Protein–RNA interactions for Protein: O75626

PRDM1, PR domain zinc finger protein 1, humanhuman

Predictions only

Length 825 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM1O75626 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC30.52■■■□□ 2.48
PRDM1O75626 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC30.52■■■□□ 2.48
PRDM1O75626 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
PRDM1O75626 AGPS-202ENST00000409888 815 ntTSL 4 BASIC30.51■■■□□ 2.47
PRDM1O75626 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC30.51■■■□□ 2.47
PRDM1O75626 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC30.5■■■□□ 2.47
PRDM1O75626 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
PRDM1O75626 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC30.49■■■□□ 2.47
PRDM1O75626 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC30.48■■■□□ 2.47
PRDM1O75626 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
PRDM1O75626 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
PRDM1O75626 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
PRDM1O75626 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC30.47■■■□□ 2.47
PRDM1O75626 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC30.47■■■□□ 2.47
PRDM1O75626 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC30.46■■■□□ 2.47
PRDM1O75626 MIR639-201ENST00000384974 98 ntBASIC30.46■■■□□ 2.47
PRDM1O75626 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC30.46■■■□□ 2.47
PRDM1O75626 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC30.46■■■□□ 2.47
PRDM1O75626 HES6-205ENST00000409356 528 ntTSL 2 BASIC30.44■■■□□ 2.46
PRDM1O75626 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC30.44■■■□□ 2.46
PRDM1O75626 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
PRDM1O75626 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
PRDM1O75626 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
PRDM1O75626 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC30.42■■■□□ 2.46
PRDM1O75626 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC30.41■■■□□ 2.46
PRDM1O75626 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC30.41■■■□□ 2.46
PRDM1O75626 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC30.41■■■□□ 2.46
PRDM1O75626 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC30.4■■■□□ 2.46
PRDM1O75626 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
PRDM1O75626 AL139393.2-201ENST00000608721 2025 ntBASIC30.4■■■□□ 2.46
PRDM1O75626 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC30.39■■■□□ 2.46
PRDM1O75626 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC30.39■■■□□ 2.46
PRDM1O75626 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC30.39■■■□□ 2.45
PRDM1O75626 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
PRDM1O75626 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC30.38■■■□□ 2.45
PRDM1O75626 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
PRDM1O75626 CHST11-202ENST00000546689 756 ntTSL 2 BASIC30.38■■■□□ 2.45
PRDM1O75626 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC30.37■■■□□ 2.45
PRDM1O75626 METRNL-202ENST00000570778 967 ntTSL 5 BASIC30.37■■■□□ 2.45
PRDM1O75626 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
PRDM1O75626 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC30.37■■■□□ 2.45
PRDM1O75626 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC30.37■■■□□ 2.45
PRDM1O75626 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC30.37■■■□□ 2.45
PRDM1O75626 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC30.36■■■□□ 2.45
PRDM1O75626 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
PRDM1O75626 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC30.36■■■□□ 2.45
PRDM1O75626 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
PRDM1O75626 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
PRDM1O75626 MIR4449-201ENST00000578365 66 ntBASIC30.34■■■□□ 2.45
PRDM1O75626 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC30.33■■■□□ 2.45
PRDM1O75626 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
PRDM1O75626 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC30.33■■■□□ 2.45
PRDM1O75626 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
PRDM1O75626 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
PRDM1O75626 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC30.33■■■□□ 2.45
PRDM1O75626 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC30.32■■■□□ 2.44
PRDM1O75626 AC139426.1-201ENST00000568218 2529 ntBASIC30.31■■■□□ 2.44
PRDM1O75626 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
PRDM1O75626 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC30.31■■■□□ 2.44
PRDM1O75626 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC30.3■■■□□ 2.44
PRDM1O75626 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC30.3■■■□□ 2.44
PRDM1O75626 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC30.3■■■□□ 2.44
PRDM1O75626 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC30.29■■■□□ 2.44
PRDM1O75626 AC100797.4-201ENST00000631653 1827 ntBASIC30.29■■■□□ 2.44
PRDM1O75626 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC30.28■■■□□ 2.44
PRDM1O75626 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC30.28■■■□□ 2.44
PRDM1O75626 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC30.28■■■□□ 2.44
PRDM1O75626 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC30.28■■■□□ 2.44
PRDM1O75626 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
PRDM1O75626 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC30.27■■■□□ 2.44
PRDM1O75626 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
PRDM1O75626 AC110285.7-201ENST00000624417 1536 ntBASIC30.27■■■□□ 2.44
PRDM1O75626 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.44
PRDM1O75626 MEST-211ENST00000437945 1455 ntTSL 5 BASIC30.26■■■□□ 2.44
PRDM1O75626 AP004833.2-201ENST00000532228 1454 ntBASIC30.26■■■□□ 2.44
PRDM1O75626 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC30.25■■■□□ 2.43
PRDM1O75626 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
PRDM1O75626 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
PRDM1O75626 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC30.24■■■□□ 2.43
PRDM1O75626 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
PRDM1O75626 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC30.24■■■□□ 2.43
PRDM1O75626 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC30.24■■■□□ 2.43
PRDM1O75626 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC30.23■■■□□ 2.43
PRDM1O75626 ABCB10P3-201ENST00000561950 2166 ntBASIC30.23■■■□□ 2.43
PRDM1O75626 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC30.23■■■□□ 2.43
PRDM1O75626 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC30.22■■■□□ 2.43
PRDM1O75626 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC30.22■■■□□ 2.43
PRDM1O75626 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC30.22■■■□□ 2.43
PRDM1O75626 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC30.22■■■□□ 2.43
PRDM1O75626 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC30.22■■■□□ 2.43
PRDM1O75626 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
PRDM1O75626 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC30.21■■■□□ 2.43
PRDM1O75626 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC30.21■■■□□ 2.43
PRDM1O75626 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC30.2■■■□□ 2.43
PRDM1O75626 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC30.2■■■□□ 2.43
PRDM1O75626 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC30.2■■■□□ 2.43
PRDM1O75626 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC30.2■■■□□ 2.43
PRDM1O75626 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC30.2■■■□□ 2.42
PRDM1O75626 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
PRDM1O75626 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC30.19■■■□□ 2.42
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms