RNA–Protein interactions for RNA: ENST00000479446.5

ABCA2-217, Transcript of ATP binding cassette subfamily A member 2, humanhuman

TSL 1 (best)

Gene ABCA2, Length 6,295 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA2-217ENST00000479446 DCAF8L2P0C7V8 631 aa33.59■■■□□ 2.97
ABCA2-217ENST00000479446 SUPT5HO00267 1087 aaKnown RBP32.28■■■□□ 2.76
ABCA2-217ENST00000479446 NISCHQ9Y2I1 1504 aa32.24■■■□□ 2.75
ABCA2-217ENST00000479446 SHROOM4Q9ULL8 1493 aa31.57■■■□□ 2.65
ABCA2-217ENST00000479446 EHMT2Q96KQ7 1210 aa31.08■■■□□ 2.57
ABCA2-217ENST00000479446 PELP1Q8IZL8 1130 aaKnown RBP30.95■■■□□ 2.54
ABCA2-217ENST00000479446 APLP2Q06481 763 aa30.68■■■□□ 2.5
ABCA2-217ENST00000479446 PCGF6Q9BYE7 350 aa30.44■■■□□ 2.46
ABCA2-217ENST00000479446 FAM9AQ8IZU1 332 aaPredicted RBP30.41■■■□□ 2.46
ABCA2-217ENST00000479446 TTBK1Q5TCY1 1321 aaPredicted RBP30.12■■■□□ 2.41
ABCA2-217ENST00000479446 ZEB1P37275 1124 aaPredicted RBP30.08■■■□□ 2.41
ABCA2-217ENST00000479446 CENPBP07199 599 aaPredicted RBP29.99■■■□□ 2.39
ABCA2-217ENST00000479446 TRIM41Q8WV44 630 aa29.92■■■□□ 2.38
ABCA2-217ENST00000479446 CCER1Q8TC90 406 aaPredicted RBP29.84■■■□□ 2.37
ABCA2-217ENST00000479446 RANGAP1P46060 587 aaPredicted RBP29.68■■■□□ 2.34
ABCA2-217ENST00000479446 ERICH6Q7L0X2 663 aa29.58■■■□□ 2.33
ABCA2-217ENST00000479446 UBTFP17480 764 aaKnown RBP29.52■■■□□ 2.32
ABCA2-217ENST00000479446 ATP1B4Q9UN42 357 aaPredicted RBP29.41■■■□□ 2.3
ABCA2-217ENST00000479446 NEFLP07196 543 aa29.25■■■□□ 2.27
ABCA2-217ENST00000479446 YTHDC1Q96MU7 727 aaKnown RBP29.2■■■□□ 2.26
ABCA2-217ENST00000479446 TRIM26Q12899 539 aaPredicted RBP29.19■■■□□ 2.26
ABCA2-217ENST00000479446 MYT1Q01538 1121 aa29.09■■■□□ 2.25
ABCA2-217ENST00000479446 PPARGC1BQ86YN6 1023 aaKnown RBP29.07■■■□□ 2.24
ABCA2-217ENST00000479446 HRCP23327 699 aa29.03■■■□□ 2.24
ABCA2-217ENST00000479446 CHIC1Q5VXU3 224 aa28.78■■■□□ 2.2
ABCA2-217ENST00000479446 LOC105371045A0A1W2PR82 267 aa28.73■■■□□ 2.19
ABCA2-217ENST00000479446 ITGAEP38570 1179 aa28.57■■■□□ 2.16
ABCA2-217ENST00000479446 HNRNPUL2Q1KMD3 747 aaKnown RBP28.5■■■□□ 2.15
ABCA2-217ENST00000479446 POLR3GLQ9BT43 218 aa28.33■■■□□ 2.13
ABCA2-217ENST00000479446 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.32■■■□□ 2.12
ABCA2-217ENST00000479446 DAXXQ9UER7 740 aaPredicted RBP28.31■■■□□ 2.12
ABCA2-217ENST00000479446 DIEXFQ68CQ4 756 aaKnown RBP28.21■■■□□ 2.11
ABCA2-217ENST00000479446 MYT1LQ9UL68 1186 aa28.13■■■□□ 2.09
ABCA2-217ENST00000479446 CNGB1Q14028 1251 aaPredicted RBP28.03■■■□□ 2.08
ABCA2-217ENST00000479446 FAM50AQ14320 339 aaKnown RBP27.86■■■□□ 2.05
ABCA2-217ENST00000479446 RTL5Q5HYW3 569 aaPredicted RBP27.78■■■□□ 2.04
ABCA2-217ENST00000479446 TRIM52Q96A61 297 aa27.69■■■□□ 2.02
ABCA2-217ENST00000479446 GTF3C3Q9Y5Q9 886 aa27.68■■■□□ 2.02
ABCA2-217ENST00000479446 NEUROD1Q13562 356 aa27.68■■■□□ 2.02
ABCA2-217ENST00000479446 CLSPNQ9HAW4 1339 aa27.68■■■□□ 2.02
ABCA2-217ENST00000479446 SLC4A1APQ9BWU0 796 aaKnown RBP27.67■■■□□ 2.02
ABCA2-217ENST00000479446 ZNF316A6NFI3 1004 aaPredicted RBP27.67■■■□□ 2.02
ABCA2-217ENST00000479446 ANP32CO43423 234 aa27.57■■■□□ 2
ABCA2-217ENST00000479446 BCANQ96GW7 911 aa27.53■■■□□ 2
ABCA2-217ENST00000479446 PABPN1Q86U42 306 aaKnown RBP eCLIP27.53■■■□□ 27e-6■□□□□ 8.8
ABCA2-217ENST00000479446 ABCC9O60706 1549 aa27.48■■□□□ 1.99
ABCA2-217ENST00000479446 CDK11AQ9UQ88 783 aaPredicted RBP27.41■■□□□ 1.98
ABCA2-217ENST00000479446 ZNF326Q5BKZ1 582 aaKnown RBP27.36■■□□□ 1.97
ABCA2-217ENST00000479446 ACIN1Q9UKV3 1341 aaKnown RBP27.34■■□□□ 1.97
ABCA2-217ENST00000479446 CSRNP3Q8WYN3 585 aa27.31■■□□□ 1.96
ABCA2-217ENST00000479446 ZBTB47Q9UFB7 747 aaPredicted RBP27.08■■□□□ 1.93
ABCA2-217ENST00000479446 P3H3Q8IVL6 736 aa27.07■■□□□ 1.92
ABCA2-217ENST00000479446 FBLN2P98095 1184 aa27.03■■□□□ 1.92
ABCA2-217ENST00000479446 CANXP27824 592 aaKnown RBP27.01■■□□□ 1.91
ABCA2-217ENST00000479446 DCAF1Q9Y4B6 1507 aa26.99■■□□□ 1.91
ABCA2-217ENST00000479446 ANP32AP39687 249 aaKnown RBP26.95■■□□□ 1.91
ABCA2-217ENST00000479446 ARID3CA6NKF2 412 aa26.89■■□□□ 1.9
ABCA2-217ENST00000479446 NEFMP07197 916 aa26.87■■□□□ 1.89
ABCA2-217ENST00000479446 TONSLQ96HA7 1378 aa26.84■■□□□ 1.89
ABCA2-217ENST00000479446 FKBP8Q14318 412 aa26.83■■□□□ 1.89
ABCA2-217ENST00000479446 ZNF777Q9ULD5 760 aaPredicted RBP26.82■■□□□ 1.88
ABCA2-217ENST00000479446 HNRNPUQ00839 825 aaKnown RBP eCLIP26.73■■□□□ 1.87
ABCA2-217ENST00000479446 NPM2Q86SE8 214 aaKnown RBP26.72■■□□□ 1.87
ABCA2-217ENST00000479446 DDX10Q13206 875 aaKnown RBP26.72■■□□□ 1.87
ABCA2-217ENST00000479446 BCL11AQ9H165 835 aa26.72■■□□□ 1.87
ABCA2-217ENST00000479446 ZCCHC6Q5VYS8 1495 aaKnown RBP26.7■■□□□ 1.87
ABCA2-217ENST00000479446 SLC24A1O60721 1099 aa26.67■■□□□ 1.86
ABCA2-217ENST00000479446 SCRIBQ14160 1630 aa26.67■■□□□ 1.86
ABCA2-217ENST00000479446 FAM9BQ8IZU0 186 aa26.61■■□□□ 1.85
ABCA2-217ENST00000479446 UPF2Q9HAU5 1272 aaKnown RBP26.47■■□□□ 1.83
ABCA2-217ENST00000479446 TMC1Q8TDI8 760 aa26.46■■□□□ 1.83
ABCA2-217ENST00000479446 CCDC136Q96JN2 1154 aa26.44■■□□□ 1.82
ABCA2-217ENST00000479446 CHIC2Q9UKJ5 165 aa26.43■■□□□ 1.82
ABCA2-217ENST00000479446 MIER1Q8N108 512 aa26.42■■□□□ 1.82
ABCA2-217ENST00000479446 ANP32BQ92688 251 aaKnown RBP26.41■■□□□ 1.82
ABCA2-217ENST00000479446 HSP90AA1P07900 732 aaKnown RBP26.41■■□□□ 1.82
ABCA2-217ENST00000479446 SALL2Q9Y467 1007 aaPredicted RBP26.39■■□□□ 1.82
ABCA2-217ENST00000479446 SCAF1Q9H7N4 1312 aaKnown RBP26.39■■□□□ 1.82
ABCA2-217ENST00000479446 CHGAP10645 457 aaKnown RBP26.39■■□□□ 1.82
ABCA2-217ENST00000479446 MRS2Q9HD23 443 aa26.38■■□□□ 1.81
ABCA2-217ENST00000479446 CLIP1P30622 1438 aa26.36■■□□□ 1.81
ABCA2-217ENST00000479446 GOLGA6L2Q8N9W4 650 aaPredicted RBP26.35■■□□□ 1.81
ABCA2-217ENST00000479446 MTUS2Q5JR59 1369 aa26.32■■□□□ 1.8
ABCA2-217ENST00000479446 EIF5BO60841 1220 aaKnown RBP26.29■■□□□ 1.8
ABCA2-217ENST00000479446 ESF1Q9H501 851 aaKnown RBP26.29■■□□□ 1.8
ABCA2-217ENST00000479446 STAG3Q9UJ98 1225 aa26.27■■□□□ 1.8
ABCA2-217ENST00000479446 WDR43Q15061 677 aaKnown RBP eCLIP26.26■■□□□ 1.79
ABCA2-217ENST00000479446 TSPY4P0CV99 314 aa26.26■■□□□ 1.79
ABCA2-217ENST00000479446 TSPY10P0CW01 314 aa26.26■■□□□ 1.79
ABCA2-217ENST00000479446 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.24■■□□□ 1.791e-7■□□□□ 10
ABCA2-217ENST00000479446 EIF4G2P78344 907 aaKnown RBP eCLIP26.22■■□□□ 1.79
ABCA2-217ENST00000479446 NBR1Q14596 966 aa26.21■■□□□ 1.79
ABCA2-217ENST00000479446 KDM2AQ9Y2K7 1162 aa26.2■■□□□ 1.78
ABCA2-217ENST00000479446 EEA1Q15075 1411 aa26.2■■□□□ 1.78
ABCA2-217ENST00000479446 HIRIP3Q9BW71 556 aaPredicted RBP26.19■■□□□ 1.78
ABCA2-217ENST00000479446 MYO15BQ96JP2 1530 aa26.17■■□□□ 1.78
ABCA2-217ENST00000479446 IRX6P78412 446 aaPredicted RBP26.16■■□□□ 1.78
ABCA2-217ENST00000479446 NPM1P06748 294 aaKnown RBP eCLIP26.15■■□□□ 1.78
ABCA2-217ENST00000479446 CEP162Q5TB80 1403 aa26.14■■□□□ 1.78
ABCA2-217ENST00000479446 GOLGA3Q08378 1498 aa26.13■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms