02
LINC00304Q8N9R0 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
LINC00304Q8N9R0 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
LINC00304Q8N9R0 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC14.9□□□□□ -0.02
LINC00304Q8N9R0 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC14.89□□□□□ -0.03
LINC00304Q8N9R0 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC14.89□□□□□ -0.03
LINC00304Q8N9R0 AL139393.2-201ENST00000608721 2025 ntBASIC14.88□□□□□ -0.03
LINC00304Q8N9R0 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LINC00304Q8N9R0 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC14.88□□□□□ -0.03
LINC00304Q8N9R0 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
LINC00304Q8N9R0 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LINC00304Q8N9R0 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LINC00304Q8N9R0 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC14.87□□□□□ -0.03
LINC00304Q8N9R0 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LINC00304Q8N9R0 MIR639-201ENST00000384974 98 ntBASIC14.87□□□□□ -0.03
LINC00304Q8N9R0 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC14.87□□□□□ -0.03
LINC00304Q8N9R0 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC14.87□□□□□ -0.03
LINC00304Q8N9R0 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC14.87□□□□□ -0.03
LINC00304Q8N9R0 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LINC00304Q8N9R0 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
LINC00304Q8N9R0 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
LINC00304Q8N9R0 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
LINC00304Q8N9R0 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC14.86□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 15.5 ms