RNA–Protein interactions for RNA: ENST00000459850.5

ABCA2-208, Transcript of ATP binding cassette subfamily A member 2, humanhuman

TSL 1 (best)

Gene ABCA2, Length 8,073 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA2-208ENST00000459850 DCAF8L2P0C7V8 631 aa20.58■□□□□ 0.89
ABCA2-208ENST00000459850 PELP1Q8IZL8 1130 aaKnown RBP19.61■□□□□ 0.73
ABCA2-208ENST00000459850 NISCHQ9Y2I1 1504 aa19.3■□□□□ 0.68
ABCA2-208ENST00000459850 SUPT5HO00267 1087 aaKnown RBP19.22■□□□□ 0.67
ABCA2-208ENST00000459850 EHMT2Q96KQ7 1210 aa19.21■□□□□ 0.67
ABCA2-208ENST00000459850 FAM9AQ8IZU1 332 aaPredicted RBP19.07■□□□□ 0.64
ABCA2-208ENST00000459850 ERICH6Q7L0X2 663 aa19.01■□□□□ 0.63
ABCA2-208ENST00000459850 APLP2Q06481 763 aa18.93■□□□□ 0.62
ABCA2-208ENST00000459850 SHROOM4Q9ULL8 1493 aa18.88■□□□□ 0.61
ABCA2-208ENST00000459850 CCER1Q8TC90 406 aaPredicted RBP18.76■□□□□ 0.59
ABCA2-208ENST00000459850 TTBK1Q5TCY1 1321 aaPredicted RBP18.55■□□□□ 0.56
ABCA2-208ENST00000459850 ATP1B4Q9UN42 357 aaPredicted RBP18.46■□□□□ 0.55
ABCA2-208ENST00000459850 MYT1Q01538 1121 aa18.37■□□□□ 0.53
ABCA2-208ENST00000459850 RANGAP1P46060 587 aaPredicted RBP18.36■□□□□ 0.53
ABCA2-208ENST00000459850 NEFLP07196 543 aa18.19■□□□□ 0.5
ABCA2-208ENST00000459850 DAXXQ9UER7 740 aaPredicted RBP18.18■□□□□ 0.5
ABCA2-208ENST00000459850 MYT1LQ9UL68 1186 aa18.15■□□□□ 0.5
ABCA2-208ENST00000459850 CENPBP07199 599 aaPredicted RBP18.12■□□□□ 0.49
ABCA2-208ENST00000459850 PCGF6Q9BYE7 350 aa18.12■□□□□ 0.49
ABCA2-208ENST00000459850 CHIC1Q5VXU3 224 aa17.99■□□□□ 0.47
ABCA2-208ENST00000459850 SLC4A1APQ9BWU0 796 aaKnown RBP17.88■□□□□ 0.45
ABCA2-208ENST00000459850 POLR3GLQ9BT43 218 aa17.87■□□□□ 0.45
ABCA2-208ENST00000459850 YTHDC1Q96MU7 727 aaKnown RBP17.86■□□□□ 0.45
ABCA2-208ENST00000459850 TRIM41Q8WV44 630 aa17.84■□□□□ 0.45
ABCA2-208ENST00000459850 ZEB1P37275 1124 aaPredicted RBP17.83■□□□□ 0.45
ABCA2-208ENST00000459850 UBTFP17480 764 aaKnown RBP17.75■□□□□ 0.43
ABCA2-208ENST00000459850 CNGB1Q14028 1251 aaPredicted RBP17.68■□□□□ 0.42
ABCA2-208ENST00000459850 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.66■□□□□ 0.42
ABCA2-208ENST00000459850 HNRNPUL2Q1KMD3 747 aaKnown RBP17.66■□□□□ 0.42
ABCA2-208ENST00000459850 ZNF316A6NFI3 1004 aaPredicted RBP17.65■□□□□ 0.42
ABCA2-208ENST00000459850 CLSPNQ9HAW4 1339 aa17.61■□□□□ 0.41
ABCA2-208ENST00000459850 SLC24A1O60721 1099 aa17.5■□□□□ 0.39
ABCA2-208ENST00000459850 ITGAEP38570 1179 aa17.4■□□□□ 0.38
ABCA2-208ENST00000459850 RTL5Q5HYW3 569 aaPredicted RBP17.38■□□□□ 0.37
ABCA2-208ENST00000459850 ZBTB47Q9UFB7 747 aaPredicted RBP17.36■□□□□ 0.37
ABCA2-208ENST00000459850 PPARGC1BQ86YN6 1023 aaKnown RBP17.34■□□□□ 0.37
ABCA2-208ENST00000459850 BCL11AQ9H165 835 aa17.34■□□□□ 0.37
ABCA2-208ENST00000459850 TRIM26Q12899 539 aaPredicted RBP17.19■□□□□ 0.34
ABCA2-208ENST00000459850 BCANQ96GW7 911 aa17.18■□□□□ 0.34
ABCA2-208ENST00000459850 CANXP27824 592 aaKnown RBP17.01■□□□□ 0.31
ABCA2-208ENST00000459850 NEFMP07197 916 aa16.98■□□□□ 0.31
ABCA2-208ENST00000459850 HRCP23327 699 aa16.92■□□□□ 0.3
ABCA2-208ENST00000459850 TRIM52Q96A61 297 aa16.86■□□□□ 0.29
ABCA2-208ENST00000459850 LOC105371045A0A1W2PR82 267 aa16.85■□□□□ 0.29
ABCA2-208ENST00000459850 PLPPR3Q6T4P5 718 aa16.85■□□□□ 0.29
ABCA2-208ENST00000459850 CDK11BP21127 795 aaKnown RBP16.84■□□□□ 0.29
ABCA2-208ENST00000459850 CDK11AQ9UQ88 783 aaPredicted RBP16.84■□□□□ 0.29
ABCA2-208ENST00000459850 ZNF326Q5BKZ1 582 aaKnown RBP16.82■□□□□ 0.28
ABCA2-208ENST00000459850 FAM50AQ14320 339 aaKnown RBP16.82■□□□□ 0.28
ABCA2-208ENST00000459850 ANP32BQ92688 251 aaKnown RBP16.79■□□□□ 0.28
ABCA2-208ENST00000459850 HSP90AA1P07900 732 aaKnown RBP16.73■□□□□ 0.27
ABCA2-208ENST00000459850 A0A0G2JS52 829 aa16.73■□□□□ 0.27
ABCA2-208ENST00000459850 ESF1Q9H501 851 aaKnown RBP16.71■□□□□ 0.27
ABCA2-208ENST00000459850 NEUROD1Q13562 356 aa16.69■□□□□ 0.26
ABCA2-208ENST00000459850 SCAF1Q9H7N4 1312 aaKnown RBP16.68■□□□□ 0.26
ABCA2-208ENST00000459850 DIEXFQ68CQ4 756 aaKnown RBP16.65■□□□□ 0.26
ABCA2-208ENST00000459850 FBLN2P98095 1184 aa16.65■□□□□ 0.26
ABCA2-208ENST00000459850 TULP1O00294 542 aaPredicted RBP16.59■□□□□ 0.25
ABCA2-208ENST00000459850 STAG3Q9UJ98 1225 aa16.59■□□□□ 0.25
ABCA2-208ENST00000459850 PABPN1Q86U42 306 aaKnown RBP eCLIP16.58■□□□□ 0.247e-6■□□□□ 8.8
ABCA2-208ENST00000459850 EIF5BO60841 1220 aaKnown RBP16.57■□□□□ 0.24
ABCA2-208ENST00000459850 ABCC9O60706 1549 aa16.57■□□□□ 0.24
ABCA2-208ENST00000459850 ANP32CO43423 234 aa16.55■□□□□ 0.24
ABCA2-208ENST00000459850 NPM2Q86SE8 214 aaKnown RBP16.55■□□□□ 0.24
ABCA2-208ENST00000459850 ANP32AP39687 249 aaKnown RBP16.52■□□□□ 0.23
ABCA2-208ENST00000459850 CCDC180Q9P1Z9 1646 aa16.49■□□□□ 0.23
ABCA2-208ENST00000459850 NCBP3Q53F19 620 aaKnown RBP16.48■□□□□ 0.23
ABCA2-208ENST00000459850 UPF2Q9HAU5 1272 aaKnown RBP16.45■□□□□ 0.22
ABCA2-208ENST00000459850 CHGAP10645 457 aaKnown RBP16.41■□□□□ 0.22
ABCA2-208ENST00000459850 GLIPR1L2Q4G1C9 344 aa16.4■□□□□ 0.22
ABCA2-208ENST00000459850 PLEKHG5O94827 1062 aa16.4■□□□□ 0.22
ABCA2-208ENST00000459850 ARXQ96QS3 562 aa16.39■□□□□ 0.21
ABCA2-208ENST00000459850 ZBTB7CA1YPR0 619 aa16.35■□□□□ 0.21
ABCA2-208ENST00000459850 ARID3CA6NKF2 412 aa16.31■□□□□ 0.2
ABCA2-208ENST00000459850 P3H3Q8IVL6 736 aa16.28■□□□□ 0.2
ABCA2-208ENST00000459850 ZNF777Q9ULD5 760 aaPredicted RBP16.28■□□□□ 0.2
ABCA2-208ENST00000459850 C14orf37Q86TY3 774 aa16.26■□□□□ 0.19
ABCA2-208ENST00000459850 GTF3C3Q9Y5Q9 886 aa16.24■□□□□ 0.19
ABCA2-208ENST00000459850 HAP1P54257 671 aaPredicted RBP16.24■□□□□ 0.19
ABCA2-208ENST00000459850 NPHP1O15259 732 aa16.24■□□□□ 0.19
ABCA2-208ENST00000459850 MYH16Q9H6N6 1097 aa16.2■□□□□ 0.18
ABCA2-208ENST00000459850 ZRSR1Q15695 479 aaKnown RBP16.17■□□□□ 0.18
ABCA2-208ENST00000459850 SALL2Q9Y467 1007 aaPredicted RBP16.16■□□□□ 0.18
ABCA2-208ENST00000459850 CLSTN1O94985 981 aa16.16■□□□□ 0.18
ABCA2-208ENST00000459850 NPM1P06748 294 aaKnown RBP eCLIP16.15■□□□□ 0.18
ABCA2-208ENST00000459850 TAOK2Q9UL54 1235 aa16.12■□□□□ 0.17
ABCA2-208ENST00000459850 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.12■□□□□ 0.17
ABCA2-208ENST00000459850 NCLP19338 710 aaKnown RBP16.11■□□□□ 0.17
ABCA2-208ENST00000459850 TPRNQ4KMQ1 711 aa16.1■□□□□ 0.17
ABCA2-208ENST00000459850 SENP3Q9H4L4 574 aaPredicted RBP16.09■□□□□ 0.17
ABCA2-208ENST00000459850 PRM3Q9NNZ6 103 aa16.08■□□□□ 0.17
ABCA2-208ENST00000459850 SCRIBQ14160 1630 aa16.08■□□□□ 0.16
ABCA2-208ENST00000459850 NBR1Q14596 966 aa16.07■□□□□ 0.16
ABCA2-208ENST00000459850 CSRNP3Q8WYN3 585 aa16.07■□□□□ 0.16
ABCA2-208ENST00000459850 TRIM44Q96DX7 344 aaPredicted RBP16.06■□□□□ 0.16
ABCA2-208ENST00000459850 TONSLQ96HA7 1378 aa16.05■□□□□ 0.16
ABCA2-208ENST00000459850 WDR43Q15061 677 aaKnown RBP eCLIP16.03■□□□□ 0.16
ABCA2-208ENST00000459850 TNNT2P45379 298 aaPredicted RBP16.03■□□□□ 0.16
ABCA2-208ENST00000459850 ZCCHC6Q5VYS8 1495 aaKnown RBP16.01■□□□□ 0.15
ABCA2-208ENST00000459850 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.01■□□□□ 0.151e-6■□□□□ 9.5
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms