Protein–RNA interactions for Protein: A0A1B0GUT2

LINC00959, HCG1648656, isoform CRA_a, humanhuman

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00959A0A1B0GUT2 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC17.44■□□□□ 0.38
LINC00959A0A1B0GUT2 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
LINC00959A0A1B0GUT2 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
LINC00959A0A1B0GUT2 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
LINC00959A0A1B0GUT2 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LINC00959A0A1B0GUT2 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
LINC00959A0A1B0GUT2 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
LINC00959A0A1B0GUT2 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LINC00959A0A1B0GUT2 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LINC00959A0A1B0GUT2 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
LINC00959A0A1B0GUT2 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
LINC00959A0A1B0GUT2 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
LINC00959A0A1B0GUT2 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC17.41■□□□□ 0.38
LINC00959A0A1B0GUT2 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC17.41■□□□□ 0.38
LINC00959A0A1B0GUT2 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LINC00959A0A1B0GUT2 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC17.41■□□□□ 0.38
LINC00959A0A1B0GUT2 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
LINC00959A0A1B0GUT2 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC17.4■□□□□ 0.38
LINC00959A0A1B0GUT2 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
LINC00959A0A1B0GUT2 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LINC00959A0A1B0GUT2 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC17.4■□□□□ 0.38
LINC00959A0A1B0GUT2 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
LINC00959A0A1B0GUT2 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
LINC00959A0A1B0GUT2 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LINC00959A0A1B0GUT2 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
LINC00959A0A1B0GUT2 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LINC00959A0A1B0GUT2 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LINC00959A0A1B0GUT2 MIR762-201ENST00000390236 83 ntBASIC17.38■□□□□ 0.37
LINC00959A0A1B0GUT2 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
LINC00959A0A1B0GUT2 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC17.37■□□□□ 0.37
LINC00959A0A1B0GUT2 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
LINC00959A0A1B0GUT2 AC100797.4-201ENST00000631653 1827 ntBASIC17.37■□□□□ 0.37
LINC00959A0A1B0GUT2 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
LINC00959A0A1B0GUT2 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
LINC00959A0A1B0GUT2 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
LINC00959A0A1B0GUT2 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
LINC00959A0A1B0GUT2 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LINC00959A0A1B0GUT2 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC17.36■□□□□ 0.37
LINC00959A0A1B0GUT2 RPS2-209ENST00000529806 993 ntTSL 3 BASIC17.36■□□□□ 0.37
LINC00959A0A1B0GUT2 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
LINC00959A0A1B0GUT2 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC17.36■□□□□ 0.37
LINC00959A0A1B0GUT2 CHML-205ENST00000638160 705 ntTSL 3 BASIC17.36■□□□□ 0.37
LINC00959A0A1B0GUT2 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LINC00959A0A1B0GUT2 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
LINC00959A0A1B0GUT2 SHF-208ENST00000560734 1731 ntTSL 3 BASIC17.35■□□□□ 0.37
LINC00959A0A1B0GUT2 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC17.35■□□□□ 0.37
LINC00959A0A1B0GUT2 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LINC00959A0A1B0GUT2 LINC01003-201ENST00000564834 1764 ntBASIC17.35■□□□□ 0.37
LINC00959A0A1B0GUT2 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
LINC00959A0A1B0GUT2 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC17.34■□□□□ 0.37
LINC00959A0A1B0GUT2 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
LINC00959A0A1B0GUT2 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
LINC00959A0A1B0GUT2 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
LINC00959A0A1B0GUT2 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC17.34■□□□□ 0.37
LINC00959A0A1B0GUT2 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
LINC00959A0A1B0GUT2 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
LINC00959A0A1B0GUT2 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
LINC00959A0A1B0GUT2 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
LINC00959A0A1B0GUT2 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
LINC00959A0A1B0GUT2 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
LINC00959A0A1B0GUT2 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
LINC00959A0A1B0GUT2 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC17.33■□□□□ 0.36
LINC00959A0A1B0GUT2 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
LINC00959A0A1B0GUT2 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LINC00959A0A1B0GUT2 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LINC00959A0A1B0GUT2 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC17.32■□□□□ 0.36
LINC00959A0A1B0GUT2 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
LINC00959A0A1B0GUT2 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LINC00959A0A1B0GUT2 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LINC00959A0A1B0GUT2 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LINC00959A0A1B0GUT2 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LINC00959A0A1B0GUT2 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LINC00959A0A1B0GUT2 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC17.31■□□□□ 0.36
LINC00959A0A1B0GUT2 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC17.31■□□□□ 0.36
LINC00959A0A1B0GUT2 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
LINC00959A0A1B0GUT2 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC17.31■□□□□ 0.36
LINC00959A0A1B0GUT2 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC17.3■□□□□ 0.36
LINC00959A0A1B0GUT2 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
LINC00959A0A1B0GUT2 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LINC00959A0A1B0GUT2 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LINC00959A0A1B0GUT2 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LINC00959A0A1B0GUT2 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
LINC00959A0A1B0GUT2 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC17.29■□□□□ 0.36
LINC00959A0A1B0GUT2 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC17.28■□□□□ 0.36
LINC00959A0A1B0GUT2 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
LINC00959A0A1B0GUT2 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
LINC00959A0A1B0GUT2 AC005559.1-201ENST00000589661 871 ntBASIC17.28■□□□□ 0.36
LINC00959A0A1B0GUT2 AP002414.2-202ENST00000590929 1450 ntBASIC17.28■□□□□ 0.36
LINC00959A0A1B0GUT2 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC17.28■□□□□ 0.36
LINC00959A0A1B0GUT2 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
LINC00959A0A1B0GUT2 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
LINC00959A0A1B0GUT2 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC17.28■□□□□ 0.36
LINC00959A0A1B0GUT2 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
LINC00959A0A1B0GUT2 CREM-210ENST00000374721 2020 ntTSL 5 BASIC17.27■□□□□ 0.36
LINC00959A0A1B0GUT2 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC17.27■□□□□ 0.36
LINC00959A0A1B0GUT2 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
LINC00959A0A1B0GUT2 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
LINC00959A0A1B0GUT2 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
LINC00959A0A1B0GUT2 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
LINC00959A0A1B0GUT2 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC17.26■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 7.9 ms