Protein–RNA interactions for Protein: Q5VT40

FAM78B, Protein FAM78B, humanhuman

Predictions only

Length 261 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM78BQ5VT40 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
FAM78BQ5VT40 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
FAM78BQ5VT40 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
FAM78BQ5VT40 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
FAM78BQ5VT40 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
FAM78BQ5VT40 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
FAM78BQ5VT40 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
FAM78BQ5VT40 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
FAM78BQ5VT40 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC20.11■□□□□ 0.81
FAM78BQ5VT40 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
FAM78BQ5VT40 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
FAM78BQ5VT40 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
FAM78BQ5VT40 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
FAM78BQ5VT40 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC20.1■□□□□ 0.81
FAM78BQ5VT40 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC20.1■□□□□ 0.81
FAM78BQ5VT40 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC20.09■□□□□ 0.81
FAM78BQ5VT40 RARRES2P7-201ENST00000567349 469 ntBASIC20.09■□□□□ 0.81
FAM78BQ5VT40 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
FAM78BQ5VT40 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
FAM78BQ5VT40 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
FAM78BQ5VT40 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.8
FAM78BQ5VT40 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC20.08■□□□□ 0.8
FAM78BQ5VT40 AL133380.1-201ENST00000506013 324 ntBASIC20.07■□□□□ 0.8
FAM78BQ5VT40 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC20.07■□□□□ 0.8
FAM78BQ5VT40 PROC-203ENST00000409048 1586 ntTSL 5 BASIC20.07■□□□□ 0.8
FAM78BQ5VT40 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
FAM78BQ5VT40 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
FAM78BQ5VT40 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC20.06■□□□□ 0.8
FAM78BQ5VT40 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC20.06■□□□□ 0.8
FAM78BQ5VT40 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
FAM78BQ5VT40 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
FAM78BQ5VT40 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
FAM78BQ5VT40 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
FAM78BQ5VT40 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
FAM78BQ5VT40 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
FAM78BQ5VT40 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
FAM78BQ5VT40 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
FAM78BQ5VT40 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
FAM78BQ5VT40 PKM-204ENST00000449901 2526 ntTSL 2 BASIC20.04■□□□□ 0.8
FAM78BQ5VT40 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
FAM78BQ5VT40 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
FAM78BQ5VT40 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC20.03■□□□□ 0.8
FAM78BQ5VT40 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
FAM78BQ5VT40 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
FAM78BQ5VT40 AP004833.2-201ENST00000532228 1454 ntBASIC20.03■□□□□ 0.8
FAM78BQ5VT40 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
FAM78BQ5VT40 SHF-208ENST00000560734 1731 ntTSL 3 BASIC20.02■□□□□ 0.8
FAM78BQ5VT40 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC20.02■□□□□ 0.8
FAM78BQ5VT40 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC20.02■□□□□ 0.8
FAM78BQ5VT40 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
FAM78BQ5VT40 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
FAM78BQ5VT40 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
FAM78BQ5VT40 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
FAM78BQ5VT40 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
FAM78BQ5VT40 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
FAM78BQ5VT40 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
FAM78BQ5VT40 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
FAM78BQ5VT40 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC20.01■□□□□ 0.79
FAM78BQ5VT40 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
FAM78BQ5VT40 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC20.01■□□□□ 0.79
FAM78BQ5VT40 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
FAM78BQ5VT40 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC20■□□□□ 0.79
FAM78BQ5VT40 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC20■□□□□ 0.79
FAM78BQ5VT40 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC20■□□□□ 0.79
FAM78BQ5VT40 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
FAM78BQ5VT40 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
FAM78BQ5VT40 SETD8P1-201ENST00000623146 1180 ntBASIC19.99■□□□□ 0.79
FAM78BQ5VT40 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
FAM78BQ5VT40 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
FAM78BQ5VT40 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
FAM78BQ5VT40 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
FAM78BQ5VT40 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC19.98■□□□□ 0.79
FAM78BQ5VT40 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC19.98■□□□□ 0.79
FAM78BQ5VT40 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
FAM78BQ5VT40 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
FAM78BQ5VT40 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
FAM78BQ5VT40 LINC01003-201ENST00000564834 1764 ntBASIC19.97■□□□□ 0.79
FAM78BQ5VT40 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC19.97■□□□□ 0.79
FAM78BQ5VT40 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
FAM78BQ5VT40 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC19.96■□□□□ 0.79
FAM78BQ5VT40 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC19.96■□□□□ 0.79
FAM78BQ5VT40 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
FAM78BQ5VT40 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC19.96■□□□□ 0.79
FAM78BQ5VT40 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
FAM78BQ5VT40 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
FAM78BQ5VT40 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
FAM78BQ5VT40 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
FAM78BQ5VT40 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC19.95■□□□□ 0.78
FAM78BQ5VT40 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC19.95■□□□□ 0.78
FAM78BQ5VT40 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
FAM78BQ5VT40 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
FAM78BQ5VT40 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
FAM78BQ5VT40 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
FAM78BQ5VT40 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
FAM78BQ5VT40 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
FAM78BQ5VT40 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
FAM78BQ5VT40 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
FAM78BQ5VT40 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
FAM78BQ5VT40 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC19.92■□□□□ 0.78
FAM78BQ5VT40 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 11.4 ms