RNA–Protein interactions for RNA: ENST00000436269.1

USP34-203, Transcript of ubiquitin specific peptidase 34, humanhuman

TSL 5

Gene USP34, Length 1,827 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP34-203ENST00000436269 AEBP2Q6ZN18 517 aaPredicted RBP14.93□□□□□ -0.02
USP34-203ENST00000436269 CHIC1Q5VXU3 224 aa14.52□□□□□ -0.08
USP34-203ENST00000436269 PHF23Q9BUL5 403 aaPredicted RBP12.95□□□□□ -0.34
USP34-203ENST00000436269 SENP3Q9H4L4 574 aaPredicted RBP12.37□□□□□ -0.43
USP34-203ENST00000436269 POTEDQ86YR6 584 aa12□□□□□ -0.49
USP34-203ENST00000436269 PLPPR3Q6T4P5 718 aa11.76□□□□□ -0.53
USP34-203ENST00000436269 FOXD1Q16676 465 aa11.65□□□□□ -0.54
USP34-203ENST00000436269 PPP6R1Q9UPN7 881 aa11.42□□□□□ -0.58
USP34-203ENST00000436269 ADRA2BP18089 450 aa11.37□□□□□ -0.59
USP34-203ENST00000436269 PIAS4Q8N2W9 510 aaPredicted RBP10.94□□□□□ -0.66
USP34-203ENST00000436269 KCNA4P22459 653 aa10.48□□□□□ -0.73
USP34-203ENST00000436269 PPP4R3CPQ6ZMV5 832 aa10.47□□□□□ -0.73
USP34-203ENST00000436269 MSH5O43196 834 aa10.47□□□□□ -0.73
USP34-203ENST00000436269 MAPK8IP2Q13387 824 aaPredicted RBP10.33□□□□□ -0.76
USP34-203ENST00000436269 NPM3O75607 178 aaKnown RBP10.13□□□□□ -0.79
USP34-203ENST00000436269 SCAF1Q9H7N4 1312 aaKnown RBP10.06□□□□□ -0.8
USP34-203ENST00000436269 CNKSR2Q8WXI2 1034 aa10.06□□□□□ -0.8
USP34-203ENST00000436269 NCBP3Q53F19 620 aaKnown RBP10.04□□□□□ -0.8
USP34-203ENST00000436269 DMRT2Q9Y5R5 561 aa9.96□□□□□ -0.81
USP34-203ENST00000436269 SLC4A1APQ9BWU0 796 aaKnown RBP9.88□□□□□ -0.83
USP34-203ENST00000436269 EHMT2Q96KQ7 1210 aa9.87□□□□□ -0.83
USP34-203ENST00000436269 RNF216Q9NWF9 866 aaPredicted RBP9.84□□□□□ -0.83
USP34-203ENST00000436269 HOXD11P31277 338 aaPredicted RBP9.8□□□□□ -0.84
USP34-203ENST00000436269 ZBTB22O15209 634 aa9.74□□□□□ -0.85
USP34-203ENST00000436269 CSRNP3Q8WYN3 585 aa9.7□□□□□ -0.86
USP34-203ENST00000436269 DNAJC5BQ9UF47 199 aa9.62□□□□□ -0.87
USP34-203ENST00000436269 SLC4A2P04920 1241 aa9.59□□□□□ -0.87
USP34-203ENST00000436269 DCAF8L1A6NGE4 600 aa9.55□□□□□ -0.88
USP34-203ENST00000436269 FOXD4L1Q9NU39 408 aa9.46□□□□□ -0.9
USP34-203ENST00000436269 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.31□□□□□ -0.921e-7■■■■□ 24.4
USP34-203ENST00000436269 U3KPZ7 1027 aaPredicted RBP9.29□□□□□ -0.92
USP34-203ENST00000436269 ATF5Q9Y2D1 282 aaPredicted RBP9.23□□□□□ -0.93
USP34-203ENST00000436269 MYCNP04198 464 aaPredicted RBP9.22□□□□□ -0.93
USP34-203ENST00000436269 CACNB1Q02641 598 aaPredicted RBP9.17□□□□□ -0.94
USP34-203ENST00000436269 RNF39Q9H2S5 420 aa9.11□□□□□ -0.95
USP34-203ENST00000436269 POTEHQ6S545 545 aa9.07□□□□□ -0.96
USP34-203ENST00000436269 SPINK5Q9NQ38 1064 aaPredicted RBP9.06□□□□□ -0.96
USP34-203ENST00000436269 ATXN8OSP0DMR3 200 aa9.01□□□□□ -0.97
USP34-203ENST00000436269 SAMD1Q6SPF0 538 aaPredicted RBP8.98□□□□□ -0.97
USP34-203ENST00000436269 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.93□□□□□ -0.98
USP34-203ENST00000436269 HNRNPUL2Q1KMD3 747 aaKnown RBP8.93□□□□□ -0.98
USP34-203ENST00000436269 TRHP20396 242 aaPredicted RBP8.91□□□□□ -0.98
USP34-203ENST00000436269 C1QBPQ07021 282 aaKnown RBP8.89□□□□□ -0.99
USP34-203ENST00000436269 ZNF219Q9P2Y4 722 aaPredicted RBP8.88□□□□□ -0.99
USP34-203ENST00000436269 CAPN15O75808 1086 aa8.87□□□□□ -0.99
USP34-203ENST00000436269 ABCB7O75027 752 aa8.83□□□□□ -1
USP34-203ENST00000436269 POLA2Q14181 598 aa8.79□□□□□ -1
USP34-203ENST00000436269 MKRN4PQ13434 485 aaPredicted RBP8.78□□□□□ -1
USP34-203ENST00000436269 DSG3P32926 999 aa8.75□□□□□ -1.01
USP34-203ENST00000436269 APLP2Q06481 763 aa8.73□□□□□ -1.01
USP34-203ENST00000436269 FKBP8Q14318 412 aa8.7□□□□□ -1.02
USP34-203ENST00000436269 OSCARQ8IYS5 282 aa8.53□□□□□ -1.04
USP34-203ENST00000436269 SPDYE4A6NLX3 237 aa8.51□□□□□ -1.05
USP34-203ENST00000436269 FBLN2P98095 1184 aa8.51□□□□□ -1.05
USP34-203ENST00000436269 ZBTB12Q9Y330 459 aaPredicted RBP8.41□□□□□ -1.06
USP34-203ENST00000436269 PROM2Q8N271 834 aa8.4□□□□□ -1.06
USP34-203ENST00000436269 ZNF692Q9BU19 519 aaPredicted RBP8.36□□□□□ -1.07
USP34-203ENST00000436269 SSUH2Q9Y2M2 353 aa8.34□□□□□ -1.07
USP34-203ENST00000436269 SPDYE2BA6NHP3 402 aa8.31□□□□□ -1.08
USP34-203ENST00000436269 SPDYE6P0CI01 402 aa8.31□□□□□ -1.08
USP34-203ENST00000436269 SPDYE2Q495Y8 402 aa8.31□□□□□ -1.08
USP34-203ENST00000436269 PABPN1Q86U42 306 aaKnown RBP eCLIP8.3□□□□□ -1.085e-12■□□□□ 8.7
USP34-203ENST00000436269 PLSCR2Q9NRY7 297 aa8.26□□□□□ -1.09
USP34-203ENST00000436269 RTN4Q9NQC3 1192 aaKnown RBP8.23□□□□□ -1.09
USP34-203ENST00000436269 VASPP50552 380 aaPredicted RBP8.19□□□□□ -1.1
USP34-203ENST00000436269 IFNLR1Q8IU57 520 aaPredicted RBP8.18□□□□□ -1.1
USP34-203ENST00000436269 REM2Q8IYK8 340 aaPredicted RBP8.15□□□□□ -1.11
USP34-203ENST00000436269 FBXO3Q9UK99 471 aa8.13□□□□□ -1.11
USP34-203ENST00000436269 AKT1S1Q96B36 256 aa8.13□□□□□ -1.11
USP34-203ENST00000436269 RBM42Q9BTD8 480 aaKnown RBP8.12□□□□□ -1.11
USP34-203ENST00000436269 SLC24A1O60721 1099 aa8.1□□□□□ -1.11
USP34-203ENST00000436269 PITPNM1O00562 1244 aa8.09□□□□□ -1.11
USP34-203ENST00000436269 CLEC11AQ9Y240 323 aa8.09□□□□□ -1.11
USP34-203ENST00000436269 MIER1Q8N108 512 aa8.02□□□□□ -1.13
USP34-203ENST00000436269 SPDYE1Q8NFV5 336 aaPredicted RBP8.01□□□□□ -1.13
USP34-203ENST00000436269 AMER1Q5JTC6 1135 aaPredicted RBP8.01□□□□□ -1.13
USP34-203ENST00000436269 PLCD3Q8N3E9 789 aa8.01□□□□□ -1.13
USP34-203ENST00000436269 CREBZFQ9NS37 354 aa8.01□□□□□ -1.13
USP34-203ENST00000436269 STAG3Q9UJ98 1225 aa8.01□□□□□ -1.13
USP34-203ENST00000436269 CHADLQ6NUI6 762 aa7.99□□□□□ -1.13
USP34-203ENST00000436269 MNX1P50219 401 aaPredicted RBP7.97□□□□□ -1.13
USP34-203ENST00000436269 PRR29P0C7W0 189 aa7.96□□□□□ -1.13
USP34-203ENST00000436269 PKD2Q13563 968 aa7.96□□□□□ -1.13
USP34-203ENST00000436269 KLHL34Q8N239 644 aa7.96□□□□□ -1.13
USP34-203ENST00000436269 SPOCK2Q92563 424 aa7.9□□□□□ -1.14
USP34-203ENST00000436269 NUBP1P53384 320 aa7.88□□□□□ -1.15
USP34-203ENST00000436269 CHRDL2Q6WN34 429 aa7.88□□□□□ -1.15
USP34-203ENST00000436269 FXR2P51116 673 aaKnown RBP eCLIP7.87□□□□□ -1.153e-8■■■□□ 17
USP34-203ENST00000436269 PIP4P2Q8N4L2 257 aa7.87□□□□□ -1.15
USP34-203ENST00000436269 RASEFQ8IZ41 740 aa7.86□□□□□ -1.15
USP34-203ENST00000436269 PRKAR2AP13861 404 aaKnown RBP7.85□□□□□ -1.15
USP34-203ENST00000436269 CIZ1Q9ULV3 898 aaPredicted RBP7.82□□□□□ -1.16
USP34-203ENST00000436269 RGL2O15211 777 aa7.81□□□□□ -1.16
USP34-203ENST00000436269 FARP1Q9Y4F1 1045 aaPredicted RBP7.8□□□□□ -1.16
USP34-203ENST00000436269 RNF25Q96BH1 459 aaPredicted RBP7.79□□□□□ -1.16
USP34-203ENST00000436269 ECM2O94769 699 aaPredicted RBP7.78□□□□□ -1.16
USP34-203ENST00000436269 PLEKHG5O94827 1062 aa7.78□□□□□ -1.16
USP34-203ENST00000436269 NPM1P06748 294 aaKnown RBP eCLIP7.75□□□□□ -1.17
USP34-203ENST00000436269 DCAF8Q5TAQ9 597 aa7.75□□□□□ -1.17
USP34-203ENST00000436269 SP7Q8TDD2 431 aaPredicted RBP7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms