Protein–RNA interactions for Protein: P51800

CLCNKA, Chloride channel protein ClC-Ka, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKAP51800 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
CLCNKAP51800 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
CLCNKAP51800 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC25.26■■□□□ 1.63
CLCNKAP51800 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC25.26■■□□□ 1.63
CLCNKAP51800 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC25.25■■□□□ 1.63
CLCNKAP51800 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC25.25■■□□□ 1.63
CLCNKAP51800 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC25.25■■□□□ 1.63
CLCNKAP51800 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC25.25■■□□□ 1.63
CLCNKAP51800 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC25.25■■□□□ 1.63
CLCNKAP51800 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC25.24■■□□□ 1.63
CLCNKAP51800 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
CLCNKAP51800 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC25.24■■□□□ 1.63
CLCNKAP51800 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC25.24■■□□□ 1.63
CLCNKAP51800 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC25.24■■□□□ 1.63
CLCNKAP51800 RPS2-202ENST00000526522 924 ntTSL 2 BASIC25.24■■□□□ 1.63
CLCNKAP51800 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
CLCNKAP51800 WHAMMP2-203ENST00000563942 1603 ntBASIC25.23■■□□□ 1.63
CLCNKAP51800 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
CLCNKAP51800 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC25.23■■□□□ 1.63
CLCNKAP51800 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC25.23■■□□□ 1.63
CLCNKAP51800 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC25.22■■□□□ 1.63
CLCNKAP51800 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC25.22■■□□□ 1.63
CLCNKAP51800 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
CLCNKAP51800 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
CLCNKAP51800 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
CLCNKAP51800 HES6-205ENST00000409356 528 ntTSL 2 BASIC25.21■■□□□ 1.63
CLCNKAP51800 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.63
CLCNKAP51800 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
CLCNKAP51800 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC25.2■■□□□ 1.62
CLCNKAP51800 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
CLCNKAP51800 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
CLCNKAP51800 AP004833.2-201ENST00000532228 1454 ntBASIC25.2■■□□□ 1.62
CLCNKAP51800 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC25.19■■□□□ 1.62
CLCNKAP51800 MIR4449-201ENST00000578365 66 ntBASIC25.18■■□□□ 1.62
CLCNKAP51800 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
CLCNKAP51800 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC25.17■■□□□ 1.62
CLCNKAP51800 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC25.17■■□□□ 1.62
CLCNKAP51800 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
CLCNKAP51800 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC25.16■■□□□ 1.62
CLCNKAP51800 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC25.16■■□□□ 1.62
CLCNKAP51800 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
CLCNKAP51800 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC25.15■■□□□ 1.62
CLCNKAP51800 AL139393.2-201ENST00000608721 2025 ntBASIC25.15■■□□□ 1.62
CLCNKAP51800 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
CLCNKAP51800 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC25.14■■□□□ 1.61
CLCNKAP51800 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC25.14■■□□□ 1.61
CLCNKAP51800 MEST-211ENST00000437945 1455 ntTSL 5 BASIC25.14■■□□□ 1.61
CLCNKAP51800 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC25.13■■□□□ 1.61
CLCNKAP51800 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
CLCNKAP51800 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC25.13■■□□□ 1.61
CLCNKAP51800 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
CLCNKAP51800 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
CLCNKAP51800 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
CLCNKAP51800 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC25.12■■□□□ 1.61
CLCNKAP51800 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
CLCNKAP51800 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC25.12■■□□□ 1.61
CLCNKAP51800 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
CLCNKAP51800 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC25.1■■□□□ 1.61
CLCNKAP51800 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC25.09■■□□□ 1.61
CLCNKAP51800 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
CLCNKAP51800 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
CLCNKAP51800 CHST11-202ENST00000546689 756 ntTSL 2 BASIC25.09■■□□□ 1.61
CLCNKAP51800 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC25.09■■□□□ 1.61
CLCNKAP51800 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC25.08■■□□□ 1.6
CLCNKAP51800 METRNL-202ENST00000570778 967 ntTSL 5 BASIC25.07■■□□□ 1.6
CLCNKAP51800 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC25.07■■□□□ 1.6
CLCNKAP51800 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
CLCNKAP51800 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
CLCNKAP51800 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
CLCNKAP51800 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC25.06■■□□□ 1.6
CLCNKAP51800 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
CLCNKAP51800 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC25.06■■□□□ 1.6
CLCNKAP51800 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC25.05■■□□□ 1.6
CLCNKAP51800 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
CLCNKAP51800 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC25.04■■□□□ 1.6
CLCNKAP51800 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC25.04■■□□□ 1.6
CLCNKAP51800 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
CLCNKAP51800 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC25.04■■□□□ 1.6
CLCNKAP51800 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC25.03■■□□□ 1.6
CLCNKAP51800 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC25.03■■□□□ 1.6
CLCNKAP51800 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC25.03■■□□□ 1.6
CLCNKAP51800 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC25.02■■□□□ 1.6
CLCNKAP51800 AC110285.7-201ENST00000624417 1536 ntBASIC25.02■■□□□ 1.6
CLCNKAP51800 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
CLCNKAP51800 AC008813.1-201ENST00000536597 885 ntBASIC25.02■■□□□ 1.6
CLCNKAP51800 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC25.01■■□□□ 1.59
CLCNKAP51800 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
CLCNKAP51800 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC25.01■■□□□ 1.59
CLCNKAP51800 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
CLCNKAP51800 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
CLCNKAP51800 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
CLCNKAP51800 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
CLCNKAP51800 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC25■■□□□ 1.59
CLCNKAP51800 AC139426.1-201ENST00000568218 2529 ntBASIC25■■□□□ 1.59
CLCNKAP51800 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC25■■□□□ 1.59
CLCNKAP51800 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC25■■□□□ 1.59
CLCNKAP51800 AC100797.4-201ENST00000631653 1827 ntBASIC25■■□□□ 1.59
CLCNKAP51800 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC24.99■■□□□ 1.59
CLCNKAP51800 ABCB10P3-201ENST00000561950 2166 ntBASIC24.99■■□□□ 1.59
CLCNKAP51800 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC24.98■■□□□ 1.59
Retrieved 100 of 98,524 protein–RNA pairs in 10 ms