Protein–RNA interactions for Protein: Q86U42

PABPN1, Polyadenylate-binding protein 2, humanhuman

Known RBP eCLIP

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1Q86U42 NXF1-206ENST00000527902 619 ntTSL 334.77■■■■□ 3.169e-7■□□□□ 8.8
PABPN1Q86U42 NXF1-216ENST00000533499 936 ntTSL 533.2■■■□□ 2.919e-7■□□□□ 8.8
PABPN1Q86U42 NXF1-214ENST00000533048 922 ntTSL 527.28■■□□□ 1.969e-7■□□□□ 8.8
PABPN1Q86U42 NXF1-201ENST00000294172 2346 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.39e-7■□□□□ 8.8
PABPN1Q86U42 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC22.91■■□□□ 1.269e-7■□□□□ 8.8
PABPN1Q86U42 NXF1-211ENST00000531709 4128 ntTSL 1 (best) BASIC16.98■□□□□ 0.319e-7■□□□□ 8.8
PABPN1Q86U42 NXF1-205ENST00000527497 529 ntTSL 210.96□□□□□ -0.659e-7■□□□□ 8.8
PABPN1Q86U42 SEMA3B-211ENST00000612509 1061 ntTSL 535.9■■■■□ 3.344e-7■□□□□ 8.8
PABPN1Q86U42 ABCA2-217ENST00000479446 6295 ntTSL 1 (best)27.53■■■□□ 27e-6■□□□□ 8.8
PABPN1Q86U42 ABCA2-201ENST00000265662 8154 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.477e-6■□□□□ 8.8
PABPN1Q86U42 ABCA2-203ENST00000371605 8151 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.467e-6■□□□□ 8.8
PABPN1Q86U42 ABCA2-202ENST00000341511 8063 ntAPPRIS P2 TSL 5 BASIC17.06■□□□□ 0.327e-6■□□□□ 8.8
PABPN1Q86U42 ABCA2-218ENST00000487109 8031 ntTSL 1 (best)17.06■□□□□ 0.327e-6■□□□□ 8.8
PABPN1Q86U42 ABCA2-208ENST00000459850 8073 ntTSL 1 (best)16.58■□□□□ 0.247e-6■□□□□ 8.8
PABPN1Q86U42 ABCA2-223ENST00000614293 8146 ntTSL 5 BASIC16.34■□□□□ 0.217e-6■□□□□ 8.8
PABPN1Q86U42 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC39.95■■■■□ 3.991e-16■□□□□ 8.8
PABPN1Q86U42 ASGR1-203ENST00000570576 627 ntTSL 525.18■■□□□ 1.621e-16■□□□□ 8.8
PABPN1Q86U42 NAP1L4-207ENST00000469805 2294 ntTSL 328.41■■■□□ 2.141e-7■□□□□ 8.8
PABPN1Q86U42 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC26.09■■□□□ 1.771e-7■□□□□ 8.8
PABPN1Q86U42 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.521e-7■□□□□ 8.8
PABPN1Q86U42 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC35.23■■■■□ 3.237e-17■□□□□ 8.8
PABPN1Q86U42 ASGR1-207ENST00000574330 887 ntTSL 534.24■■■■□ 3.077e-17■□□□□ 8.8
PABPN1Q86U42 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC36.66■■■■□ 3.469e-7■□□□□ 8.8
PABPN1Q86U42 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC36.26■■■■□ 3.49e-7■□□□□ 8.8
PABPN1Q86U42 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC30.15■■■□□ 2.429e-7■□□□□ 8.8
PABPN1Q86U42 RPL36-204ENST00000579446 452 ntTSL 2 BASIC23.01■■□□□ 1.279e-7■□□□□ 8.8
PABPN1Q86U42 RPL36-205ENST00000579649 449 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.779e-7■□□□□ 8.8
PABPN1Q86U42 MLXIPL-207ENST00000453275 690 ntTSL 539.67■■■■□ 3.946e-8■□□□□ 8.7
PABPN1Q86U42 MLXIPL-208ENST00000456640 706 ntTSL 533.86■■■■□ 3.016e-8■□□□□ 8.7
PABPN1Q86U42 MLXIPL-211ENST00000488212 534 ntTSL 220.51■□□□□ 0.876e-8■□□□□ 8.7
PABPN1Q86U42 USP34-203ENST00000436269 1827 ntTSL 58.3□□□□□ -1.085e-12■□□□□ 8.7
PABPN1Q86U42 USP34-202ENST00000411912 4309 ntTSL 57.09□□□□□ -1.275e-12■□□□□ 8.7
PABPN1Q86U42 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.45e-12■□□□□ 8.7
PABPN1Q86U42 ENO2-212ENST00000542509 825 ntTSL 527.9■■■□□ 2.062e-7■□□□□ 8.7
PABPN1Q86U42 CDC37-208ENST00000590632 601 ntTSL 236.09■■■■□ 3.371e-7■□□□□ 8.7
PABPN1Q86U42 CDC37-204ENST00000589331 537 ntTSL 231.84■■■□□ 2.691e-7■□□□□ 8.7
PABPN1Q86U42 CEP250-206ENST00000425525 918 ntTSL 331.23■■■□□ 2.594e-9■□□□□ 8.7
PABPN1Q86U42 NKD1-203ENST00000566396 748 ntTSL 329.21■■■□□ 2.275e-11■□□□□ 8.7
PABPN1Q86U42 CDC37-205ENST00000589625 587 ntTSL 229.02■■■□□ 2.241e-7■□□□□ 8.7
PABPN1Q86U42 SNHG25-202ENST00000582965 278 ntTSL 2 BASIC27.34■■□□□ 1.974e-9■□□□□ 8.7
PABPN1Q86U42 CLK3-222ENST00000568232 958 nt26.21■■□□□ 1.794e-9■□□□□ 8.7
PABPN1Q86U42 SNHG25-201ENST00000580828 106 ntTSL 224.55■■□□□ 1.524e-9■□□□□ 8.7
PABPN1Q86U42 RBM5-222ENST00000492430 580 ntTSL 318.13■□□□□ 0.494e-8■□□□□ 8.7
PABPN1Q86U42 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC26.23■■□□□ 1.791e-7■□□□□ 8.7
PABPN1Q86U42 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.521e-7■□□□□ 8.7
PABPN1Q86U42 LSS-201ENST00000356396 2995 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.461e-7■□□□□ 8.7
PABPN1Q86U42 LSS-210ENST00000491729 2143 ntTSL 223.57■■□□□ 1.361e-7■□□□□ 8.7
PABPN1Q86U42 LSS-203ENST00000419093 517 ntTSL 319.15■□□□□ 0.661e-7■□□□□ 8.7
PABPN1Q86U42 LSS-208ENST00000474319 3601 ntTSL 217.53■□□□□ 0.41e-7■□□□□ 8.7
PABPN1Q86U42 KDM5D-203ENST00000415360 880 ntTSL 336.45■■■■□ 3.431e-7■□□□□ 8.7
PABPN1Q86U42 GMPR2-207ENST00000558007 469 ntTSL 234.32■■■■□ 3.081e-7■□□□□ 8.7
PABPN1Q86U42 GMPR2-211ENST00000558748 657 ntTSL 333.28■■■□□ 2.921e-7■□□□□ 8.7
PABPN1Q86U42 GMPR2-209ENST00000558483 857 ntTSL 330.97■■■□□ 2.551e-7■□□□□ 8.7
PABPN1Q86U42 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC30.57■■■□□ 2.481e-7■□□□□ 8.7
PABPN1Q86U42 ATP13A1-210ENST00000491221 937 ntTSL 228.74■■■□□ 2.191e-7■□□□□ 8.7
PABPN1Q86U42 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC26.96■■□□□ 1.911e-7■□□□□ 8.7
PABPN1Q86U42 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC26.71■■□□□ 1.871e-7■□□□□ 8.7
PABPN1Q86U42 GMPR2-223ENST00000559836 1893 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.871e-7■□□□□ 8.7
PABPN1Q86U42 GMPR2-205ENST00000456667 1484 ntTSL 1 (best) BASIC25.6■■□□□ 1.691e-7■□□□□ 8.7
PABPN1Q86U42 GMPR2-229ENST00000561038 2160 ntTSL 1 (best)25.37■■□□□ 1.651e-7■□□□□ 8.7
PABPN1Q86U42 ATP13A1-206ENST00000471063 373 ntTSL 224.89■■□□□ 1.581e-7■□□□□ 8.7
PABPN1Q86U42 GMPR2-201ENST00000348719 1684 ntTSL 5 BASIC24.52■■□□□ 1.521e-7■□□□□ 8.7
PABPN1Q86U42 GMPR2-224ENST00000559910 1562 ntTSL 5 BASIC24.4■■□□□ 1.51e-7■□□□□ 8.7
PABPN1Q86U42 GMPR2-206ENST00000557854 2025 ntTSL 1 (best) BASIC23.87■■□□□ 1.411e-7■□□□□ 8.7
PABPN1Q86U42 GMPR2-218ENST00000559287 1748 ntTSL 1 (best)23.4■■□□□ 1.341e-7■□□□□ 8.7
PABPN1Q86U42 GMPR2-202ENST00000355299 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.841e-7■□□□□ 8.7
PABPN1Q86U42 GMPR2-225ENST00000559943 360 ntTSL 318.29■□□□□ 0.521e-7■□□□□ 8.7
PABPN1Q86U42 GMPR2-220ENST00000559479 573 ntTSL 316.15■□□□□ 0.181e-7■□□□□ 8.7
PABPN1Q86U42 GMPR2-203ENST00000399440 1652 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.011e-7■□□□□ 8.7
PABPN1Q86U42 GMPR2-215ENST00000558932 231 ntTSL 311.36□□□□□ -0.591e-7■□□□□ 8.7
PABPN1Q86U42 GMPR2-213ENST00000558788 517 ntTSL 511.35□□□□□ -0.591e-7■□□□□ 8.7
PABPN1Q86U42 ENTPD6-214ENST00000463734 639 ntTSL 228.42■■■□□ 2.149e-8■□□□□ 8.7
PABPN1Q86U42 ACTN4-208ENST00000497637 877 ntTSL 240.3■■■■■ 4.045e-13■□□□□ 8.6
PABPN1Q86U42 RBM39-228ENST00000471635 549 ntTSL 215.12■□□□□ 0.019e-8■□□□□ 8.6
PABPN1Q86U42 RBM39-227ENST00000470563 384 ntTSL 313.02□□□□□ -0.339e-8■□□□□ 8.6
PABPN1Q86U42 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC48.75■■■■■ 5.45e-7■□□□□ 8.6
PABPN1Q86U42 KHSRP-205ENST00000595223 956 ntTSL 536.15■■■■□ 3.385e-7■□□□□ 8.6
PABPN1Q86U42 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC35.04■■■■□ 3.25e-7■□□□□ 8.6
PABPN1Q86U42 KHSRP-203ENST00000594745 379 ntTSL 330.21■■■□□ 2.435e-7■□□□□ 8.6
PABPN1Q86U42 AZGP1-205ENST00000483612 679 ntTSL 329.86■■■□□ 2.375e-7■□□□□ 8.6
PABPN1Q86U42 AZGP1-203ENST00000419575 719 ntTSL 328.13■■■□□ 2.095e-7■□□□□ 8.6
PABPN1Q86U42 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC26.14■■□□□ 1.775e-7■□□□□ 8.6
PABPN1Q86U42 CLCN7-209ENST00000565092 2740 ntTSL 226.12■■□□□ 1.775e-7■□□□□ 8.6
PABPN1Q86U42 AZGP1-201ENST00000292401 1307 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.595e-7■□□□□ 8.6
PABPN1Q86U42 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.425e-7■□□□□ 8.6
PABPN1Q86U42 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC23.17■■□□□ 1.35e-7■□□□□ 8.6
PABPN1Q86U42 CLCN7-203ENST00000448525 4151 ntTSL 2 BASIC22.7■■□□□ 1.225e-7■□□□□ 8.6
PABPN1Q86U42 CLCN7-205ENST00000563642 4184 ntTSL 221.35■■□□□ 1.015e-7■□□□□ 8.6
PABPN1Q86U42 ANAPC5-203ENST00000422342 1141 ntTSL 220.28■□□□□ 0.845e-7■□□□□ 8.6
PABPN1Q86U42 KHSRP-208ENST00000597656 328 ntTSL 516.14■□□□□ 0.175e-7■□□□□ 8.6
PABPN1Q86U42 UQCRC2-204ENST00000563711 2008 ntTSL 213.51□□□□□ -0.255e-7■□□□□ 8.6
PABPN1Q86U42 MTOR-201ENST00000361445 8677 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.445e-7■□□□□ 8.6
PABPN1Q86U42 MTOR-202ENST00000376838 4017 ntTSL 2 BASIC10.36□□□□□ -0.755e-7■□□□□ 8.6
PABPN1Q86U42 UQCRC2-209ENST00000567597 312 ntTSL 55□□□□□ -1.615e-7■□□□□ 8.6
PABPN1Q86U42 ABCA2-211ENST00000464520 886 ntTSL 249.43■■■■■ 5.51e-5■□□□□ 8.6
PABPN1Q86U42 ACSS2-216ENST00000484354 517 ntTSL 546.73■■■■■ 5.071e-5■□□□□ 8.6
PABPN1Q86U42 ACSS2-205ENST00000467019 504 ntTSL 444.68■■■■■ 4.741e-5■□□□□ 8.6
PABPN1Q86U42 CDK18-212ENST00000504162 556 ntTSL 444.57■■■■■ 4.734e-9■□□□□ 8.6
PABPN1Q86U42 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC43.52■■■■■ 4.561e-5■□□□□ 8.6
PABPN1Q86U42 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC43.2■■■■■ 4.511e-5■□□□□ 8.6
Retrieved 100 of 8,254 protein–RNA pairs in 328.3 ms