RNA–Protein interactions for RNA: ENST00000487109.5

ABCA2-218, Transcript of ATP binding cassette subfamily A member 2, humanhuman

TSL 1 (best)

Gene ABCA2, Length 8,031 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA2-218ENST00000487109 DCAF8L2P0C7V8 631 aa20.77■□□□□ 0.92
ABCA2-218ENST00000487109 PELP1Q8IZL8 1130 aaKnown RBP20.12■□□□□ 0.81
ABCA2-218ENST00000487109 NISCHQ9Y2I1 1504 aa19.99■□□□□ 0.79
ABCA2-218ENST00000487109 SUPT5HO00267 1087 aaKnown RBP19.49■□□□□ 0.71
ABCA2-218ENST00000487109 EHMT2Q96KQ7 1210 aa19.39■□□□□ 0.7
ABCA2-218ENST00000487109 ERICH6Q7L0X2 663 aa19.38■□□□□ 0.69
ABCA2-218ENST00000487109 APLP2Q06481 763 aa19.28■□□□□ 0.68
ABCA2-218ENST00000487109 FAM9AQ8IZU1 332 aaPredicted RBP19.23■□□□□ 0.67
ABCA2-218ENST00000487109 CCER1Q8TC90 406 aaPredicted RBP19.22■□□□□ 0.67
ABCA2-218ENST00000487109 SHROOM4Q9ULL8 1493 aa19.11■□□□□ 0.65
ABCA2-218ENST00000487109 CENPBP07199 599 aaPredicted RBP18.8■□□□□ 0.6
ABCA2-218ENST00000487109 TTBK1Q5TCY1 1321 aaPredicted RBP18.79■□□□□ 0.6
ABCA2-218ENST00000487109 NEFLP07196 543 aa18.65■□□□□ 0.58
ABCA2-218ENST00000487109 PCGF6Q9BYE7 350 aa18.63■□□□□ 0.57
ABCA2-218ENST00000487109 ATP1B4Q9UN42 357 aaPredicted RBP18.58■□□□□ 0.56
ABCA2-218ENST00000487109 MYT1Q01538 1121 aa18.56■□□□□ 0.56
ABCA2-218ENST00000487109 RANGAP1P46060 587 aaPredicted RBP18.52■□□□□ 0.55
ABCA2-218ENST00000487109 DAXXQ9UER7 740 aaPredicted RBP18.48■□□□□ 0.55
ABCA2-218ENST00000487109 ZEB1P37275 1124 aaPredicted RBP18.41■□□□□ 0.54
ABCA2-218ENST00000487109 YTHDC1Q96MU7 727 aaKnown RBP18.31■□□□□ 0.52
ABCA2-218ENST00000487109 TRIM41Q8WV44 630 aa18.29■□□□□ 0.52
ABCA2-218ENST00000487109 UBTFP17480 764 aaKnown RBP18.13■□□□□ 0.49
ABCA2-218ENST00000487109 MYT1LQ9UL68 1186 aa18.1■□□□□ 0.49
ABCA2-218ENST00000487109 POLR3GLQ9BT43 218 aa18.04■□□□□ 0.48
ABCA2-218ENST00000487109 ZNF316A6NFI3 1004 aaPredicted RBP17.97■□□□□ 0.47
ABCA2-218ENST00000487109 SLC4A1APQ9BWU0 796 aaKnown RBP17.9■□□□□ 0.46
ABCA2-218ENST00000487109 CLSPNQ9HAW4 1339 aa17.87■□□□□ 0.45
ABCA2-218ENST00000487109 RTL5Q5HYW3 569 aaPredicted RBP17.86■□□□□ 0.45
ABCA2-218ENST00000487109 CHIC1Q5VXU3 224 aa17.84■□□□□ 0.45
ABCA2-218ENST00000487109 CNGB1Q14028 1251 aaPredicted RBP17.81■□□□□ 0.44
ABCA2-218ENST00000487109 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.78■□□□□ 0.44
ABCA2-218ENST00000487109 HNRNPUL2Q1KMD3 747 aaKnown RBP17.78■□□□□ 0.44
ABCA2-218ENST00000487109 ITGAEP38570 1179 aa17.7■□□□□ 0.42
ABCA2-218ENST00000487109 PPARGC1BQ86YN6 1023 aaKnown RBP17.7■□□□□ 0.42
ABCA2-218ENST00000487109 ZBTB47Q9UFB7 747 aaPredicted RBP17.56■□□□□ 0.4
ABCA2-218ENST00000487109 TRIM26Q12899 539 aaPredicted RBP17.56■□□□□ 0.4
ABCA2-218ENST00000487109 SLC24A1O60721 1099 aa17.44■□□□□ 0.38
ABCA2-218ENST00000487109 HRCP23327 699 aa17.36■□□□□ 0.37
ABCA2-218ENST00000487109 BCL11AQ9H165 835 aa17.35■□□□□ 0.37
ABCA2-218ENST00000487109 CANXP27824 592 aaKnown RBP17.27■□□□□ 0.35
ABCA2-218ENST00000487109 ABCC9O60706 1549 aa17.25■□□□□ 0.35
ABCA2-218ENST00000487109 CDK11AQ9UQ88 783 aaPredicted RBP17.24■□□□□ 0.35
ABCA2-218ENST00000487109 NEFMP07197 916 aa17.19■□□□□ 0.34
ABCA2-218ENST00000487109 TRIM52Q96A61 297 aa17.18■□□□□ 0.34
ABCA2-218ENST00000487109 DIEXFQ68CQ4 756 aaKnown RBP17.17■□□□□ 0.34
ABCA2-218ENST00000487109 FAM50AQ14320 339 aaKnown RBP17.16■□□□□ 0.34
ABCA2-218ENST00000487109 ANP32BQ92688 251 aaKnown RBP17.16■□□□□ 0.34
ABCA2-218ENST00000487109 BCANQ96GW7 911 aa17.14■□□□□ 0.33
ABCA2-218ENST00000487109 ANP32CO43423 234 aa17.08■□□□□ 0.32
ABCA2-218ENST00000487109 NEUROD1Q13562 356 aa17.07■□□□□ 0.32
ABCA2-218ENST00000487109 ZNF326Q5BKZ1 582 aaKnown RBP17.06■□□□□ 0.32
ABCA2-218ENST00000487109 PABPN1Q86U42 306 aaKnown RBP eCLIP17.06■□□□□ 0.327e-6■□□□□ 8.8
ABCA2-218ENST00000487109 ANP32AP39687 249 aaKnown RBP17.04■□□□□ 0.32
ABCA2-218ENST00000487109 EIF5BO60841 1220 aaKnown RBP17.02■□□□□ 0.31
ABCA2-218ENST00000487109 HSP90AA1P07900 732 aaKnown RBP17.02■□□□□ 0.31
ABCA2-218ENST00000487109 LOC105371045A0A1W2PR82 267 aa17.01■□□□□ 0.31
ABCA2-218ENST00000487109 GLIPR1L2Q4G1C9 344 aa16.97■□□□□ 0.31
ABCA2-218ENST00000487109 NPM2Q86SE8 214 aaKnown RBP16.93■□□□□ 0.3
ABCA2-218ENST00000487109 FBLN2P98095 1184 aa16.92■□□□□ 0.3
ABCA2-218ENST00000487109 CDK11BP21127 795 aaKnown RBP16.9■□□□□ 0.3
ABCA2-218ENST00000487109 UPF2Q9HAU5 1272 aaKnown RBP16.86■□□□□ 0.29
ABCA2-218ENST00000487109 GTF3C3Q9Y5Q9 886 aa16.85■□□□□ 0.29
ABCA2-218ENST00000487109 ESF1Q9H501 851 aaKnown RBP16.77■□□□□ 0.28
ABCA2-218ENST00000487109 CCDC180Q9P1Z9 1646 aa16.77■□□□□ 0.27
ABCA2-218ENST00000487109 NPM1P06748 294 aaKnown RBP eCLIP16.68■□□□□ 0.26
ABCA2-218ENST00000487109 CSRNP3Q8WYN3 585 aa16.66■□□□□ 0.26
ABCA2-218ENST00000487109 STAG3Q9UJ98 1225 aa16.66■□□□□ 0.26
ABCA2-218ENST00000487109 SCRIBQ14160 1630 aa16.66■□□□□ 0.26
ABCA2-218ENST00000487109 ARXQ96QS3 562 aa16.65■□□□□ 0.26
ABCA2-218ENST00000487109 PLPPR3Q6T4P5 718 aa16.63■□□□□ 0.25
ABCA2-218ENST00000487109 ZNF777Q9ULD5 760 aaPredicted RBP16.57■□□□□ 0.24
ABCA2-218ENST00000487109 A0A0G2JS52 829 aa16.55■□□□□ 0.24
ABCA2-218ENST00000487109 SCAF1Q9H7N4 1312 aaKnown RBP16.55■□□□□ 0.24
ABCA2-218ENST00000487109 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.55■□□□□ 0.24
ABCA2-218ENST00000487109 NBR1Q14596 966 aa16.54■□□□□ 0.24
ABCA2-218ENST00000487109 CHGAP10645 457 aaKnown RBP16.54■□□□□ 0.24
ABCA2-218ENST00000487109 P3H3Q8IVL6 736 aa16.53■□□□□ 0.24
ABCA2-218ENST00000487109 RB1CC1Q8TDY2 1594 aa16.51■□□□□ 0.23
ABCA2-218ENST00000487109 ZCCHC6Q5VYS8 1495 aaKnown RBP16.5■□□□□ 0.23
ABCA2-218ENST00000487109 MYH16Q9H6N6 1097 aa16.5■□□□□ 0.23
ABCA2-218ENST00000487109 ACIN1Q9UKV3 1341 aaKnown RBP16.49■□□□□ 0.23
ABCA2-218ENST00000487109 FKBP8Q14318 412 aa16.49■□□□□ 0.23
ABCA2-218ENST00000487109 TNNT2P45379 298 aaPredicted RBP16.48■□□□□ 0.23
ABCA2-218ENST00000487109 ARID3CA6NKF2 412 aa16.48■□□□□ 0.23
ABCA2-218ENST00000487109 TONSLQ96HA7 1378 aa16.47■□□□□ 0.23
ABCA2-218ENST00000487109 NCLP19338 710 aaKnown RBP16.47■□□□□ 0.23
ABCA2-218ENST00000487109 SALL2Q9Y467 1007 aaPredicted RBP16.46■□□□□ 0.23
ABCA2-218ENST00000487109 TULP1O00294 542 aaPredicted RBP16.46■□□□□ 0.23
ABCA2-218ENST00000487109 TRIM44Q96DX7 344 aaPredicted RBP16.45■□□□□ 0.22
ABCA2-218ENST00000487109 ZRSR1Q15695 479 aaKnown RBP16.42■□□□□ 0.22
ABCA2-218ENST00000487109 FAM9BQ8IZU0 186 aa16.41■□□□□ 0.22
ABCA2-218ENST00000487109 CCDC136Q96JN2 1154 aa16.41■□□□□ 0.22
ABCA2-218ENST00000487109 HNRNPUQ00839 825 aaKnown RBP eCLIP16.41■□□□□ 0.22
ABCA2-218ENST00000487109 WDR43Q15061 677 aaKnown RBP eCLIP16.4■□□□□ 0.22
ABCA2-218ENST00000487109 TMC1Q8TDI8 760 aa16.37■□□□□ 0.21
ABCA2-218ENST00000487109 TSPY4P0CV99 314 aa16.36■□□□□ 0.21
ABCA2-218ENST00000487109 TSPY10P0CW01 314 aa16.36■□□□□ 0.21
ABCA2-218ENST00000487109 GOLGA6L22H0YM25 854 aa16.33■□□□□ 0.2
ABCA2-218ENST00000487109 BECN1Q14457 450 aa16.33■□□□□ 0.2
ABCA2-218ENST00000487109 CHMP7Q8WUX9 453 aaPredicted RBP16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms