RNA–Protein interactions for RNA: ENST00000471063.2

ATP13A1-206, Transcript of ATPase 13A1, humanhuman

TSL 2

Gene ATP13A1, Length 373 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A1-206ENST00000471063 NISCHQ9Y2I1 1504 aa28.79■■■□□ 2.2
ATP13A1-206ENST00000471063 ABCC9O60706 1549 aa26.85■■□□□ 1.89
ATP13A1-206ENST00000471063 CCDC180Q9P1Z9 1646 aa26.13■■□□□ 1.77
ATP13A1-206ENST00000471063 DNAJC5BQ9UF47 199 aa25.81■■□□□ 1.72
ATP13A1-206ENST00000471063 RB1CC1Q8TDY2 1594 aa25.24■■□□□ 1.63
ATP13A1-206ENST00000471063 PABPN1Q86U42 306 aaKnown RBP eCLIP24.89■■□□□ 1.581e-7■□□□□ 8.7
ATP13A1-206ENST00000471063 NACADO15069 1562 aa24.88■■□□□ 1.57
ATP13A1-206ENST00000471063 DCAF8L2P0C7V8 631 aa24.67■■□□□ 1.54
ATP13A1-206ENST00000471063 UNC13AQ9UPW8 1703 aa24.61■■□□□ 1.53
ATP13A1-206ENST00000471063 BICRAQ9NZM4 1560 aa24.5■■□□□ 1.51
ATP13A1-206ENST00000471063 MYO15BQ96JP2 1530 aa24.3■■□□□ 1.48
ATP13A1-206ENST00000471063 CECR2Q9BXF3 1484 aa24.26■■□□□ 1.47
ATP13A1-206ENST00000471063 DNAJC5Q9H3Z4 198 aa24.23■■□□□ 1.47
ATP13A1-206ENST00000471063 CC2D2AQ9P2K1 1620 aa24.2■■□□□ 1.46
ATP13A1-206ENST00000471063 SHROOM4Q9ULL8 1493 aa24.13■■□□□ 1.45
ATP13A1-206ENST00000471063 EIF4G1Q04637 1599 aaKnown RBP23.97■■□□□ 1.43
ATP13A1-206ENST00000471063 SCRIBQ14160 1630 aa23.78■■□□□ 1.4
ATP13A1-206ENST00000471063 DCAF1Q9Y4B6 1507 aa23.73■■□□□ 1.39
ATP13A1-206ENST00000471063 ZCCHC6Q5VYS8 1495 aaKnown RBP23.7■■□□□ 1.38
ATP13A1-206ENST00000471063 CUX2O14529 1486 aa23.43■■□□□ 1.34
ATP13A1-206ENST00000471063 ERCC6Q03468 1493 aa23.24■■□□□ 1.31
ATP13A1-206ENST00000471063 NCAPD3P42695 1498 aa22.99■■□□□ 1.27
ATP13A1-206ENST00000471063 TRIM41Q8WV44 630 aa22.89■■□□□ 1.25
ATP13A1-206ENST00000471063 NESP48681 1621 aa22.85■■□□□ 1.25
ATP13A1-206ENST00000471063 ATAD2BQ9ULI0 1458 aa22.81■■□□□ 1.24
ATP13A1-206ENST00000471063 THOC2Q8NI27 1593 aaKnown RBP22.75■■□□□ 1.23
ATP13A1-206ENST00000471063 HMGXB3Q12766 1538 aa22.74■■□□□ 1.23
ATP13A1-206ENST00000471063 SMARCA2P51531 1590 aa22.72■■□□□ 1.23
ATP13A1-206ENST00000471063 SMARCA4P51532 1647 aa22.6■■□□□ 1.21
ATP13A1-206ENST00000471063 LAMC3Q9Y6N6 1575 aa22.58■■□□□ 1.2
ATP13A1-206ENST00000471063 BAZ1BQ9UIG0 1483 aaKnown RBP22.57■■□□□ 1.2
ATP13A1-206ENST00000471063 KIF21AQ7Z4S6 1674 aa22.51■■□□□ 1.19
ATP13A1-206ENST00000471063 PDS5BQ9NTI5 1447 aa22.5■■□□□ 1.19
ATP13A1-206ENST00000471063 BAZ1AQ9NRL2 1556 aaPredicted RBP22.4■■□□□ 1.18
ATP13A1-206ENST00000471063 PEG3Q9GZU2 1588 aa22.38■■□□□ 1.17
ATP13A1-206ENST00000471063 MRC2Q9UBG0 1479 aa22.33■■□□□ 1.16
ATP13A1-206ENST00000471063 WDR62O43379 1518 aa22.28■■□□□ 1.16
ATP13A1-206ENST00000471063 OSCARQ8IYS5 282 aa22.27■■□□□ 1.16
ATP13A1-206ENST00000471063 CADPSQ9ULU8 1353 aa22.26■■□□□ 1.15
ATP13A1-206ENST00000471063 MROH2BQ7Z745 1585 aa22.17■■□□□ 1.14
ATP13A1-206ENST00000471063 CEP164Q9UPV0 1460 aa22.1■■□□□ 1.13
ATP13A1-206ENST00000471063 RIMBP3CA6NJZ7 1639 aa22.02■■□□□ 1.12
ATP13A1-206ENST00000471063 RIMBP3BA6NNM3 1639 aa22.02■■□□□ 1.12
ATP13A1-206ENST00000471063 RIMBP3Q9UFD9 1639 aa22.02■■□□□ 1.12
ATP13A1-206ENST00000471063 FANCD2Q9BXW9 1451 aa22.01■■□□□ 1.11
ATP13A1-206ENST00000471063 ARHGEF11O15085 1522 aa21.88■■□□□ 1.09
ATP13A1-206ENST00000471063 WIZO95785 1651 aa21.87■■□□□ 1.09
ATP13A1-206ENST00000471063 URB2Q14146 1524 aaKnown RBP21.86■■□□□ 1.09
ATP13A1-206ENST00000471063 CFTRP13569 1480 aa21.85■■□□□ 1.09
ATP13A1-206ENST00000471063 TRHP20396 242 aaPredicted RBP21.8■■□□□ 1.08
ATP13A1-206ENST00000471063 CYB5RLQ6IPT4 315 aa21.79■■□□□ 1.08
ATP13A1-206ENST00000471063 ZNF608Q9ULD9 1512 aaPredicted RBP21.71■■□□□ 1.07
ATP13A1-206ENST00000471063 AEBP2Q6ZN18 517 aaPredicted RBP21.7■■□□□ 1.06
ATP13A1-206ENST00000471063 IFT140Q96RY7 1462 aa21.69■■□□□ 1.06
ATP13A1-206ENST00000471063 ARAP1Q96P48 1450 aa21.62■■□□□ 1.05
ATP13A1-206ENST00000471063 TOP2AP11388 1531 aaKnown RBP21.55■■□□□ 1.04
ATP13A1-206ENST00000471063 EIF4G3O43432 1585 aaKnown RBP21.55■■□□□ 1.04
ATP13A1-206ENST00000471063 PRDM2Q13029 1718 aa21.54■■□□□ 1.04
ATP13A1-206ENST00000471063 RSF1Q96T23 1441 aaPredicted RBP21.52■■□□□ 1.04
ATP13A1-206ENST00000471063 CHD1O14646 1710 aa21.52■■□□□ 1.03
ATP13A1-206ENST00000471063 TOPBP1Q92547 1522 aa21.5■■□□□ 1.03
ATP13A1-206ENST00000471063 FBLN2P98095 1184 aa21.48■■□□□ 1.03
ATP13A1-206ENST00000471063 AQRO60306 1485 aaKnown RBP eCLIP21.45■■□□□ 1.022e-6■■□□□ 13.1
ATP13A1-206ENST00000471063 ABCC8Q09428 1581 aa21.43■■□□□ 1.02
ATP13A1-206ENST00000471063 DNMBPQ6XZF7 1577 aa21.36■■□□□ 1.01
ATP13A1-206ENST00000471063 TARBP1Q13395 1621 aaKnown RBP21.36■■□□□ 1.01
ATP13A1-206ENST00000471063 CCDC88BA6NC98 1476 aa21.32■■□□□ 1
ATP13A1-206ENST00000471063 CLASP1Q7Z460 1538 aa21.26■□□□□ 0.99
ATP13A1-206ENST00000471063 POLA1P09884 1462 aaPredicted RBP21.24■□□□□ 0.99
ATP13A1-206ENST00000471063 SYNJ1O43426 1573 aa21.2■□□□□ 0.98
ATP13A1-206ENST00000471063 TDRD9Q8NDG6 1382 aaKnown RBP21.2■□□□□ 0.98
ATP13A1-206ENST00000471063 SNAPC4Q5SXM2 1469 aa21.2■□□□□ 0.98
ATP13A1-206ENST00000471063 CHMP7Q8WUX9 453 aaPredicted RBP21.19■□□□□ 0.98
ATP13A1-206ENST00000471063 RAD54L2Q9Y4B4 1467 aa21.19■□□□□ 0.98
ATP13A1-206ENST00000471063 SOGA1O94964 1423 aa21.15■□□□□ 0.98
ATP13A1-206ENST00000471063 GAPVD1Q14C86 1478 aa21.11■□□□□ 0.97
ATP13A1-206ENST00000471063 MAGI1Q96QZ7 1491 aaPredicted RBP21.11■□□□□ 0.97
ATP13A1-206ENST00000471063 WDR97A6NE52 1622 aa21.1■□□□□ 0.97
ATP13A1-206ENST00000471063 SYNJ2O15056 1496 aa21.06■□□□□ 0.96
ATP13A1-206ENST00000471063 GRIN2BQ13224 1484 aa21.05■□□□□ 0.96
ATP13A1-206ENST00000471063 FGD5Q6ZNL6 1462 aa21.01■□□□□ 0.95
ATP13A1-206ENST00000471063 PBRM1Q86U86 1689 aa20.89■□□□□ 0.93
ATP13A1-206ENST00000471063 ERCC6L2Q5T890 1561 aa20.88■□□□□ 0.93
ATP13A1-206ENST00000471063 CUX1P39880 1505 aa20.88■□□□□ 0.93
ATP13A1-206ENST00000471063 ILDR1Q86SU0 546 aaPredicted RBP20.81■□□□□ 0.92
ATP13A1-206ENST00000471063 KIF13AQ9H1H9 1805 aa20.79■□□□□ 0.92
ATP13A1-206ENST00000471063 CEP170Q5SW79 1584 aa20.79■□□□□ 0.92
ATP13A1-206ENST00000471063 GRIN2AQ12879 1464 aa20.76■□□□□ 0.91
ATP13A1-206ENST00000471063 ABCA5Q8WWZ7 1642 aa20.75■□□□□ 0.91
ATP13A1-206ENST00000471063 ABCA10Q8WWZ4 1543 aa20.73■□□□□ 0.91
ATP13A1-206ENST00000471063 NUP160Q12769 1436 aa20.71■□□□□ 0.91
ATP13A1-206ENST00000471063 KDM4FA0A1W2PPD8 638 aa20.7■□□□□ 0.9
ATP13A1-206ENST00000471063 SHROOM2Q13796 1616 aa20.7■□□□□ 0.9
ATP13A1-206ENST00000471063 FAM69CQ0P6D2 419 aa20.68■□□□□ 0.9
ATP13A1-206ENST00000471063 ADAMTS12P58397 1594 aa20.65■□□□□ 0.9
ATP13A1-206ENST00000471063 ABCC10Q5T3U5 1492 aa20.63■□□□□ 0.89
ATP13A1-206ENST00000471063 NPM1P06748 294 aaKnown RBP eCLIP20.6■□□□□ 0.89
ATP13A1-206ENST00000471063 PRG4Q92954 1404 aaPredicted RBP20.6■□□□□ 0.89
ATP13A1-206ENST00000471063 KDM6BO15054 1643 aa20.58■□□□□ 0.89
ATP13A1-206ENST00000471063 FHAD1B1AJZ9 1412 aa20.58■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms