RNA–Protein interactions for RNA: ENST00000614293.4

ABCA2-223, Transcript of ATP binding cassette subfamily A member 2, humanhuman

TSL 5 BASIC

Gene ABCA2, Length 8,146 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA2-223ENST00000614293 DCAF8L2P0C7V8 631 aa20.71■□□□□ 0.91
ABCA2-223ENST00000614293 FAM9AQ8IZU1 332 aaPredicted RBP19.76■□□□□ 0.75
ABCA2-223ENST00000614293 PELP1Q8IZL8 1130 aaKnown RBP19.71■□□□□ 0.75
ABCA2-223ENST00000614293 MYT1Q01538 1121 aa19.33■□□□□ 0.68
ABCA2-223ENST00000614293 NISCHQ9Y2I1 1504 aa19.29■□□□□ 0.68
ABCA2-223ENST00000614293 APLP2Q06481 763 aa19.24■□□□□ 0.67
ABCA2-223ENST00000614293 SUPT5HO00267 1087 aaKnown RBP18.95■□□□□ 0.62
ABCA2-223ENST00000614293 CCER1Q8TC90 406 aaPredicted RBP18.84■□□□□ 0.61
ABCA2-223ENST00000614293 ERICH6Q7L0X2 663 aa18.74■□□□□ 0.59
ABCA2-223ENST00000614293 EHMT2Q96KQ7 1210 aa18.71■□□□□ 0.59
ABCA2-223ENST00000614293 ATP1B4Q9UN42 357 aaPredicted RBP18.44■□□□□ 0.54
ABCA2-223ENST00000614293 SHROOM4Q9ULL8 1493 aa18.43■□□□□ 0.54
ABCA2-223ENST00000614293 MYT1LQ9UL68 1186 aa18.26■□□□□ 0.51
ABCA2-223ENST00000614293 CENPBP07199 599 aaPredicted RBP18.21■□□□□ 0.51
ABCA2-223ENST00000614293 NEFLP07196 543 aa18.19■□□□□ 0.5
ABCA2-223ENST00000614293 RANGAP1P46060 587 aaPredicted RBP18.12■□□□□ 0.49
ABCA2-223ENST00000614293 DAXXQ9UER7 740 aaPredicted RBP18.11■□□□□ 0.49
ABCA2-223ENST00000614293 TTBK1Q5TCY1 1321 aaPredicted RBP18.1■□□□□ 0.49
ABCA2-223ENST00000614293 ZEB1P37275 1124 aaPredicted RBP18■□□□□ 0.47
ABCA2-223ENST00000614293 YTHDC1Q96MU7 727 aaKnown RBP18■□□□□ 0.47
ABCA2-223ENST00000614293 PCGF6Q9BYE7 350 aa17.91■□□□□ 0.46
ABCA2-223ENST00000614293 UBTFP17480 764 aaKnown RBP17.89■□□□□ 0.45
ABCA2-223ENST00000614293 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.84■□□□□ 0.45
ABCA2-223ENST00000614293 HNRNPUL2Q1KMD3 747 aaKnown RBP17.84■□□□□ 0.45
ABCA2-223ENST00000614293 SLC4A1APQ9BWU0 796 aaKnown RBP17.79■□□□□ 0.44
ABCA2-223ENST00000614293 CHIC1Q5VXU3 224 aa17.74■□□□□ 0.43
ABCA2-223ENST00000614293 TRIM41Q8WV44 630 aa17.74■□□□□ 0.43
ABCA2-223ENST00000614293 POLR3GLQ9BT43 218 aa17.66■□□□□ 0.42
ABCA2-223ENST00000614293 ZNF316A6NFI3 1004 aaPredicted RBP17.53■□□□□ 0.4
ABCA2-223ENST00000614293 ZBTB47Q9UFB7 747 aaPredicted RBP17.5■□□□□ 0.39
ABCA2-223ENST00000614293 CLSPNQ9HAW4 1339 aa17.5■□□□□ 0.39
ABCA2-223ENST00000614293 SLC24A1O60721 1099 aa17.35■□□□□ 0.37
ABCA2-223ENST00000614293 BCANQ96GW7 911 aa17.29■□□□□ 0.36
ABCA2-223ENST00000614293 NEFMP07197 916 aa17.29■□□□□ 0.36
ABCA2-223ENST00000614293 ITGAEP38570 1179 aa17.28■□□□□ 0.36
ABCA2-223ENST00000614293 RTL5Q5HYW3 569 aaPredicted RBP17.24■□□□□ 0.35
ABCA2-223ENST00000614293 CNGB1Q14028 1251 aaPredicted RBP17.2■□□□□ 0.34
ABCA2-223ENST00000614293 ESF1Q9H501 851 aaKnown RBP17.14■□□□□ 0.33
ABCA2-223ENST00000614293 TRIM26Q12899 539 aaPredicted RBP17.03■□□□□ 0.32
ABCA2-223ENST00000614293 CANXP27824 592 aaKnown RBP17.02■□□□□ 0.32
ABCA2-223ENST00000614293 HRCP23327 699 aa17■□□□□ 0.31
ABCA2-223ENST00000614293 TRIM52Q96A61 297 aa16.99■□□□□ 0.31
ABCA2-223ENST00000614293 FAM50AQ14320 339 aaKnown RBP16.93■□□□□ 0.3
ABCA2-223ENST00000614293 PPARGC1BQ86YN6 1023 aaKnown RBP16.9■□□□□ 0.3
ABCA2-223ENST00000614293 CDK11BP21127 795 aaKnown RBP16.9■□□□□ 0.3
ABCA2-223ENST00000614293 FBLN2P98095 1184 aa16.9■□□□□ 0.3
ABCA2-223ENST00000614293 CDK11AQ9UQ88 783 aaPredicted RBP16.9■□□□□ 0.3
ABCA2-223ENST00000614293 STAG3Q9UJ98 1225 aa16.86■□□□□ 0.29
ABCA2-223ENST00000614293 BCL11AQ9H165 835 aa16.85■□□□□ 0.29
ABCA2-223ENST00000614293 GLIPR1L2Q4G1C9 344 aa16.83■□□□□ 0.29
ABCA2-223ENST00000614293 ANP32BQ92688 251 aaKnown RBP16.82■□□□□ 0.28
ABCA2-223ENST00000614293 ZNF326Q5BKZ1 582 aaKnown RBP16.76■□□□□ 0.27
ABCA2-223ENST00000614293 NPM1P06748 294 aaKnown RBP eCLIP16.75■□□□□ 0.27
ABCA2-223ENST00000614293 NPM2Q86SE8 214 aaKnown RBP16.74■□□□□ 0.27
ABCA2-223ENST00000614293 PLPPR3Q6T4P5 718 aa16.69■□□□□ 0.26
ABCA2-223ENST00000614293 HSP90AA1P07900 732 aaKnown RBP16.68■□□□□ 0.26
ABCA2-223ENST00000614293 ANP32CO43423 234 aa16.68■□□□□ 0.26
ABCA2-223ENST00000614293 SCAF1Q9H7N4 1312 aaKnown RBP16.66■□□□□ 0.26
ABCA2-223ENST00000614293 A0A0G2JS52 829 aa16.62■□□□□ 0.25
ABCA2-223ENST00000614293 NEUROD1Q13562 356 aa16.62■□□□□ 0.25
ABCA2-223ENST00000614293 UPF2Q9HAU5 1272 aaKnown RBP16.59■□□□□ 0.25
ABCA2-223ENST00000614293 EIF5BO60841 1220 aaKnown RBP16.51■□□□□ 0.23
ABCA2-223ENST00000614293 CHGAP10645 457 aaKnown RBP16.51■□□□□ 0.23
ABCA2-223ENST00000614293 DIEXFQ68CQ4 756 aaKnown RBP16.5■□□□□ 0.23
ABCA2-223ENST00000614293 ANP32AP39687 249 aaKnown RBP16.49■□□□□ 0.23
ABCA2-223ENST00000614293 HAP1P54257 671 aaPredicted RBP16.46■□□□□ 0.22
ABCA2-223ENST00000614293 CCDC180Q9P1Z9 1646 aa16.45■□□□□ 0.22
ABCA2-223ENST00000614293 ZNF777Q9ULD5 760 aaPredicted RBP16.43■□□□□ 0.22
ABCA2-223ENST00000614293 C14orf37Q86TY3 774 aa16.41■□□□□ 0.22
ABCA2-223ENST00000614293 MYH16Q9H6N6 1097 aa16.4■□□□□ 0.22
ABCA2-223ENST00000614293 ABCC9O60706 1549 aa16.39■□□□□ 0.21
ABCA2-223ENST00000614293 GTF3C3Q9Y5Q9 886 aa16.37■□□□□ 0.21
ABCA2-223ENST00000614293 NPHP1O15259 732 aa16.35■□□□□ 0.21
ABCA2-223ENST00000614293 PABPN1Q86U42 306 aaKnown RBP eCLIP16.34■□□□□ 0.217e-6■□□□□ 8.8
ABCA2-223ENST00000614293 LOC105371045A0A1W2PR82 267 aa16.33■□□□□ 0.2
ABCA2-223ENST00000614293 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.32■□□□□ 0.2
ABCA2-223ENST00000614293 ZBTB7CA1YPR0 619 aa16.27■□□□□ 0.19
ABCA2-223ENST00000614293 ZRSR1Q15695 479 aaKnown RBP16.25■□□□□ 0.19
ABCA2-223ENST00000614293 PPP1R15AO75807 674 aaPredicted RBP16.25■□□□□ 0.19
ABCA2-223ENST00000614293 ARID3CA6NKF2 412 aa16.24■□□□□ 0.19
ABCA2-223ENST00000614293 ACIN1Q9UKV3 1341 aaKnown RBP16.22■□□□□ 0.19
ABCA2-223ENST00000614293 TULP1O00294 542 aaPredicted RBP16.22■□□□□ 0.19
ABCA2-223ENST00000614293 NCLP19338 710 aaKnown RBP16.21■□□□□ 0.19
ABCA2-223ENST00000614293 WDR43Q15061 677 aaKnown RBP eCLIP16.21■□□□□ 0.19
ABCA2-223ENST00000614293 ARXQ96QS3 562 aa16.2■□□□□ 0.18
ABCA2-223ENST00000614293 ARID4BQ4LE39 1312 aaPredicted RBP16.18■□□□□ 0.18
ABCA2-223ENST00000614293 DCAF1Q9Y4B6 1507 aa16.17■□□□□ 0.18
ABCA2-223ENST00000614293 P3H3Q8IVL6 736 aa16.13■□□□□ 0.17
ABCA2-223ENST00000614293 CASC1Q6TDU7 716 aa16.13■□□□□ 0.17
ABCA2-223ENST00000614293 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.12■□□□□ 0.171e-6■□□□□ 9.5
ABCA2-223ENST00000614293 TONSLQ96HA7 1378 aa16.12■□□□□ 0.17
ABCA2-223ENST00000614293 GOLGA2Q08379 1002 aa16.12■□□□□ 0.17
ABCA2-223ENST00000614293 EIF4G2P78344 907 aaKnown RBP eCLIP16.11■□□□□ 0.17
ABCA2-223ENST00000614293 PLEKHG5O94827 1062 aa16.1■□□□□ 0.17
ABCA2-223ENST00000614293 TSPY4P0CV99 314 aa16.07■□□□□ 0.16
ABCA2-223ENST00000614293 TSPY10P0CW01 314 aa16.07■□□□□ 0.16
ABCA2-223ENST00000614293 TRIM44Q96DX7 344 aaPredicted RBP16.06■□□□□ 0.16
ABCA2-223ENST00000614293 ZCCHC6Q5VYS8 1495 aaKnown RBP16.06■□□□□ 0.16
ABCA2-223ENST00000614293 TMC1Q8TDI8 760 aa16.05■□□□□ 0.16
ABCA2-223ENST00000614293 NCBP3Q53F19 620 aaKnown RBP16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms