RNA–Protein interactions for RNA: ENST00000341511.10

ABCA2-202, Transcript of ATP binding cassette subfamily A member 2, humanhuman

APPRIS P2 TSL 5 BASIC

Gene ABCA2, Length 8,063 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA2-202ENST00000341511 DCAF8L2P0C7V8 631 aa21.19■□□□□ 0.98
ABCA2-202ENST00000341511 PELP1Q8IZL8 1130 aaKnown RBP20.76■□□□□ 0.91
ABCA2-202ENST00000341511 MYT1Q01538 1121 aa20.34■□□□□ 0.85
ABCA2-202ENST00000341511 SUPT5HO00267 1087 aaKnown RBP19.93■□□□□ 0.78
ABCA2-202ENST00000341511 CCER1Q8TC90 406 aaPredicted RBP19.77■□□□□ 0.75
ABCA2-202ENST00000341511 APLP2Q06481 763 aa19.72■□□□□ 0.75
ABCA2-202ENST00000341511 ERICH6Q7L0X2 663 aa19.71■□□□□ 0.75
ABCA2-202ENST00000341511 EHMT2Q96KQ7 1210 aa19.67■□□□□ 0.74
ABCA2-202ENST00000341511 FAM9AQ8IZU1 332 aaPredicted RBP19.65■□□□□ 0.74
ABCA2-202ENST00000341511 CENPBP07199 599 aaPredicted RBP19.56■□□□□ 0.72
ABCA2-202ENST00000341511 ZEB1P37275 1124 aaPredicted RBP19.34■□□□□ 0.69
ABCA2-202ENST00000341511 NISCHQ9Y2I1 1504 aa19.34■□□□□ 0.69
ABCA2-202ENST00000341511 SHROOM4Q9ULL8 1493 aa19.32■□□□□ 0.68
ABCA2-202ENST00000341511 NEFLP07196 543 aa19.14■□□□□ 0.65
ABCA2-202ENST00000341511 PCGF6Q9BYE7 350 aa19.11■□□□□ 0.65
ABCA2-202ENST00000341511 TTBK1Q5TCY1 1321 aaPredicted RBP19.07■□□□□ 0.64
ABCA2-202ENST00000341511 YTHDC1Q96MU7 727 aaKnown RBP19■□□□□ 0.63
ABCA2-202ENST00000341511 ATP1B4Q9UN42 357 aaPredicted RBP18.9■□□□□ 0.62
ABCA2-202ENST00000341511 RANGAP1P46060 587 aaPredicted RBP18.82■□□□□ 0.6
ABCA2-202ENST00000341511 DAXXQ9UER7 740 aaPredicted RBP18.8■□□□□ 0.6
ABCA2-202ENST00000341511 UBTFP17480 764 aaKnown RBP18.52■□□□□ 0.56
ABCA2-202ENST00000341511 TRIM41Q8WV44 630 aa18.49■□□□□ 0.55
ABCA2-202ENST00000341511 MYT1LQ9UL68 1186 aa18.4■□□□□ 0.54
ABCA2-202ENST00000341511 RTL5Q5HYW3 569 aaPredicted RBP18.38■□□□□ 0.53
ABCA2-202ENST00000341511 TRIM26Q12899 539 aaPredicted RBP18.33■□□□□ 0.52
ABCA2-202ENST00000341511 POLR3GLQ9BT43 218 aa18.31■□□□□ 0.52
ABCA2-202ENST00000341511 ZNF316A6NFI3 1004 aaPredicted RBP18.27■□□□□ 0.52
ABCA2-202ENST00000341511 HRCP23327 699 aa18.18■□□□□ 0.5
ABCA2-202ENST00000341511 CLSPNQ9HAW4 1339 aa18.17■□□□□ 0.5
ABCA2-202ENST00000341511 SLC4A1APQ9BWU0 796 aaKnown RBP18.16■□□□□ 0.5
ABCA2-202ENST00000341511 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.14■□□□□ 0.49
ABCA2-202ENST00000341511 HNRNPUL2Q1KMD3 747 aaKnown RBP18.14■□□□□ 0.49
ABCA2-202ENST00000341511 CHIC1Q5VXU3 224 aa18.06■□□□□ 0.48
ABCA2-202ENST00000341511 CNGB1Q14028 1251 aaPredicted RBP18.04■□□□□ 0.48
ABCA2-202ENST00000341511 ITGAEP38570 1179 aa18.04■□□□□ 0.48
ABCA2-202ENST00000341511 PPARGC1BQ86YN6 1023 aaKnown RBP18.01■□□□□ 0.47
ABCA2-202ENST00000341511 DIEXFQ68CQ4 756 aaKnown RBP17.91■□□□□ 0.46
ABCA2-202ENST00000341511 ZBTB47Q9UFB7 747 aaPredicted RBP17.89■□□□□ 0.45
ABCA2-202ENST00000341511 CDK11AQ9UQ88 783 aaPredicted RBP17.83■□□□□ 0.44
ABCA2-202ENST00000341511 GLIPR1L2Q4G1C9 344 aa17.71■□□□□ 0.43
ABCA2-202ENST00000341511 SLC24A1O60721 1099 aa17.67■□□□□ 0.42
ABCA2-202ENST00000341511 ANP32AP39687 249 aaKnown RBP17.62■□□□□ 0.41
ABCA2-202ENST00000341511 GTF3C3Q9Y5Q9 886 aa17.61■□□□□ 0.41
ABCA2-202ENST00000341511 ANP32BQ92688 251 aaKnown RBP17.61■□□□□ 0.41
ABCA2-202ENST00000341511 ANP32CO43423 234 aa17.59■□□□□ 0.41
ABCA2-202ENST00000341511 CANXP27824 592 aaKnown RBP17.58■□□□□ 0.4
ABCA2-202ENST00000341511 NEFMP07197 916 aa17.56■□□□□ 0.4
ABCA2-202ENST00000341511 TRIM52Q96A61 297 aa17.55■□□□□ 0.4
ABCA2-202ENST00000341511 BCL11AQ9H165 835 aa17.54■□□□□ 0.4
ABCA2-202ENST00000341511 FAM50AQ14320 339 aaKnown RBP17.53■□□□□ 0.4
ABCA2-202ENST00000341511 EIF5BO60841 1220 aaKnown RBP17.48■□□□□ 0.39
ABCA2-202ENST00000341511 LOC105371045A0A1W2PR82 267 aa17.46■□□□□ 0.39
ABCA2-202ENST00000341511 BCANQ96GW7 911 aa17.44■□□□□ 0.38
ABCA2-202ENST00000341511 NEUROD1Q13562 356 aa17.42■□□□□ 0.38
ABCA2-202ENST00000341511 ZNF326Q5BKZ1 582 aaKnown RBP17.39■□□□□ 0.37
ABCA2-202ENST00000341511 HSP90AA1P07900 732 aaKnown RBP17.32■□□□□ 0.36
ABCA2-202ENST00000341511 UPF2Q9HAU5 1272 aaKnown RBP17.32■□□□□ 0.36
ABCA2-202ENST00000341511 ACIN1Q9UKV3 1341 aaKnown RBP17.3■□□□□ 0.36
ABCA2-202ENST00000341511 NPM2Q86SE8 214 aaKnown RBP17.19■□□□□ 0.34
ABCA2-202ENST00000341511 FBLN2P98095 1184 aa17.16■□□□□ 0.34
ABCA2-202ENST00000341511 CDK11BP21127 795 aaKnown RBP17.16■□□□□ 0.34
ABCA2-202ENST00000341511 ESF1Q9H501 851 aaKnown RBP17.1■□□□□ 0.33
ABCA2-202ENST00000341511 TNNT2P45379 298 aaPredicted RBP17.08■□□□□ 0.32
ABCA2-202ENST00000341511 PABPN1Q86U42 306 aaKnown RBP eCLIP17.06■□□□□ 0.327e-6■□□□□ 8.8
ABCA2-202ENST00000341511 FKBP8Q14318 412 aa17.04■□□□□ 0.32
ABCA2-202ENST00000341511 ANP32EQ9BTT0 268 aa17.03■□□□□ 0.32
ABCA2-202ENST00000341511 STAG3Q9UJ98 1225 aa17■□□□□ 0.31
ABCA2-202ENST00000341511 ABCC9O60706 1549 aa17■□□□□ 0.31
ABCA2-202ENST00000341511 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.99■□□□□ 0.31
ABCA2-202ENST00000341511 NBR1Q14596 966 aa16.99■□□□□ 0.31
ABCA2-202ENST00000341511 TRIM44Q96DX7 344 aaPredicted RBP16.95■□□□□ 0.3
ABCA2-202ENST00000341511 CCDC136Q96JN2 1154 aa16.94■□□□□ 0.3
ABCA2-202ENST00000341511 HNRNPUQ00839 825 aaKnown RBP eCLIP16.91■□□□□ 0.3
ABCA2-202ENST00000341511 DDRGK1Q96HY6 314 aa16.89■□□□□ 0.29
ABCA2-202ENST00000341511 BECN1Q14457 450 aa16.88■□□□□ 0.29
ABCA2-202ENST00000341511 ZNF777Q9ULD5 760 aaPredicted RBP16.88■□□□□ 0.29
ABCA2-202ENST00000341511 TONSLQ96HA7 1378 aa16.87■□□□□ 0.29
ABCA2-202ENST00000341511 CHGAP10645 457 aaKnown RBP16.86■□□□□ 0.29
ABCA2-202ENST00000341511 ARXQ96QS3 562 aa16.86■□□□□ 0.29
ABCA2-202ENST00000341511 MYH16Q9H6N6 1097 aa16.84■□□□□ 0.29
ABCA2-202ENST00000341511 PLPPR3Q6T4P5 718 aa16.83■□□□□ 0.29
ABCA2-202ENST00000341511 GOLGA6L22H0YM25 854 aa16.82■□□□□ 0.28
ABCA2-202ENST00000341511 TMC1Q8TDI8 760 aa16.81■□□□□ 0.28
ABCA2-202ENST00000341511 NCLP19338 710 aaKnown RBP16.8■□□□□ 0.28
ABCA2-202ENST00000341511 ARID3CA6NKF2 412 aa16.8■□□□□ 0.28
ABCA2-202ENST00000341511 ERICH6BQ5W0A0 696 aa16.79■□□□□ 0.28
ABCA2-202ENST00000341511 SCAF1Q9H7N4 1312 aaKnown RBP16.78■□□□□ 0.28
ABCA2-202ENST00000341511 A0A0G2JS52 829 aa16.77■□□□□ 0.27
ABCA2-202ENST00000341511 WDR43Q15061 677 aaKnown RBP eCLIP16.76■□□□□ 0.27
ABCA2-202ENST00000341511 FAM9BQ8IZU0 186 aa16.76■□□□□ 0.27
ABCA2-202ENST00000341511 DCAF1Q9Y4B6 1507 aa16.75■□□□□ 0.27
ABCA2-202ENST00000341511 SALL2Q9Y467 1007 aaPredicted RBP16.74■□□□□ 0.27
ABCA2-202ENST00000341511 P3H3Q8IVL6 736 aa16.74■□□□□ 0.27
ABCA2-202ENST00000341511 ZRSR1Q15695 479 aaKnown RBP16.72■□□□□ 0.27
ABCA2-202ENST00000341511 NPM1P06748 294 aaKnown RBP eCLIP16.69■□□□□ 0.26
ABCA2-202ENST00000341511 DNTTIP2Q5QJE6 756 aaKnown RBP16.68■□□□□ 0.26
ABCA2-202ENST00000341511 DDX10Q13206 875 aaKnown RBP16.68■□□□□ 0.26
ABCA2-202ENST00000341511 PTMAP06454 111 aaKnown RBP16.65■□□□□ 0.26
ABCA2-202ENST00000341511 PPM1GO15355 546 aaPredicted RBP16.62■□□□□ 0.25
ABCA2-202ENST00000341511 TULP1O00294 542 aaPredicted RBP16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms