RNA–Protein interactions for RNA: ENST00000491221.1

ATP13A1-210, Transcript of ATPase 13A1, humanhuman

TSL 2

Gene ATP13A1, Length 937 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A1-210ENST00000491221 NISCHQ9Y2I1 1504 aa34.26■■■■□ 3.08
ATP13A1-210ENST00000491221 ABCC9O60706 1549 aa30.86■■■□□ 2.53
ATP13A1-210ENST00000491221 CCDC180Q9P1Z9 1646 aa30.76■■■□□ 2.51
ATP13A1-210ENST00000491221 RB1CC1Q8TDY2 1594 aa29.35■■■□□ 2.29
ATP13A1-210ENST00000491221 NACADO15069 1562 aa29.12■■■□□ 2.25
ATP13A1-210ENST00000491221 DCAF8L2P0C7V8 631 aa29.05■■■□□ 2.24
ATP13A1-210ENST00000491221 DNAJC5BQ9UF47 199 aa28.94■■■□□ 2.22
ATP13A1-210ENST00000491221 PABPN1Q86U42 306 aaKnown RBP eCLIP28.74■■■□□ 2.191e-7■□□□□ 8.7
ATP13A1-210ENST00000491221 MYO15BQ96JP2 1530 aa28.68■■■□□ 2.18
ATP13A1-210ENST00000491221 UNC13AQ9UPW8 1703 aa28.6■■■□□ 2.17
ATP13A1-210ENST00000491221 BICRAQ9NZM4 1560 aa28.42■■■□□ 2.14
ATP13A1-210ENST00000491221 ZCCHC6Q5VYS8 1495 aaKnown RBP28.38■■■□□ 2.13
ATP13A1-210ENST00000491221 DCAF1Q9Y4B6 1507 aa28.29■■■□□ 2.12
ATP13A1-210ENST00000491221 SHROOM4Q9ULL8 1493 aa28.09■■■□□ 2.09
ATP13A1-210ENST00000491221 SCRIBQ14160 1630 aa28.06■■■□□ 2.08
ATP13A1-210ENST00000491221 CC2D2AQ9P2K1 1620 aa27.85■■■□□ 2.05
ATP13A1-210ENST00000491221 CECR2Q9BXF3 1484 aa27.81■■■□□ 2.04
ATP13A1-210ENST00000491221 EIF4G1Q04637 1599 aaKnown RBP27.77■■■□□ 2.04
ATP13A1-210ENST00000491221 NCAPD3P42695 1498 aa26.87■■□□□ 1.89
ATP13A1-210ENST00000491221 ATAD2BQ9ULI0 1458 aa26.79■■□□□ 1.88
ATP13A1-210ENST00000491221 SMARCA4P51532 1647 aa26.74■■□□□ 1.87
ATP13A1-210ENST00000491221 SMARCA2P51531 1590 aa26.73■■□□□ 1.87
ATP13A1-210ENST00000491221 ERCC6Q03468 1493 aa26.7■■□□□ 1.87
ATP13A1-210ENST00000491221 HMGXB3Q12766 1538 aa26.67■■□□□ 1.86
ATP13A1-210ENST00000491221 DNAJC5Q9H3Z4 198 aa26.66■■□□□ 1.86
ATP13A1-210ENST00000491221 CUX2O14529 1486 aa26.62■■□□□ 1.85
ATP13A1-210ENST00000491221 BAZ1AQ9NRL2 1556 aaPredicted RBP26.62■■□□□ 1.85
ATP13A1-210ENST00000491221 BAZ1BQ9UIG0 1483 aaKnown RBP26.56■■□□□ 1.84
ATP13A1-210ENST00000491221 NESP48681 1621 aa26.47■■□□□ 1.83
ATP13A1-210ENST00000491221 PEG3Q9GZU2 1588 aa26.46■■□□□ 1.83
ATP13A1-210ENST00000491221 MROH2BQ7Z745 1585 aa26.38■■□□□ 1.81
ATP13A1-210ENST00000491221 LAMC3Q9Y6N6 1575 aa26.29■■□□□ 1.8
ATP13A1-210ENST00000491221 THOC2Q8NI27 1593 aaKnown RBP26.19■■□□□ 1.78
ATP13A1-210ENST00000491221 PDS5BQ9NTI5 1447 aa26.18■■□□□ 1.78
ATP13A1-210ENST00000491221 KIF21AQ7Z4S6 1674 aa26.11■■□□□ 1.77
ATP13A1-210ENST00000491221 CADPSQ9ULU8 1353 aa26.07■■□□□ 1.76
ATP13A1-210ENST00000491221 WIZO95785 1651 aa26.06■■□□□ 1.76
ATP13A1-210ENST00000491221 MRC2Q9UBG0 1479 aa25.93■■□□□ 1.74
ATP13A1-210ENST00000491221 WDR62O43379 1518 aa25.84■■□□□ 1.73
ATP13A1-210ENST00000491221 RSF1Q96T23 1441 aaPredicted RBP25.83■■□□□ 1.73
ATP13A1-210ENST00000491221 CEP164Q9UPV0 1460 aa25.83■■□□□ 1.73
ATP13A1-210ENST00000491221 FANCD2Q9BXW9 1451 aa25.79■■□□□ 1.72
ATP13A1-210ENST00000491221 TOP2AP11388 1531 aaKnown RBP25.76■■□□□ 1.71
ATP13A1-210ENST00000491221 CFTRP13569 1480 aa25.75■■□□□ 1.71
ATP13A1-210ENST00000491221 URB2Q14146 1524 aaKnown RBP25.54■■□□□ 1.68
ATP13A1-210ENST00000491221 TRIM41Q8WV44 630 aa25.54■■□□□ 1.68
ATP13A1-210ENST00000491221 CCDC88BA6NC98 1476 aa25.47■■□□□ 1.67
ATP13A1-210ENST00000491221 PRDM2Q13029 1718 aa25.46■■□□□ 1.67
ATP13A1-210ENST00000491221 OSCARQ8IYS5 282 aa25.43■■□□□ 1.66
ATP13A1-210ENST00000491221 IFT140Q96RY7 1462 aa25.32■■□□□ 1.64
ATP13A1-210ENST00000491221 TOPBP1Q92547 1522 aa25.27■■□□□ 1.64
ATP13A1-210ENST00000491221 ABCC8Q09428 1581 aa25.25■■□□□ 1.63
ATP13A1-210ENST00000491221 ZNF608Q9ULD9 1512 aaPredicted RBP25.24■■□□□ 1.63
ATP13A1-210ENST00000491221 DNMBPQ6XZF7 1577 aa25.18■■□□□ 1.62
ATP13A1-210ENST00000491221 EIF4G3O43432 1585 aaKnown RBP25.1■■□□□ 1.61
ATP13A1-210ENST00000491221 RIMBP3CA6NJZ7 1639 aa25.05■■□□□ 1.6
ATP13A1-210ENST00000491221 RIMBP3BA6NNM3 1639 aa25.05■■□□□ 1.6
ATP13A1-210ENST00000491221 RIMBP3Q9UFD9 1639 aa25.05■■□□□ 1.6
ATP13A1-210ENST00000491221 AQRO60306 1485 aaKnown RBP eCLIP25.03■■□□□ 1.66e-8■■■□□ 14.7
ATP13A1-210ENST00000491221 TARBP1Q13395 1621 aaKnown RBP25.02■■□□□ 1.6
ATP13A1-210ENST00000491221 POLA1P09884 1462 aaPredicted RBP25.02■■□□□ 1.6
ATP13A1-210ENST00000491221 ARHGEF11O15085 1522 aa24.98■■□□□ 1.59
ATP13A1-210ENST00000491221 FBLN2P98095 1184 aa24.95■■□□□ 1.58
ATP13A1-210ENST00000491221 RAD54L2Q9Y4B4 1467 aa24.93■■□□□ 1.58
ATP13A1-210ENST00000491221 CHD1O14646 1710 aa24.92■■□□□ 1.58
ATP13A1-210ENST00000491221 SOGA1O94964 1423 aa24.92■■□□□ 1.58
ATP13A1-210ENST00000491221 TDRD9Q8NDG6 1382 aaKnown RBP24.88■■□□□ 1.57
ATP13A1-210ENST00000491221 FGD5Q6ZNL6 1462 aa24.85■■□□□ 1.57
ATP13A1-210ENST00000491221 CYB5RLQ6IPT4 315 aa24.84■■□□□ 1.57
ATP13A1-210ENST00000491221 CUX1P39880 1505 aa24.81■■□□□ 1.56
ATP13A1-210ENST00000491221 WDR97A6NE52 1622 aa24.8■■□□□ 1.56
ATP13A1-210ENST00000491221 SNAPC4Q5SXM2 1469 aa24.78■■□□□ 1.56
ATP13A1-210ENST00000491221 CHMP7Q8WUX9 453 aaPredicted RBP24.75■■□□□ 1.55
ATP13A1-210ENST00000491221 SUPT5HO00267 1087 aaKnown RBP24.73■■□□□ 1.55
ATP13A1-210ENST00000491221 ARAP1Q96P48 1450 aa24.72■■□□□ 1.55
ATP13A1-210ENST00000491221 GRIN2BQ13224 1484 aa24.71■■□□□ 1.55
ATP13A1-210ENST00000491221 MAGI1Q96QZ7 1491 aaPredicted RBP24.71■■□□□ 1.55
ATP13A1-210ENST00000491221 SYNJ1O43426 1573 aa24.67■■□□□ 1.54
ATP13A1-210ENST00000491221 CLASP1Q7Z460 1538 aa24.63■■□□□ 1.53
ATP13A1-210ENST00000491221 TRHP20396 242 aaPredicted RBP24.63■■□□□ 1.53
ATP13A1-210ENST00000491221 SYNJ2O15056 1496 aa24.63■■□□□ 1.53
ATP13A1-210ENST00000491221 GAPVD1Q14C86 1478 aa24.62■■□□□ 1.53
ATP13A1-210ENST00000491221 PBRM1Q86U86 1689 aa24.58■■□□□ 1.53
ATP13A1-210ENST00000491221 ABCA10Q8WWZ4 1543 aa24.56■■□□□ 1.52
ATP13A1-210ENST00000491221 ABCA5Q8WWZ7 1642 aa24.51■■□□□ 1.51
ATP13A1-210ENST00000491221 WRNQ14191 1432 aaPredicted RBP eCLIP24.5■■□□□ 1.51
ATP13A1-210ENST00000491221 TOP2BQ02880 1626 aa24.39■■□□□ 1.5
ATP13A1-210ENST00000491221 GRIN2AQ12879 1464 aa24.38■■□□□ 1.49
ATP13A1-210ENST00000491221 BIVM-ERCC5R4GMW8 1640 aa24.38■■□□□ 1.49
ATP13A1-210ENST00000491221 ADAMTS12P58397 1594 aa24.35■■□□□ 1.49
ATP13A1-210ENST00000491221 FHAD1B1AJZ9 1412 aa24.31■■□□□ 1.48
ATP13A1-210ENST00000491221 NUP160Q12769 1436 aa24.29■■□□□ 1.48
ATP13A1-210ENST00000491221 CEP170Q5SW79 1584 aa24.27■■□□□ 1.48
ATP13A1-210ENST00000491221 ERICH3Q5RHP9 1530 aa24.26■■□□□ 1.47
ATP13A1-210ENST00000491221 ERCC6L2Q5T890 1561 aa24.23■■□□□ 1.47
ATP13A1-210ENST00000491221 SHROOM2Q13796 1616 aa24.16■■□□□ 1.46
ATP13A1-210ENST00000491221 PRG4Q92954 1404 aaPredicted RBP24.1■■□□□ 1.45
ATP13A1-210ENST00000491221 JPH4Q96JJ6 628 aa24.08■■□□□ 1.45
ATP13A1-210ENST00000491221 RUSC2Q8N2Y8 1516 aa24■■□□□ 1.43
ATP13A1-210ENST00000491221 AEBP2Q6ZN18 517 aaPredicted RBP23.98■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms