Protein–RNA interactions for Protein: P51800

CLCNKA, Chloride channel protein ClC-Ka, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKAP51800 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC33.69■■■□□ 2.98
CLCNKAP51800 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC32.97■■■□□ 2.87
CLCNKAP51800 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC32.71■■■□□ 2.83
CLCNKAP51800 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC32.69■■■□□ 2.82
CLCNKAP51800 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC32.63■■■□□ 2.81
CLCNKAP51800 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC32.59■■■□□ 2.81
CLCNKAP51800 AL356512.1-201ENST00000607453 1739 ntBASIC32.57■■■□□ 2.81
CLCNKAP51800 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC32.07■■■□□ 2.72
CLCNKAP51800 HES6-203ENST00000409160 1600 ntTSL 2 BASIC31.93■■■□□ 2.7
CLCNKAP51800 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC31.71■■■□□ 2.67
CLCNKAP51800 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC31.66■■■□□ 2.66
CLCNKAP51800 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC31.46■■■□□ 2.63
CLCNKAP51800 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC31.44■■■□□ 2.62
CLCNKAP51800 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC31.36■■■□□ 2.61
CLCNKAP51800 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC31.35■■■□□ 2.61
CLCNKAP51800 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC31.29■■■□□ 2.6
CLCNKAP51800 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
CLCNKAP51800 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC31.19■■■□□ 2.58
CLCNKAP51800 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC31.11■■■□□ 2.57
CLCNKAP51800 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC31.08■■■□□ 2.57
CLCNKAP51800 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC30.86■■■□□ 2.53
CLCNKAP51800 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
CLCNKAP51800 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC30.52■■■□□ 2.48
CLCNKAP51800 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC30.48■■■□□ 2.47
CLCNKAP51800 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC30.47■■■□□ 2.47
CLCNKAP51800 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
CLCNKAP51800 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC30.31■■■□□ 2.44
CLCNKAP51800 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
CLCNKAP51800 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC30.3■■■□□ 2.44
CLCNKAP51800 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC30.26■■■□□ 2.44
CLCNKAP51800 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
CLCNKAP51800 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC30.19■■■□□ 2.42
CLCNKAP51800 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC30.11■■■□□ 2.41
CLCNKAP51800 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC30.07■■■□□ 2.4
CLCNKAP51800 INO80B-203ENST00000409917 796 ntTSL 2 BASIC30.06■■■□□ 2.4
CLCNKAP51800 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC30.02■■■□□ 2.4
CLCNKAP51800 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC30.02■■■□□ 2.4
CLCNKAP51800 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
CLCNKAP51800 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC29.92■■■□□ 2.38
CLCNKAP51800 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC29.89■■■□□ 2.38
CLCNKAP51800 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC29.84■■■□□ 2.37
CLCNKAP51800 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC29.8■■■□□ 2.36
CLCNKAP51800 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC29.78■■■□□ 2.36
CLCNKAP51800 AC015813.7-201ENST00000623294 581 ntBASIC29.77■■■□□ 2.36
CLCNKAP51800 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC29.77■■■□□ 2.36
CLCNKAP51800 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
CLCNKAP51800 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC29.7■■■□□ 2.34
CLCNKAP51800 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC29.63■■■□□ 2.33
CLCNKAP51800 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC29.57■■■□□ 2.32
CLCNKAP51800 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC29.54■■■□□ 2.32
CLCNKAP51800 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC29.54■■■□□ 2.32
CLCNKAP51800 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC29.53■■■□□ 2.32
CLCNKAP51800 AC006077.2-201ENST00000623591 457 ntBASIC29.51■■■□□ 2.31
CLCNKAP51800 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC29.42■■■□□ 2.3
CLCNKAP51800 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
CLCNKAP51800 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.3
CLCNKAP51800 ZNRF2P1-201ENST00000441407 443 ntBASIC29.38■■■□□ 2.29
CLCNKAP51800 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC29.38■■■□□ 2.29
CLCNKAP51800 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC29.32■■■□□ 2.28
CLCNKAP51800 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC29.32■■■□□ 2.28
CLCNKAP51800 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC29.22■■■□□ 2.27
CLCNKAP51800 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC29.2■■■□□ 2.26
CLCNKAP51800 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC29.19■■■□□ 2.26
CLCNKAP51800 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC29.13■■■□□ 2.25
CLCNKAP51800 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC29.11■■■□□ 2.25
CLCNKAP51800 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC29.07■■■□□ 2.24
CLCNKAP51800 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC29■■■□□ 2.23
CLCNKAP51800 ILK-212ENST00000532063 1617 ntTSL 2 BASIC28.98■■■□□ 2.23
CLCNKAP51800 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC28.97■■■□□ 2.23
CLCNKAP51800 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC28.89■■■□□ 2.21
CLCNKAP51800 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC28.88■■■□□ 2.21
CLCNKAP51800 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
CLCNKAP51800 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC28.8■■■□□ 2.2
CLCNKAP51800 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC28.8■■■□□ 2.2
CLCNKAP51800 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC28.79■■■□□ 2.2
CLCNKAP51800 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
CLCNKAP51800 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC28.77■■■□□ 2.2
CLCNKAP51800 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC28.76■■■□□ 2.19
CLCNKAP51800 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC28.75■■■□□ 2.19
CLCNKAP51800 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC28.73■■■□□ 2.19
CLCNKAP51800 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.19
CLCNKAP51800 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC28.7■■■□□ 2.18
CLCNKAP51800 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC28.65■■■□□ 2.18
CLCNKAP51800 AP002365.1-201ENST00000603448 772 ntBASIC28.65■■■□□ 2.18
CLCNKAP51800 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC28.64■■■□□ 2.18
CLCNKAP51800 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC28.64■■■□□ 2.18
CLCNKAP51800 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
CLCNKAP51800 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
CLCNKAP51800 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC28.6■■■□□ 2.17
CLCNKAP51800 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
CLCNKAP51800 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC28.57■■■□□ 2.16
CLCNKAP51800 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC28.56■■■□□ 2.16
CLCNKAP51800 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC28.51■■■□□ 2.15
CLCNKAP51800 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC28.51■■■□□ 2.15
CLCNKAP51800 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
CLCNKAP51800 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC28.47■■■□□ 2.15
CLCNKAP51800 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC28.45■■■□□ 2.15
CLCNKAP51800 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC28.45■■■□□ 2.14
CLCNKAP51800 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC28.44■■■□□ 2.14
CLCNKAP51800 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC28.41■■■□□ 2.14
Retrieved 100 of 98,524 protein–RNA pairs in 16.8 ms