RNA–Protein interactions for RNA: ENST00000464520.1

ABCA2-211, Transcript of ATP binding cassette subfamily A member 2, humanhuman

TSL 2

Gene ABCA2, Length 886 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA2-211ENST00000464520 NISCHQ9Y2I1 1504 aa60.24■■■■■ 7.23
ABCA2-211ENST00000464520 CCDC180Q9P1Z9 1646 aa53.64■■■■■ 6.18
ABCA2-211ENST00000464520 ABCC9O60706 1549 aa52.88■■■■■ 6.06
ABCA2-211ENST00000464520 RB1CC1Q8TDY2 1594 aa50.74■■■■■ 5.71
ABCA2-211ENST00000464520 NACADO15069 1562 aa50.64■■■■■ 5.7
ABCA2-211ENST00000464520 DCAF8L2P0C7V8 631 aa50.57■■■■■ 5.69
ABCA2-211ENST00000464520 MYO15BQ96JP2 1530 aa50.27■■■■■ 5.64
ABCA2-211ENST00000464520 ZCCHC6Q5VYS8 1495 aaKnown RBP50.06■■■■■ 5.6
ABCA2-211ENST00000464520 DCAF1Q9Y4B6 1507 aa49.88■■■■■ 5.58
ABCA2-211ENST00000464520 PABPN1Q86U42 306 aaKnown RBP eCLIP49.43■■■■■ 5.51e-5■□□□□ 8.6
ABCA2-211ENST00000464520 UNC13AQ9UPW8 1703 aa49.37■■■■■ 5.49
ABCA2-211ENST00000464520 BICRAQ9NZM4 1560 aa49.15■■■■■ 5.46
ABCA2-211ENST00000464520 DNAJC5BQ9UF47 199 aa48.96■■■■■ 5.43
ABCA2-211ENST00000464520 SCRIBQ14160 1630 aa48.85■■■■■ 5.41
ABCA2-211ENST00000464520 SHROOM4Q9ULL8 1493 aa48.76■■■■■ 5.4
ABCA2-211ENST00000464520 EIF4G1Q04637 1599 aaKnown RBP47.92■■■■■ 5.26
ABCA2-211ENST00000464520 CC2D2AQ9P2K1 1620 aa47.79■■■■■ 5.24
ABCA2-211ENST00000464520 CECR2Q9BXF3 1484 aa47.61■■■■■ 5.21
ABCA2-211ENST00000464520 NCAPD3P42695 1498 aa46.78■■■■■ 5.08
ABCA2-211ENST00000464520 SMARCA4P51532 1647 aa46.75■■■■■ 5.07
ABCA2-211ENST00000464520 BAZ1AQ9NRL2 1556 aaPredicted RBP46.72■■■■■ 5.07
ABCA2-211ENST00000464520 ATAD2BQ9ULI0 1458 aa46.69■■■■■ 5.06
ABCA2-211ENST00000464520 SMARCA2P51531 1590 aa46.61■■■■■ 5.05
ABCA2-211ENST00000464520 HMGXB3Q12766 1538 aa46.42■■■■■ 5.02
ABCA2-211ENST00000464520 MROH2BQ7Z745 1585 aa46.37■■■■■ 5.01
ABCA2-211ENST00000464520 PEG3Q9GZU2 1588 aa46.37■■■■■ 5.01
ABCA2-211ENST00000464520 BAZ1BQ9UIG0 1483 aaKnown RBP46.26■■■■■ 5
ABCA2-211ENST00000464520 WIZO95785 1651 aa45.78■■■■■ 4.92
ABCA2-211ENST00000464520 RSF1Q96T23 1441 aaPredicted RBP45.77■■■■■ 4.92
ABCA2-211ENST00000464520 ERCC6Q03468 1493 aa45.67■■■■■ 4.9
ABCA2-211ENST00000464520 NESP48681 1621 aa45.62■■■■■ 4.89
ABCA2-211ENST00000464520 LAMC3Q9Y6N6 1575 aa45.52■■■■■ 4.88
ABCA2-211ENST00000464520 CADPSQ9ULU8 1353 aa45.41■■■■■ 4.86
ABCA2-211ENST00000464520 CUX2O14529 1486 aa45.36■■■■■ 4.85
ABCA2-211ENST00000464520 TOP2AP11388 1531 aaKnown RBP45.34■■■■■ 4.85
ABCA2-211ENST00000464520 PDS5BQ9NTI5 1447 aa45.34■■■■■ 4.85
ABCA2-211ENST00000464520 CFTRP13569 1480 aa45.02■■■■■ 4.8
ABCA2-211ENST00000464520 KIF21AQ7Z4S6 1674 aa44.96■■■■■ 4.79
ABCA2-211ENST00000464520 THOC2Q8NI27 1593 aaKnown RBP44.96■■■■■ 4.79
ABCA2-211ENST00000464520 CCDC88BA6NC98 1476 aa44.86■■■■■ 4.77
ABCA2-211ENST00000464520 FANCD2Q9BXW9 1451 aa44.8■■■■■ 4.76
ABCA2-211ENST00000464520 MRC2Q9UBG0 1479 aa44.79■■■■■ 4.76
ABCA2-211ENST00000464520 CEP164Q9UPV0 1460 aa44.77■■■■■ 4.76
ABCA2-211ENST00000464520 WDR62O43379 1518 aa44.63■■■■■ 4.73
ABCA2-211ENST00000464520 DNAJC5Q9H3Z4 198 aa44.51■■■■■ 4.72
ABCA2-211ENST00000464520 PRDM2Q13029 1718 aa44.41■■■■■ 4.7
ABCA2-211ENST00000464520 SUPT5HO00267 1087 aaKnown RBP44.35■■■■■ 4.69
ABCA2-211ENST00000464520 URB2Q14146 1524 aaKnown RBP44.33■■■■■ 4.69
ABCA2-211ENST00000464520 ABCC8Q09428 1581 aa44.12■■■■■ 4.65
ABCA2-211ENST00000464520 TOPBP1Q92547 1522 aa44.03■■■■■ 4.64
ABCA2-211ENST00000464520 DNMBPQ6XZF7 1577 aa43.92■■■■■ 4.62
ABCA2-211ENST00000464520 IFT140Q96RY7 1462 aa43.9■■■■■ 4.62
ABCA2-211ENST00000464520 ZNF608Q9ULD9 1512 aaPredicted RBP43.65■■■■■ 4.58
ABCA2-211ENST00000464520 POLA1P09884 1462 aaPredicted RBP43.63■■■■■ 4.57
ABCA2-211ENST00000464520 SOGA1O94964 1423 aa43.53■■■■■ 4.56
ABCA2-211ENST00000464520 TARBP1Q13395 1621 aaKnown RBP43.52■■■■■ 4.56
ABCA2-211ENST00000464520 OSCARQ8IYS5 282 aa43.52■■■■■ 4.56
ABCA2-211ENST00000464520 CUX1P39880 1505 aa43.52■■■■■ 4.56
ABCA2-211ENST00000464520 FGD5Q6ZNL6 1462 aa43.45■■■■■ 4.55
ABCA2-211ENST00000464520 RAD54L2Q9Y4B4 1467 aa43.43■■■■■ 4.54
ABCA2-211ENST00000464520 AQRO60306 1485 aaKnown RBP eCLIP43.4■■■■■ 4.541e-11■■■■■ 28.5
ABCA2-211ENST00000464520 EIF4G3O43432 1585 aaKnown RBP43.39■■■■■ 4.54
ABCA2-211ENST00000464520 TDRD9Q8NDG6 1382 aaKnown RBP43.29■■■■■ 4.52
ABCA2-211ENST00000464520 WDR97A6NE52 1622 aa43.24■■■■■ 4.51
ABCA2-211ENST00000464520 WRNQ14191 1432 aaPredicted RBP eCLIP43.18■■■■■ 4.5
ABCA2-211ENST00000464520 ABCA10Q8WWZ4 1543 aa43.07■■■■■ 4.48
ABCA2-211ENST00000464520 TOP2BQ02880 1626 aa43.05■■■■■ 4.48
ABCA2-211ENST00000464520 GRIN2BQ13224 1484 aa43.04■■■■■ 4.48
ABCA2-211ENST00000464520 FBLN2P98095 1184 aa43.02■■■■■ 4.48
ABCA2-211ENST00000464520 BIVM-ERCC5R4GMW8 1640 aa43■■■■■ 4.47
ABCA2-211ENST00000464520 GAPVD1Q14C86 1478 aa42.98■■■■■ 4.47
ABCA2-211ENST00000464520 SYNJ1O43426 1573 aa42.95■■■■■ 4.47
ABCA2-211ENST00000464520 SNAPC4Q5SXM2 1469 aa42.95■■■■■ 4.47
ABCA2-211ENST00000464520 MAGI1Q96QZ7 1491 aaPredicted RBP42.95■■■■■ 4.47
ABCA2-211ENST00000464520 CHMP7Q8WUX9 453 aaPredicted RBP42.9■■■■■ 4.46
ABCA2-211ENST00000464520 CHD1O14646 1710 aa42.85■■■■■ 4.45
ABCA2-211ENST00000464520 ABCA5Q8WWZ7 1642 aa42.82■■■■■ 4.44
ABCA2-211ENST00000464520 SYNJ2O15056 1496 aa42.79■■■■■ 4.44
ABCA2-211ENST00000464520 TRIM41Q8WV44 630 aa42.77■■■■■ 4.44
ABCA2-211ENST00000464520 PBRM1Q86U86 1689 aa42.71■■■■■ 4.43
ABCA2-211ENST00000464520 ARHGEF11O15085 1522 aa42.64■■■■■ 4.42
ABCA2-211ENST00000464520 RIMBP3CA6NJZ7 1639 aa42.62■■■■■ 4.41
ABCA2-211ENST00000464520 RIMBP3BA6NNM3 1639 aa42.62■■■■■ 4.41
ABCA2-211ENST00000464520 RIMBP3Q9UFD9 1639 aa42.62■■■■■ 4.41
ABCA2-211ENST00000464520 ERICH3Q5RHP9 1530 aa42.54■■■■■ 4.4
ABCA2-211ENST00000464520 CLASP1Q7Z460 1538 aa42.51■■■■■ 4.39
ABCA2-211ENST00000464520 FHAD1B1AJZ9 1412 aa42.5■■■■■ 4.39
ABCA2-211ENST00000464520 GRIN2AQ12879 1464 aa42.43■■■■■ 4.38
ABCA2-211ENST00000464520 ADAMTS12P58397 1594 aa42.43■■■■■ 4.38
ABCA2-211ENST00000464520 CYB5RLQ6IPT4 315 aa42.38■■■■■ 4.37
ABCA2-211ENST00000464520 KIF27Q86VH2 1401 aa42.35■■■■■ 4.37
ABCA2-211ENST00000464520 NUP160Q12769 1436 aa42.29■■■■■ 4.36
ABCA2-211ENST00000464520 ARAP1Q96P48 1450 aa42.26■■■■■ 4.36
ABCA2-211ENST00000464520 IGF1RP08069 1367 aa42.25■■■■■ 4.35
ABCA2-211ENST00000464520 CEP170Q5SW79 1584 aa42.16■■■■■ 4.34
ABCA2-211ENST00000464520 CUL7Q14999 1698 aa42■■■■■ 4.31
ABCA2-211ENST00000464520 CARMIL1Q5VZK9 1371 aa41.98■■■■■ 4.31
ABCA2-211ENST00000464520 JPH4Q96JJ6 628 aa41.97■■■■■ 4.31
ABCA2-211ENST00000464520 SHROOM2Q13796 1616 aa41.93■■■■■ 4.3
ABCA2-211ENST00000464520 KIAA0586Q9BVV6 1533 aa41.84■■■■■ 4.29
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms