RNA–Protein interactions for RNA: ENST00000265662.9

ABCA2-201, Transcript of ATP binding cassette subfamily A member 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene ABCA2, Length 8,154 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA2-201ENST00000265662 DCAF8L2P0C7V8 631 aa22.55■■□□□ 1.2
ABCA2-201ENST00000265662 SUPT5HO00267 1087 aaKnown RBP22.39■■□□□ 1.17
ABCA2-201ENST00000265662 PELP1Q8IZL8 1130 aaKnown RBP22.35■■□□□ 1.17
ABCA2-201ENST00000265662 MYT1Q01538 1121 aa22.08■■□□□ 1.13
ABCA2-201ENST00000265662 PCGF6Q9BYE7 350 aa22■■□□□ 1.11
ABCA2-201ENST00000265662 EHMT2Q96KQ7 1210 aa21.95■■□□□ 1.1
ABCA2-201ENST00000265662 SHROOM4Q9ULL8 1493 aa21.84■■□□□ 1.09
ABCA2-201ENST00000265662 CENPBP07199 599 aaPredicted RBP21.64■■□□□ 1.05
ABCA2-201ENST00000265662 ERICH6Q7L0X2 663 aa21.54■■□□□ 1.04
ABCA2-201ENST00000265662 TTBK1Q5TCY1 1321 aaPredicted RBP21.35■■□□□ 1.01
ABCA2-201ENST00000265662 NISCHQ9Y2I1 1504 aa21.34■■□□□ 1.01
ABCA2-201ENST00000265662 YTHDC1Q96MU7 727 aaKnown RBP21.3■■□□□ 1
ABCA2-201ENST00000265662 ZEB1P37275 1124 aaPredicted RBP21.29■■□□□ 1
ABCA2-201ENST00000265662 CCER1Q8TC90 406 aaPredicted RBP21.19■□□□□ 0.98
ABCA2-201ENST00000265662 HRCP23327 699 aa21.18■□□□□ 0.98
ABCA2-201ENST00000265662 FAM9AQ8IZU1 332 aaPredicted RBP21.16■□□□□ 0.98
ABCA2-201ENST00000265662 APLP2Q06481 763 aa20.97■□□□□ 0.95
ABCA2-201ENST00000265662 PPARGC1BQ86YN6 1023 aaKnown RBP20.97■□□□□ 0.95
ABCA2-201ENST00000265662 NEFLP07196 543 aa20.86■□□□□ 0.93
ABCA2-201ENST00000265662 TRIM26Q12899 539 aaPredicted RBP20.69■□□□□ 0.9
ABCA2-201ENST00000265662 RANGAP1P46060 587 aaPredicted RBP20.56■□□□□ 0.88
ABCA2-201ENST00000265662 TRIM41Q8WV44 630 aa20.51■□□□□ 0.87
ABCA2-201ENST00000265662 GTF3C3Q9Y5Q9 886 aa20.46■□□□□ 0.87
ABCA2-201ENST00000265662 DIEXFQ68CQ4 756 aaKnown RBP20.37■□□□□ 0.85
ABCA2-201ENST00000265662 LOC105371045A0A1W2PR82 267 aa20.33■□□□□ 0.85
ABCA2-201ENST00000265662 DAXXQ9UER7 740 aaPredicted RBP20.25■□□□□ 0.83
ABCA2-201ENST00000265662 UBTFP17480 764 aaKnown RBP20.23■□□□□ 0.83
ABCA2-201ENST00000265662 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.18■□□□□ 0.82
ABCA2-201ENST00000265662 RTL5Q5HYW3 569 aaPredicted RBP20.18■□□□□ 0.82
ABCA2-201ENST00000265662 ATP1B4Q9UN42 357 aaPredicted RBP20.14■□□□□ 0.81
ABCA2-201ENST00000265662 BCANQ96GW7 911 aa20.11■□□□□ 0.81
ABCA2-201ENST00000265662 ACIN1Q9UKV3 1341 aaKnown RBP20.08■□□□□ 0.8
ABCA2-201ENST00000265662 CHIC1Q5VXU3 224 aa19.98■□□□□ 0.79
ABCA2-201ENST00000265662 HNRNPUL2Q1KMD3 747 aaKnown RBP19.96■□□□□ 0.79
ABCA2-201ENST00000265662 SCAF1Q9H7N4 1312 aaKnown RBP19.94■□□□□ 0.78
ABCA2-201ENST00000265662 CNGB1Q14028 1251 aaPredicted RBP19.93■□□□□ 0.78
ABCA2-201ENST00000265662 ITGAEP38570 1179 aa19.9■□□□□ 0.78
ABCA2-201ENST00000265662 ZNF316A6NFI3 1004 aaPredicted RBP19.87■□□□□ 0.77
ABCA2-201ENST00000265662 POLR3GLQ9BT43 218 aa19.84■□□□□ 0.77
ABCA2-201ENST00000265662 EIF5BO60841 1220 aaKnown RBP19.77■□□□□ 0.75
ABCA2-201ENST00000265662 CDK11AQ9UQ88 783 aaPredicted RBP19.75■□□□□ 0.75
ABCA2-201ENST00000265662 NEUROD1Q13562 356 aa19.69■□□□□ 0.74
ABCA2-201ENST00000265662 CLSPNQ9HAW4 1339 aa19.63■□□□□ 0.73
ABCA2-201ENST00000265662 NBR1Q14596 966 aa19.45■□□□□ 0.7
ABCA2-201ENST00000265662 FKBP8Q14318 412 aa19.43■□□□□ 0.7
ABCA2-201ENST00000265662 ANP32AP39687 249 aaKnown RBP19.42■□□□□ 0.7
ABCA2-201ENST00000265662 ANP32CO43423 234 aa19.4■□□□□ 0.7
ABCA2-201ENST00000265662 NPM2Q86SE8 214 aaKnown RBP19.39■□□□□ 0.69
ABCA2-201ENST00000265662 BCL11AQ9H165 835 aa19.39■□□□□ 0.69
ABCA2-201ENST00000265662 GLIPR1L2Q4G1C9 344 aa19.35■□□□□ 0.69
ABCA2-201ENST00000265662 ANP32EQ9BTT0 268 aa19.32■□□□□ 0.68
ABCA2-201ENST00000265662 MYT1LQ9UL68 1186 aa19.27■□□□□ 0.67
ABCA2-201ENST00000265662 FAM50AQ14320 339 aaKnown RBP19.17■□□□□ 0.66
ABCA2-201ENST00000265662 SLC4A1APQ9BWU0 796 aaKnown RBP19.12■□□□□ 0.65
ABCA2-201ENST00000265662 ARXQ96QS3 562 aa19.09■□□□□ 0.65
ABCA2-201ENST00000265662 DCAF1Q9Y4B6 1507 aa19.09■□□□□ 0.65
ABCA2-201ENST00000265662 MIER1Q8N108 512 aa19.09■□□□□ 0.65
ABCA2-201ENST00000265662 ZBTB47Q9UFB7 747 aaPredicted RBP19.06■□□□□ 0.64
ABCA2-201ENST00000265662 TRIM52Q96A61 297 aa19.04■□□□□ 0.64
ABCA2-201ENST00000265662 RTN4Q9NQC3 1192 aaKnown RBP19.03■□□□□ 0.64
ABCA2-201ENST00000265662 IRX6P78412 446 aaPredicted RBP19■□□□□ 0.63
ABCA2-201ENST00000265662 HNRNPUQ00839 825 aaKnown RBP eCLIP19■□□□□ 0.63
ABCA2-201ENST00000265662 ZNF326Q5BKZ1 582 aaKnown RBP18.94■□□□□ 0.62
ABCA2-201ENST00000265662 DDX10Q13206 875 aaKnown RBP18.93■□□□□ 0.62
ABCA2-201ENST00000265662 ANP32BQ92688 251 aaKnown RBP18.92■□□□□ 0.62
ABCA2-201ENST00000265662 CANXP27824 592 aaKnown RBP18.91■□□□□ 0.62
ABCA2-201ENST00000265662 CCDC136Q96JN2 1154 aa18.86■□□□□ 0.61
ABCA2-201ENST00000265662 CCDC180Q9P1Z9 1646 aa18.86■□□□□ 0.61
ABCA2-201ENST00000265662 FAM9BQ8IZU0 186 aa18.85■□□□□ 0.61
ABCA2-201ENST00000265662 MYO15BQ96JP2 1530 aa18.81■□□□□ 0.6
ABCA2-201ENST00000265662 HSP90AA1P07900 732 aaKnown RBP18.79■□□□□ 0.6
ABCA2-201ENST00000265662 CSRNP3Q8WYN3 585 aa18.78■□□□□ 0.6
ABCA2-201ENST00000265662 SALL2Q9Y467 1007 aaPredicted RBP18.76■□□□□ 0.59
ABCA2-201ENST00000265662 SUPT16HQ9Y5B9 1047 aaKnown RBP18.74■□□□□ 0.59
ABCA2-201ENST00000265662 DEKP35659 375 aaKnown RBP18.72■□□□□ 0.59
ABCA2-201ENST00000265662 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.69■□□□□ 0.58
ABCA2-201ENST00000265662 UPF2Q9HAU5 1272 aaKnown RBP18.69■□□□□ 0.58
ABCA2-201ENST00000265662 HIRIP3Q9BW71 556 aaPredicted RBP18.66■□□□□ 0.58
ABCA2-201ENST00000265662 NEFMP07197 916 aa18.65■□□□□ 0.58
ABCA2-201ENST00000265662 LAS1LQ9Y4W2 734 aaKnown RBP18.61■□□□□ 0.57
ABCA2-201ENST00000265662 NAP1L5Q96NT1 182 aaPredicted RBP18.61■□□□□ 0.57
ABCA2-201ENST00000265662 NOP58Q9Y2X3 529 aaKnown RBP18.58■□□□□ 0.57
ABCA2-201ENST00000265662 TRIM44Q96DX7 344 aaPredicted RBP18.58■□□□□ 0.56
ABCA2-201ENST00000265662 RBM19Q9Y4C8 960 aaKnown RBP18.57■□□□□ 0.56
ABCA2-201ENST00000265662 TONSLQ96HA7 1378 aa18.56■□□□□ 0.56
ABCA2-201ENST00000265662 ERICH6BQ5W0A0 696 aa18.52■□□□□ 0.56
ABCA2-201ENST00000265662 MRS2Q9HD23 443 aa18.51■□□□□ 0.55
ABCA2-201ENST00000265662 DDRGK1Q96HY6 314 aa18.49■□□□□ 0.55
ABCA2-201ENST00000265662 TMC1Q8TDI8 760 aa18.49■□□□□ 0.55
ABCA2-201ENST00000265662 SENP3-EIF4A1A0A087X0R7 540 aa18.49■□□□□ 0.55
ABCA2-201ENST00000265662 TNNT2P45379 298 aaPredicted RBP18.48■□□□□ 0.55
ABCA2-201ENST00000265662 SLC24A1O60721 1099 aa18.47■□□□□ 0.55
ABCA2-201ENST00000265662 TSHZ2Q9NRE2 1034 aa18.45■□□□□ 0.54
ABCA2-201ENST00000265662 P3H3Q8IVL6 736 aa18.41■□□□□ 0.54
ABCA2-201ENST00000265662 ARID4BQ4LE39 1312 aaPredicted RBP18.41■□□□□ 0.54
ABCA2-201ENST00000265662 PPM1GO15355 546 aaPredicted RBP18.39■□□□□ 0.53
ABCA2-201ENST00000265662 B4GALNT3Q6L9W6 998 aa18.39■□□□□ 0.53
ABCA2-201ENST00000265662 AMER1Q5JTC6 1135 aaPredicted RBP18.38■□□□□ 0.53
ABCA2-201ENST00000265662 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.38■□□□□ 0.53
ABCA2-201ENST00000265662 BECN1Q14457 450 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms