Protein–RNA interactions for Protein: Q2MKA7

RSPO1, R-spondin-1, humanhuman

Predicted RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO1Q2MKA7 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
RSPO1Q2MKA7 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC22.37■■□□□ 1.17
RSPO1Q2MKA7 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC22.37■■□□□ 1.17
RSPO1Q2MKA7 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC22.37■■□□□ 1.17
RSPO1Q2MKA7 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC22.37■■□□□ 1.17
RSPO1Q2MKA7 AC135983.2-203ENST00000454486 1613 ntBASIC22.37■■□□□ 1.17
RSPO1Q2MKA7 EI24-212ENST00000615917 1407 ntTSL 2 BASIC22.37■■□□□ 1.17
RSPO1Q2MKA7 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC22.36■■□□□ 1.17
RSPO1Q2MKA7 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
RSPO1Q2MKA7 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
RSPO1Q2MKA7 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC22.35■■□□□ 1.17
RSPO1Q2MKA7 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
RSPO1Q2MKA7 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC22.35■■□□□ 1.17
RSPO1Q2MKA7 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC22.35■■□□□ 1.17
RSPO1Q2MKA7 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC22.34■■□□□ 1.17
RSPO1Q2MKA7 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC22.34■■□□□ 1.17
RSPO1Q2MKA7 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC22.34■■□□□ 1.17
RSPO1Q2MKA7 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.17
RSPO1Q2MKA7 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
RSPO1Q2MKA7 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
RSPO1Q2MKA7 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
RSPO1Q2MKA7 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
RSPO1Q2MKA7 AC044849.2-201ENST00000606596 710 ntBASIC22.33■■□□□ 1.17
RSPO1Q2MKA7 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC22.33■■□□□ 1.17
RSPO1Q2MKA7 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC22.33■■□□□ 1.17
RSPO1Q2MKA7 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC22.33■■□□□ 1.16
RSPO1Q2MKA7 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
RSPO1Q2MKA7 WHAMMP2-203ENST00000563942 1603 ntBASIC22.32■■□□□ 1.16
RSPO1Q2MKA7 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC22.32■■□□□ 1.16
RSPO1Q2MKA7 LINC00273-201ENST00000539813 1452 ntBASIC22.32■■□□□ 1.16
RSPO1Q2MKA7 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
RSPO1Q2MKA7 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
RSPO1Q2MKA7 CIB2-204ENST00000557846 934 ntTSL 3 BASIC22.31■■□□□ 1.16
RSPO1Q2MKA7 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC22.31■■□□□ 1.16
RSPO1Q2MKA7 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
RSPO1Q2MKA7 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
RSPO1Q2MKA7 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
RSPO1Q2MKA7 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC22.3■■□□□ 1.16
RSPO1Q2MKA7 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
RSPO1Q2MKA7 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
RSPO1Q2MKA7 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC22.3■■□□□ 1.16
RSPO1Q2MKA7 PROC-203ENST00000409048 1586 ntTSL 5 BASIC22.29■■□□□ 1.16
RSPO1Q2MKA7 RPS2P35-201ENST00000443417 897 ntBASIC22.29■■□□□ 1.16
RSPO1Q2MKA7 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC22.29■■□□□ 1.16
RSPO1Q2MKA7 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
RSPO1Q2MKA7 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC22.29■■□□□ 1.16
RSPO1Q2MKA7 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
RSPO1Q2MKA7 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
RSPO1Q2MKA7 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC22.27■■□□□ 1.16
RSPO1Q2MKA7 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
RSPO1Q2MKA7 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
RSPO1Q2MKA7 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
RSPO1Q2MKA7 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC22.27■■□□□ 1.16
RSPO1Q2MKA7 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC22.27■■□□□ 1.16
RSPO1Q2MKA7 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.15
RSPO1Q2MKA7 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
RSPO1Q2MKA7 BOD1-206ENST00000480951 814 ntTSL 2 BASIC22.26■■□□□ 1.15
RSPO1Q2MKA7 CALM3-209ENST00000597743 577 ntTSL 4 BASIC22.26■■□□□ 1.15
RSPO1Q2MKA7 MEST-211ENST00000437945 1455 ntTSL 5 BASIC22.26■■□□□ 1.15
RSPO1Q2MKA7 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
RSPO1Q2MKA7 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
RSPO1Q2MKA7 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
RSPO1Q2MKA7 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC22.24■■□□□ 1.15
RSPO1Q2MKA7 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
RSPO1Q2MKA7 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC22.24■■□□□ 1.15
RSPO1Q2MKA7 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
RSPO1Q2MKA7 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC22.23■■□□□ 1.15
RSPO1Q2MKA7 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
RSPO1Q2MKA7 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
RSPO1Q2MKA7 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
RSPO1Q2MKA7 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC22.22■■□□□ 1.15
RSPO1Q2MKA7 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
RSPO1Q2MKA7 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
RSPO1Q2MKA7 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC22.21■■□□□ 1.15
RSPO1Q2MKA7 AC021231.2-201ENST00000594613 730 ntBASIC22.21■■□□□ 1.15
RSPO1Q2MKA7 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
RSPO1Q2MKA7 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
RSPO1Q2MKA7 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC22.2■■□□□ 1.14
RSPO1Q2MKA7 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC22.2■■□□□ 1.14
RSPO1Q2MKA7 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
RSPO1Q2MKA7 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
RSPO1Q2MKA7 AP002414.2-202ENST00000590929 1450 ntBASIC22.19■■□□□ 1.14
RSPO1Q2MKA7 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC22.19■■□□□ 1.14
RSPO1Q2MKA7 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC22.19■■□□□ 1.14
RSPO1Q2MKA7 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
RSPO1Q2MKA7 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC22.18■■□□□ 1.14
RSPO1Q2MKA7 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC22.18■■□□□ 1.14
RSPO1Q2MKA7 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
RSPO1Q2MKA7 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC22.17■■□□□ 1.14
RSPO1Q2MKA7 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
RSPO1Q2MKA7 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC22.17■■□□□ 1.14
RSPO1Q2MKA7 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
RSPO1Q2MKA7 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
RSPO1Q2MKA7 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
RSPO1Q2MKA7 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
RSPO1Q2MKA7 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
RSPO1Q2MKA7 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
RSPO1Q2MKA7 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC22.15■■□□□ 1.14
RSPO1Q2MKA7 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
RSPO1Q2MKA7 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC22.15■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 9.8 ms